Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.02□□□□□ -2.41
COL4A5P29400 MT-TN-201ENST00000387400 73 ntBASIC-0.02□□□□□ -2.41
COL4A5P29400 SNORA40.8-201ENST00000411034 126 ntBASIC-0.02□□□□□ -2.41
COL4A5P29400 SNORD71-201ENST00000411292 86 ntBASIC-0.02□□□□□ -2.41
COL4A5P29400 PDCL2P1-201ENST00000419302 352 ntBASIC-0.02□□□□□ -2.41
COL4A5P29400 SNORD57-201ENST00000448188 72 ntBASIC-0.02□□□□□ -2.41
COL4A5P29400 RNU7-187P-201ENST00000458985 68 ntBASIC-0.02□□□□□ -2.41
COL4A5P29400 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.02□□□□□ -2.41
COL4A5P29400 AC069113.3-201ENST00000521019 150 ntBASIC-0.02□□□□□ -2.41
COL4A5P29400 MIR4528-201ENST00000577763 90 ntBASIC-0.02□□□□□ -2.41
COL4A5P29400 AC006380.1-201ENST00000603598 186 ntBASIC-0.02□□□□□ -2.41
COL4A5P29400 RNU6-94P-201ENST00000607728 107 ntBASIC-0.02□□□□□ -2.41
COL4A5P29400 RNU6-254P-201ENST00000363377 107 ntBASIC-0.03□□□□□ -2.41
COL4A5P29400 SNORD113-7-201ENST00000363762 77 ntBASIC-0.03□□□□□ -2.41
COL4A5P29400 SNORD114-9-201ENST00000364370 72 ntBASIC-0.03□□□□□ -2.41
COL4A5P29400 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.03□□□□□ -2.41
COL4A5P29400 RNU6-38P-201ENST00000384085 107 ntBASIC-0.03□□□□□ -2.41
COL4A5P29400 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.03□□□□□ -2.41
COL4A5P29400 SNORD38C-201ENST00000384381 69 ntBASIC-0.03□□□□□ -2.41
COL4A5P29400 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.03□□□□□ -2.41
COL4A5P29400 MIR573-201ENST00000384964 99 ntBASIC-0.03□□□□□ -2.41
COL4A5P29400 MIR517A-201ENST00000385001 87 ntBASIC-0.03□□□□□ -2.41
COL4A5P29400 RNU6-159P-201ENST00000391080 106 ntBASIC-0.03□□□□□ -2.41
COL4A5P29400 AL139396.1-201ENST00000421137 167 ntBASIC-0.03□□□□□ -2.41
COL4A5P29400 AC018865.2-201ENST00000423631 129 ntBASIC-0.03□□□□□ -2.41
COL4A5P29400 MTCO3P10-201ENST00000455912 772 ntBASIC-0.03□□□□□ -2.41
COL4A5P29400 RNU6-1208P-201ENST00000459588 107 ntBASIC-0.03□□□□□ -2.41
COL4A5P29400 AL355375.2-201ENST00000574825 175 ntBASIC-0.03□□□□□ -2.41
COL4A5P29400 AP000753.3-201ENST00000604083 169 ntBASIC-0.03□□□□□ -2.41
COL4A5P29400 AC092954.2-201ENST00000609103 430 ntBASIC-0.03□□□□□ -2.41
COL4A5P29400 AC092807.2-201ENST00000609367 243 ntBASIC-0.03□□□□□ -2.41
COL4A5P29400 AC007684.1-201ENST00000609671 477 ntBASIC-0.03□□□□□ -2.41
COL4A5P29400 AL008636.1-201ENST00000625038 1018 ntBASIC-0.03□□□□□ -2.41
COL4A5P29400 U6.115-201ENST00000636045 103 ntBASIC-0.03□□□□□ -2.41
COL4A5P29400 RNA5SP48-201ENST00000363969 126 ntBASIC-0.04□□□□□ -2.42
COL4A5P29400 RNU6-553P-201ENST00000364047 96 ntBASIC-0.04□□□□□ -2.42
COL4A5P29400 RNU6-613P-201ENST00000410412 108 ntBASIC-0.04□□□□□ -2.42
COL4A5P29400 ELOCP21-201ENST00000412558 336 ntBASIC-0.04□□□□□ -2.42
COL4A5P29400 AL354751.2-201ENST00000415471 210 ntBASIC-0.04□□□□□ -2.42
COL4A5P29400 AC092447.3-201ENST00000426027 686 ntBASIC-0.04□□□□□ -2.42
COL4A5P29400 AC073261.1-201ENST00000429409 121 ntBASIC-0.04□□□□□ -2.42
COL4A5P29400 AL137792.2-201ENST00000443484 235 ntBASIC-0.04□□□□□ -2.42
COL4A5P29400 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.04□□□□□ -2.42
COL4A5P29400 SUMO1P2-201ENST00000452524 304 ntBASIC-0.04□□□□□ -2.42
COL4A5P29400 AC079354.2-201ENST00000453523 154 ntBASIC-0.04□□□□□ -2.42
COL4A5P29400 RNU7-56P-201ENST00000458744 62 ntBASIC-0.04□□□□□ -2.42
COL4A5P29400 CCDC34P1-201ENST00000507441 517 ntBASIC-0.04□□□□□ -2.42
COL4A5P29400 MTND2P38-201ENST00000522536 667 ntBASIC-0.04□□□□□ -2.42
COL4A5P29400 AC022616.4-201ENST00000522985 181 ntBASIC-0.04□□□□□ -2.42
COL4A5P29400 MIR3678-201ENST00000578455 94 ntBASIC-0.04□□□□□ -2.42
COL4A5P29400 AC027449.1-201ENST00000608890 407 ntBASIC-0.04□□□□□ -2.42
COL4A5P29400 AC109347.2-201ENST00000610220 349 ntBASIC-0.04□□□□□ -2.42
COL4A5P29400 MIR1295B-201ENST00000636144 60 ntBASIC-0.04□□□□□ -2.42
COL4A5P29400 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.04□□□□□ -2.42
COL4A5P29400 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.05□□□□□ -2.42
COL4A5P29400 RNU6-580P-201ENST00000365159 107 ntBASIC-0.05□□□□□ -2.42
COL4A5P29400 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.05□□□□□ -2.42
COL4A5P29400 MTCO2P33-201ENST00000402100 465 ntBASIC-0.05□□□□□ -2.42
COL4A5P29400 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.05□□□□□ -2.42
COL4A5P29400 RN7SKP164-201ENST00000516138 266 ntBASIC-0.05□□□□□ -2.42
COL4A5P29400 RN7SKP287-201ENST00000516546 266 ntBASIC-0.05□□□□□ -2.42
COL4A5P29400 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-0.05□□□□□ -2.42
COL4A5P29400 AC134698.4-201ENST00000523451 826 ntBASIC-0.05□□□□□ -2.42
COL4A5P29400 AC009094.1-201ENST00000564443 426 ntBASIC-0.05□□□□□ -2.42
COL4A5P29400 uc_338.6-201ENST00000613544 171 ntBASIC-0.05□□□□□ -2.42
COL4A5P29400 MIR4251-201ENST00000635819 61 ntBASIC-0.05□□□□□ -2.42
COL4A5P29400 RNU6-364P-201ENST00000384387 107 ntBASIC-0.05□□□□□ -2.42
COL4A5P29400 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.05□□□□□ -2.42
COL4A5P29400 RNU6-131P-201ENST00000391144 107 ntBASIC-0.05□□□□□ -2.42
COL4A5P29400 MTATP6P19-201ENST00000413797 659 ntBASIC-0.05□□□□□ -2.42
COL4A5P29400 AL358934.1-201ENST00000432346 324 ntBASIC-0.05□□□□□ -2.42
COL4A5P29400 RPL30P10-201ENST00000488148 337 ntBASIC-0.05□□□□□ -2.42
COL4A5P29400 SCARNA8-201ENST00000515924 131 ntBASIC-0.05□□□□□ -2.42
COL4A5P29400 MIR2115-201ENST00000516657 100 ntBASIC-0.05□□□□□ -2.42
COL4A5P29400 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.05□□□□□ -2.42
COL4A5P29400 RNY1P9-201ENST00000532431 109 ntBASIC-0.05□□□□□ -2.42
COL4A5P29400 AC093023.1-201ENST00000547375 507 ntBASIC-0.05□□□□□ -2.42
COL4A5P29400 RNU6-89P-201ENST00000606519 100 ntBASIC-0.05□□□□□ -2.42
COL4A5P29400 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.05□□□□□ -2.42
COL4A5P29400 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.06□□□□□ -2.42
COL4A5P29400 SNORD114-28-201ENST00000363610 72 ntBASIC-0.06□□□□□ -2.42
COL4A5P29400 Y_RNA.373-201ENST00000365600 103 ntBASIC-0.06□□□□□ -2.42
COL4A5P29400 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.06□□□□□ -2.42
COL4A5P29400 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
COL4A5P29400 SNORA26.8-201ENST00000391306 124 ntBASIC-0.06□□□□□ -2.42
COL4A5P29400 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.06□□□□□ -2.42
COL4A5P29400 AL365203.2-201ENST00000423444 196 ntBASIC-0.06□□□□□ -2.42
COL4A5P29400 AL590632.1-201ENST00000424289 371 ntBASIC-0.06□□□□□ -2.42
COL4A5P29400 SNORD123-201ENST00000459473 70 ntBASIC-0.06□□□□□ -2.42
COL4A5P29400 AC091179.3-201ENST00000474761 144 ntBASIC-0.06□□□□□ -2.42
COL4A5P29400 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.06□□□□□ -2.42
COL4A5P29400 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.06□□□□□ -2.42
COL4A5P29400 AC018710.1-201ENST00000506509 158 ntBASIC-0.06□□□□□ -2.42
COL4A5P29400 SNORD45.4-201ENST00000516629 73 ntBASIC-0.06□□□□□ -2.42
COL4A5P29400 MIR3612-201ENST00000579753 87 ntBASIC-0.06□□□□□ -2.42
COL4A5P29400 MIR4804-201ENST00000581683 73 ntBASIC-0.06□□□□□ -2.42
COL4A5P29400 RNU6-654P-201ENST00000364373 107 ntBASIC-0.07□□□□□ -2.42
COL4A5P29400 RNU6-514P-201ENST00000384208 107 ntBASIC-0.07□□□□□ -2.42
COL4A5P29400 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.07□□□□□ -2.42
COL4A5P29400 MIR601-201ENST00000385256 79 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms