Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 DEFB122-202ENST00000569013 197 ntBASIC1.6□□□□□ -2.15
SHC1P29353 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.6□□□□□ -2.15
SHC1P29353 AC084768.2-201ENST00000622736 221 ntBASIC1.6□□□□□ -2.15
SHC1P29353 Y_RNA.200-201ENST00000364018 102 ntBASIC1.59□□□□□ -2.15
SHC1P29353 Y_RNA.287-201ENST00000364853 94 ntBASIC1.59□□□□□ -2.15
SHC1P29353 Y_RNA.368-201ENST00000365547 113 ntBASIC1.59□□□□□ -2.15
SHC1P29353 SNORD116-13-201ENST00000384408 92 ntBASIC1.59□□□□□ -2.15
SHC1P29353 MIR29C-201ENST00000385231 88 ntBASIC1.59□□□□□ -2.15
SHC1P29353 SNORA26.9-201ENST00000391322 122 ntBASIC1.59□□□□□ -2.15
SHC1P29353 MIR873-201ENST00000401120 77 ntBASIC1.59□□□□□ -2.15
SHC1P29353 MIR1298-201ENST00000408783 112 ntBASIC1.59□□□□□ -2.15
SHC1P29353 AL158823.1-201ENST00000418441 478 ntBASIC1.59□□□□□ -2.15
SHC1P29353 MTND5P15-201ENST00000434246 349 ntBASIC1.59□□□□□ -2.15
SHC1P29353 Y_RNA.638-201ENST00000459374 113 ntBASIC1.59□□□□□ -2.15
SHC1P29353 MRPS17P9-201ENST00000511924 393 ntBASIC1.59□□□□□ -2.15
SHC1P29353 AC107393.1-201ENST00000512403 346 ntBASIC1.59□□□□□ -2.15
SHC1P29353 RNU6-1337P-201ENST00000516525 95 ntBASIC1.59□□□□□ -2.15
SHC1P29353 RNU2-34P-201ENST00000516534 121 ntBASIC1.59□□□□□ -2.15
SHC1P29353 AL442067.1-201ENST00000613261 223 ntBASIC1.59□□□□□ -2.15
SHC1P29353 AC245060.5-201ENST00000610778 3293 ntBASIC1.58□□□□□ -2.16
SHC1P29353 SNORD114-7-201ENST00000362520 77 ntBASIC1.58□□□□□ -2.16
SHC1P29353 RNA5SP276-201ENST00000362580 94 ntBASIC1.58□□□□□ -2.16
SHC1P29353 RNU6-1272P-201ENST00000362776 107 ntBASIC1.58□□□□□ -2.16
SHC1P29353 Y_RNA.199-201ENST00000364014 102 ntBASIC1.58□□□□□ -2.16
SHC1P29353 RNU6-1164P-201ENST00000364428 107 ntBASIC1.58□□□□□ -2.16
SHC1P29353 Y_RNA.297-201ENST00000364950 91 ntBASIC1.58□□□□□ -2.16
SHC1P29353 RNU6-407P-201ENST00000365280 104 ntBASIC1.58□□□□□ -2.16
SHC1P29353 Y_RNA.341-201ENST00000365341 102 ntBASIC1.58□□□□□ -2.16
SHC1P29353 RNU6-1248P-201ENST00000391096 64 ntBASIC1.58□□□□□ -2.16
SHC1P29353 RNU6-855P-201ENST00000410395 104 ntBASIC1.58□□□□□ -2.16
SHC1P29353 RNU2-64P-201ENST00000411315 191 ntBASIC1.58□□□□□ -2.16
SHC1P29353 AC024067.1-201ENST00000426199 223 ntBASIC1.58□□□□□ -2.16
SHC1P29353 BTF3P11-201ENST00000426582 477 ntBASIC1.58□□□□□ -2.16
SHC1P29353 MTND2P29-201ENST00000438595 412 ntBASIC1.58□□□□□ -2.16
SHC1P29353 RPS20P10-201ENST00000451209 253 ntBASIC1.58□□□□□ -2.16
SHC1P29353 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.58□□□□□ -2.16
SHC1P29353 RNA5SP20-201ENST00000515976 84 ntBASIC1.58□□□□□ -2.16
SHC1P29353 Y_RNA.679-201ENST00000516416 91 ntBASIC1.58□□□□□ -2.16
SHC1P29353 RNU6-63P-201ENST00000516690 95 ntBASIC1.58□□□□□ -2.16
SHC1P29353 MIR4299-201ENST00000577899 72 ntBASIC1.58□□□□□ -2.16
SHC1P29353 MIR3684-201ENST00000579779 74 ntBASIC1.58□□□□□ -2.16
SHC1P29353 AL159152.1-201ENST00000635019 2587 ntBASIC1.58□□□□□ -2.16
SHC1P29353 Y_RNA.83-201ENST00000363005 113 ntBASIC1.57□□□□□ -2.16
SHC1P29353 Y_RNA.99-201ENST00000363138 105 ntBASIC1.57□□□□□ -2.16
SHC1P29353 U8.7-201ENST00000364940 136 ntBASIC1.57□□□□□ -2.16
SHC1P29353 SNORA72.4-201ENST00000384174 132 ntBASIC1.57□□□□□ -2.16
SHC1P29353 Y_RNA.456-201ENST00000384232 111 ntBASIC1.57□□□□□ -2.16
SHC1P29353 RNU6-710P-201ENST00000410424 105 ntBASIC1.57□□□□□ -2.16
SHC1P29353 AC008134.1-201ENST00000420943 193 ntBASIC1.57□□□□□ -2.16
SHC1P29353 Z98949.2-201ENST00000440996 144 ntBASIC1.57□□□□□ -2.16
SHC1P29353 AC245102.2-201ENST00000448956 180 ntBASIC1.57□□□□□ -2.16
SHC1P29353 SUMO1P2-201ENST00000452524 304 ntBASIC1.57□□□□□ -2.16
SHC1P29353 AC108210.2-201ENST00000503681 201 ntBASIC1.57□□□□□ -2.16
SHC1P29353 RNU6-1041P-201ENST00000516254 102 ntBASIC1.57□□□□□ -2.16
SHC1P29353 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.57□□□□□ -2.16
SHC1P29353 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.57□□□□□ -2.16
SHC1P29353 AC073349.3-201ENST00000617616 186 ntBASIC1.57□□□□□ -2.16
SHC1P29353 AL365265.1-201ENST00000621045 234 ntBASIC1.57□□□□□ -2.16
SHC1P29353 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.57□□□□□ -2.16
SHC1P29353 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
SHC1P29353 RNA5SP363-201ENST00000365072 115 ntBASIC1.56□□□□□ -2.16
SHC1P29353 RNU6-117P-201ENST00000365415 107 ntBASIC1.56□□□□□ -2.16
SHC1P29353 RNU6-47P-201ENST00000383866 107 ntBASIC1.56□□□□□ -2.16
SHC1P29353 Y_RNA.785-201ENST00000384290 109 ntBASIC1.56□□□□□ -2.16
SHC1P29353 RNU6-136P-201ENST00000384663 107 ntBASIC1.56□□□□□ -2.16
SHC1P29353 RNU6-417P-201ENST00000384712 107 ntBASIC1.56□□□□□ -2.16
SHC1P29353 RNA5SP465-201ENST00000391195 109 ntBASIC1.56□□□□□ -2.16
SHC1P29353 AL627390.1-201ENST00000396055 340 ntBASIC1.56□□□□□ -2.16
SHC1P29353 MTCO2P33-201ENST00000402100 465 ntBASIC1.56□□□□□ -2.16
SHC1P29353 RNA5SP511-201ENST00000410487 115 ntBASIC1.56□□□□□ -2.16
SHC1P29353 RPL31P63-201ENST00000422565 375 ntBASIC1.56□□□□□ -2.16
SHC1P29353 HMGN2P34-201ENST00000437647 269 ntBASIC1.56□□□□□ -2.16
SHC1P29353 RPL23AP6-201ENST00000446637 472 ntBASIC1.56□□□□□ -2.16
SHC1P29353 HSPE1P13-201ENST00000451143 297 ntBASIC1.56□□□□□ -2.16
SHC1P29353 RPS26P55-201ENST00000471178 356 ntBASIC1.56□□□□□ -2.16
SHC1P29353 RPS27P22-201ENST00000478056 241 ntBASIC1.56□□□□□ -2.16
SHC1P29353 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.56□□□□□ -2.16
SHC1P29353 AC011406.1-201ENST00000512440 370 ntBASIC1.56□□□□□ -2.16
SHC1P29353 SNORA70.12-201ENST00000516084 153 ntBASIC1.56□□□□□ -2.16
SHC1P29353 RNU6-250P-201ENST00000516958 103 ntBASIC1.56□□□□□ -2.16
SHC1P29353 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.56□□□□□ -2.16
SHC1P29353 MIR5692C2-201ENST00000577959 77 ntBASIC1.56□□□□□ -2.16
SHC1P29353 MIR3169-201ENST00000578032 83 ntBASIC1.56□□□□□ -2.16
SHC1P29353 MIR3618-201ENST00000580330 88 ntBASIC1.56□□□□□ -2.16
SHC1P29353 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.56□□□□□ -2.16
SHC1P29353 AL078604.3-201ENST00000615580 211 ntBASIC1.56□□□□□ -2.16
SHC1P29353 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.56□□□□□ -2.16
SHC1P29353 MIR338-201ENST00000636369 67 ntBASIC1.56□□□□□ -2.16
SHC1P29353 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SHC1P29353 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
SHC1P29353 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SHC1P29353 MIR411-201ENST00000362239 96 ntBASIC1.55□□□□□ -2.16
SHC1P29353 RNA5SP432-201ENST00000362480 116 ntBASIC1.55□□□□□ -2.16
SHC1P29353 RNU6-653P-201ENST00000363074 106 ntBASIC1.55□□□□□ -2.16
SHC1P29353 SNORD115-3-201ENST00000363100 82 ntBASIC1.55□□□□□ -2.16
SHC1P29353 RNU6-271P-201ENST00000363858 105 ntBASIC1.55□□□□□ -2.16
SHC1P29353 RNA5SP493-201ENST00000364115 91 ntBASIC1.55□□□□□ -2.16
SHC1P29353 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.55□□□□□ -2.16
SHC1P29353 RNA5SP467-201ENST00000391274 118 ntBASIC1.55□□□□□ -2.16
SHC1P29353 AL117342.1-201ENST00000404861 406 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms