Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SNORA22C-201ENST00000384614 134 ntBASIC0.98□□□□□ -2.25
PTPN6P29350 RNU6-1105P-201ENST00000384774 107 ntBASIC0.98□□□□□ -2.25
PTPN6P29350 MIR628-201ENST00000385229 95 ntBASIC0.98□□□□□ -2.25
PTPN6P29350 SNORD12-201ENST00000391002 90 ntBASIC0.98□□□□□ -2.25
PTPN6P29350 SNORD78.2-201ENST00000391076 69 ntBASIC0.98□□□□□ -2.25
PTPN6P29350 AL031003.1-201ENST00000404229 172 ntBASIC0.98□□□□□ -2.25
PTPN6P29350 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.98□□□□□ -2.25
PTPN6P29350 AL162725.1-201ENST00000435405 301 ntBASIC0.98□□□□□ -2.25
PTPN6P29350 CYCTP-201ENST00000504253 315 ntBASIC0.98□□□□□ -2.25
PTPN6P29350 RNA5SP220-201ENST00000516298 104 ntBASIC0.98□□□□□ -2.25
PTPN6P29350 AC055872.1-201ENST00000570978 278 ntBASIC0.98□□□□□ -2.25
PTPN6P29350 FAM106DP-201ENST00000586416 501 ntBASIC0.98□□□□□ -2.25
PTPN6P29350 AC005176.2-201ENST00000596933 147 ntBASIC0.98□□□□□ -2.25
PTPN6P29350 AC120024.3-201ENST00000603167 156 ntBASIC0.98□□□□□ -2.25
PTPN6P29350 RNU6-833P-201ENST00000363486 107 ntBASIC0.97□□□□□ -2.25
PTPN6P29350 SNORD114-27-201ENST00000363766 70 ntBASIC0.97□□□□□ -2.25
PTPN6P29350 RNU6-324P-201ENST00000363957 106 ntBASIC0.97□□□□□ -2.25
PTPN6P29350 RNU6-1080P-201ENST00000383982 107 ntBASIC0.97□□□□□ -2.25
PTPN6P29350 RNU6-42P-201ENST00000384165 107 ntBASIC0.97□□□□□ -2.25
PTPN6P29350 MIR19B1-201ENST00000384829 87 ntBASIC0.97□□□□□ -2.25
PTPN6P29350 MIR489-201ENST00000384923 84 ntBASIC0.97□□□□□ -2.25
PTPN6P29350 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.97□□□□□ -2.25
PTPN6P29350 MTCO3P10-201ENST00000455912 772 ntBASIC0.97□□□□□ -2.25
PTPN6P29350 LINC01399-202ENST00000458450 244 ntBASIC0.97□□□□□ -2.25
PTPN6P29350 Y_RNA.101-201ENST00000363154 102 ntBASIC0.96□□□□□ -2.26
PTPN6P29350 RNU6-20P-201ENST00000384106 107 ntBASIC0.96□□□□□ -2.26
PTPN6P29350 Y_RNA.474-201ENST00000384341 102 ntBASIC0.96□□□□□ -2.26
PTPN6P29350 RNU6-1297P-201ENST00000384415 104 ntBASIC0.96□□□□□ -2.26
PTPN6P29350 RNU2-54P-201ENST00000410299 190 ntBASIC0.96□□□□□ -2.26
PTPN6P29350 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.96□□□□□ -2.26
PTPN6P29350 MRPS18CP6-201ENST00000423587 223 ntBASIC0.96□□□□□ -2.26
PTPN6P29350 PIGPP3-201ENST00000425307 415 ntBASIC0.96□□□□□ -2.26
PTPN6P29350 RPEP5-201ENST00000441137 268 ntBASIC0.96□□□□□ -2.26
PTPN6P29350 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.96□□□□□ -2.26
PTPN6P29350 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.96□□□□□ -2.26
PTPN6P29350 AC240442.1-201ENST00000616055 283 ntBASIC0.96□□□□□ -2.26
PTPN6P29350 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.96□□□□□ -2.26
PTPN6P29350 AC027279.3-201ENST00000625055 122 ntBASIC0.96□□□□□ -2.26
PTPN6P29350 RNU6-626P-201ENST00000363354 107 ntBASIC0.95□□□□□ -2.26
PTPN6P29350 RNU4-38P-201ENST00000364472 129 ntBASIC0.95□□□□□ -2.26
PTPN6P29350 Y_RNA.259-201ENST00000364619 101 ntBASIC0.95□□□□□ -2.26
PTPN6P29350 AC138393.2-201ENST00000414742 246 ntBASIC0.95□□□□□ -2.26
PTPN6P29350 POLR2J4-204ENST00000418424 324 ntBASIC0.95□□□□□ -2.26
PTPN6P29350 AC063976.4-201ENST00000421971 163 ntBASIC0.95□□□□□ -2.26
PTPN6P29350 AC099799.1-201ENST00000439809 192 ntBASIC0.95□□□□□ -2.26
PTPN6P29350 RPS4XP11-201ENST00000446897 772 ntBASIC0.95□□□□□ -2.26
PTPN6P29350 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.95□□□□□ -2.26
PTPN6P29350 RNU6-155P-201ENST00000516347 100 ntBASIC0.95□□□□□ -2.26
PTPN6P29350 AC011604.1-201ENST00000545978 196 ntBASIC0.95□□□□□ -2.26
PTPN6P29350 AL355073.2-201ENST00000612106 557 ntBASIC0.95□□□□□ -2.26
PTPN6P29350 U2.1-201ENST00000618978 145 ntBASIC0.95□□□□□ -2.26
PTPN6P29350 MIR6734-201ENST00000621166 68 ntBASIC0.95□□□□□ -2.26
PTPN6P29350 AC099654.14-201ENST00000638599 341 ntBASIC0.95□□□□□ -2.26
PTPN6P29350 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.95□□□□□ -2.26
PTPN6P29350 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
PTPN6P29350 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
PTPN6P29350 RNU6-490P-201ENST00000362985 107 ntBASIC0.94□□□□□ -2.26
PTPN6P29350 MIR526A1-201ENST00000384897 85 ntBASIC0.94□□□□□ -2.26
PTPN6P29350 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.94□□□□□ -2.26
PTPN6P29350 RNU6-1012P-201ENST00000516606 109 ntBASIC0.94□□□□□ -2.26
PTPN6P29350 SNORA20.3-201ENST00000516880 132 ntBASIC0.94□□□□□ -2.26
PTPN6P29350 MIR4659A-201ENST00000580269 81 ntBASIC0.94□□□□□ -2.26
PTPN6P29350 AC011476.5-201ENST00000615594 130 ntBASIC0.94□□□□□ -2.26
PTPN6P29350 AL591926.4-201ENST00000616895 298 ntBASIC0.94□□□□□ -2.26
PTPN6P29350 MTND4LP32-201ENST00000636111 270 ntBASIC0.94□□□□□ -2.26
PTPN6P29350 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.93□□□□□ -2.26
PTPN6P29350 Y_RNA.384-201ENST00000383909 102 ntBASIC0.93□□□□□ -2.26
PTPN6P29350 Y_RNA.387-201ENST00000383918 102 ntBASIC0.93□□□□□ -2.26
PTPN6P29350 Y_RNA.446-201ENST00000384178 104 ntBASIC0.93□□□□□ -2.26
PTPN6P29350 SNORD116-13-201ENST00000384408 92 ntBASIC0.93□□□□□ -2.26
PTPN6P29350 SNORA80D-201ENST00000384488 135 ntBASIC0.93□□□□□ -2.26
PTPN6P29350 CHEK2P4-201ENST00000450340 246 ntBASIC0.93□□□□□ -2.26
PTPN6P29350 AC114811.1-201ENST00000507207 168 ntBASIC0.93□□□□□ -2.26
PTPN6P29350 SNORD79.1-201ENST00000516069 84 ntBASIC0.93□□□□□ -2.26
PTPN6P29350 SNORD111.1-201ENST00000516421 86 ntBASIC0.93□□□□□ -2.26
PTPN6P29350 RNU6-911P-201ENST00000516523 104 ntBASIC0.93□□□□□ -2.26
PTPN6P29350 RMST_2.1-201ENST00000617263 136 ntBASIC0.93□□□□□ -2.26
PTPN6P29350 Y_RNA.142-201ENST00000363491 102 ntBASIC0.92□□□□□ -2.26
PTPN6P29350 RNU6-1187P-201ENST00000364771 110 ntBASIC0.92□□□□□ -2.26
PTPN6P29350 SNORD114-24-201ENST00000365029 72 ntBASIC0.92□□□□□ -2.26
PTPN6P29350 RNU1-36P-201ENST00000365130 165 ntBASIC0.92□□□□□ -2.26
PTPN6P29350 Y_RNA.363-201ENST00000365529 113 ntBASIC0.92□□□□□ -2.26
PTPN6P29350 MIR520E-201ENST00000384867 87 ntBASIC0.92□□□□□ -2.26
PTPN6P29350 MIR452-201ENST00000385020 85 ntBASIC0.92□□□□□ -2.26
PTPN6P29350 RNU2-61P-201ENST00000411069 191 ntBASIC0.92□□□□□ -2.26
PTPN6P29350 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.92□□□□□ -2.26
PTPN6P29350 AC096644.2-201ENST00000429278 159 ntBASIC0.92□□□□□ -2.26
PTPN6P29350 AC002429.1-201ENST00000437672 148 ntBASIC0.92□□□□□ -2.26
PTPN6P29350 AC022616.4-201ENST00000522985 181 ntBASIC0.92□□□□□ -2.26
PTPN6P29350 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.92□□□□□ -2.26
PTPN6P29350 AC004832.4-201ENST00000608952 331 ntBASIC0.92□□□□□ -2.26
PTPN6P29350 AC122108.2-201ENST00000611946 526 ntBASIC0.92□□□□□ -2.26
PTPN6P29350 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.92□□□□□ -2.26
PTPN6P29350 MIR6767-201ENST00000637302 66 ntBASIC0.92□□□□□ -2.26
PTPN6P29350 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
PTPN6P29350 Y_RNA.230-201ENST00000364348 109 ntBASIC0.91□□□□□ -2.26
PTPN6P29350 Y_RNA.336-201ENST00000365307 109 ntBASIC0.91□□□□□ -2.26
PTPN6P29350 MIR200A-201ENST00000384875 90 ntBASIC0.91□□□□□ -2.26
PTPN6P29350 MIR559-201ENST00000385188 96 ntBASIC0.91□□□□□ -2.26
PTPN6P29350 MLLT10P1-201ENST00000418346 262 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms