Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 Y_RNA.621-201ENST00000411065 96 ntBASIC2.1□□□□□ -2.07
EPHA3P29320 AC245047.4-201ENST00000433189 144 ntBASIC2.1□□□□□ -2.07
EPHA3P29320 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.1□□□□□ -2.07
EPHA3P29320 AL021397.1-201ENST00000451806 248 ntBASIC2.1□□□□□ -2.07
EPHA3P29320 Y_RNA.644-201ENST00000459006 113 ntBASIC2.1□□□□□ -2.07
EPHA3P29320 Y_RNA.674-201ENST00000516362 113 ntBASIC2.1□□□□□ -2.07
EPHA3P29320 MIR4529-201ENST00000578110 78 ntBASIC2.1□□□□□ -2.07
EPHA3P29320 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.1□□□□□ -2.07
EPHA3P29320 Y_RNA.24-201ENST00000362508 103 ntBASIC2.09□□□□□ -2.07
EPHA3P29320 RNU6-1019P-201ENST00000364424 107 ntBASIC2.09□□□□□ -2.07
EPHA3P29320 RNA5SP160-201ENST00000364866 120 ntBASIC2.09□□□□□ -2.07
EPHA3P29320 RNU6-47P-201ENST00000383866 107 ntBASIC2.09□□□□□ -2.07
EPHA3P29320 MIR520G-201ENST00000385064 90 ntBASIC2.09□□□□□ -2.07
EPHA3P29320 SNORA48.1-201ENST00000390879 135 ntBASIC2.09□□□□□ -2.07
EPHA3P29320 HMGN2P38-201ENST00000423806 265 ntBASIC2.09□□□□□ -2.07
EPHA3P29320 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.09□□□□□ -2.07
EPHA3P29320 SNORA81.3-201ENST00000517283 198 ntBASIC2.09□□□□□ -2.07
EPHA3P29320 MIR4448-201ENST00000584360 86 ntBASIC2.09□□□□□ -2.07
EPHA3P29320 AC022217.4-201ENST00000604389 163 ntBASIC2.09□□□□□ -2.07
EPHA3P29320 Y_RNA.802-201ENST00000614892 130 ntBASIC2.09□□□□□ -2.07
EPHA3P29320 AC012640.5-201ENST00000623897 319 ntBASIC2.09□□□□□ -2.07
EPHA3P29320 CTSLP2-204ENST00000629029 392 ntBASIC2.09□□□□□ -2.07
EPHA3P29320 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.09□□□□□ -2.08
EPHA3P29320 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
EPHA3P29320 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
EPHA3P29320 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
EPHA3P29320 MIR367-201ENST00000362299 68 ntBASIC2.08□□□□□ -2.08
EPHA3P29320 RNU6-144P-201ENST00000383951 107 ntBASIC2.08□□□□□ -2.08
EPHA3P29320 RNU6-1080P-201ENST00000383982 107 ntBASIC2.08□□□□□ -2.08
EPHA3P29320 SNORA8.3-201ENST00000384679 139 ntBASIC2.08□□□□□ -2.08
EPHA3P29320 MT-TR-201ENST00000387439 65 ntBASIC2.08□□□□□ -2.08
EPHA3P29320 MIR1278-201ENST00000408753 81 ntBASIC2.08□□□□□ -2.08
EPHA3P29320 Y_RNA.793-201ENST00000411222 111 ntBASIC2.08□□□□□ -2.08
EPHA3P29320 AL138752.1-201ENST00000452964 351 ntBASIC2.08□□□□□ -2.08
EPHA3P29320 RNU6-437P-201ENST00000459408 95 ntBASIC2.08□□□□□ -2.08
EPHA3P29320 AC025033.1-201ENST00000463883 194 ntBASIC2.08□□□□□ -2.08
EPHA3P29320 RNA5SP281-201ENST00000516504 135 ntBASIC2.08□□□□□ -2.08
EPHA3P29320 RNU6-341P-201ENST00000516973 96 ntBASIC2.08□□□□□ -2.08
EPHA3P29320 RNU2-19P-201ENST00000517288 84 ntBASIC2.08□□□□□ -2.08
EPHA3P29320 AC022559.1-201ENST00000520905 205 ntBASIC2.08□□□□□ -2.08
EPHA3P29320 CBX3P4-201ENST00000538909 354 ntBASIC2.08□□□□□ -2.08
EPHA3P29320 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.08□□□□□ -2.08
EPHA3P29320 MIR4308-201ENST00000580634 81 ntBASIC2.08□□□□□ -2.08
EPHA3P29320 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.08□□□□□ -2.08
EPHA3P29320 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.08□□□□□ -2.08
EPHA3P29320 AC100821.1-201ENST00000523153 2479 ntBASIC2.08□□□□□ -2.08
EPHA3P29320 Y_RNA.29-201ENST00000362570 113 ntBASIC2.07□□□□□ -2.08
EPHA3P29320 RNU6-969P-201ENST00000383900 105 ntBASIC2.07□□□□□ -2.08
EPHA3P29320 RNU4-52P-201ENST00000384209 138 ntBASIC2.07□□□□□ -2.08
EPHA3P29320 MIR626-201ENST00000385032 94 ntBASIC2.07□□□□□ -2.08
EPHA3P29320 SNORA48.3-201ENST00000391081 134 ntBASIC2.07□□□□□ -2.08
EPHA3P29320 RNU11-5P-201ENST00000391216 129 ntBASIC2.07□□□□□ -2.08
EPHA3P29320 COX6CP10-201ENST00000416832 224 ntBASIC2.07□□□□□ -2.08
EPHA3P29320 Z98949.2-201ENST00000440996 144 ntBASIC2.07□□□□□ -2.08
EPHA3P29320 RPS27P1-201ENST00000450552 247 ntBASIC2.07□□□□□ -2.08
EPHA3P29320 AC055731.1-201ENST00000474387 401 ntBASIC2.07□□□□□ -2.08
EPHA3P29320 RNA5SP200-201ENST00000516360 103 ntBASIC2.07□□□□□ -2.08
EPHA3P29320 RNU1-40P-201ENST00000516816 164 ntBASIC2.07□□□□□ -2.08
EPHA3P29320 RNU1-97P-201ENST00000516872 164 ntBASIC2.07□□□□□ -2.08
EPHA3P29320 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
EPHA3P29320 MIR4724-201ENST00000579485 89 ntBASIC2.07□□□□□ -2.08
EPHA3P29320 Z83818.1-201ENST00000603584 150 ntBASIC2.07□□□□□ -2.08
EPHA3P29320 MIR203B-201ENST00000636080 86 ntBASIC2.07□□□□□ -2.08
EPHA3P29320 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
EPHA3P29320 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
EPHA3P29320 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
EPHA3P29320 RNU6-1020P-201ENST00000363684 107 ntBASIC2.06□□□□□ -2.08
EPHA3P29320 RNU4-17P-201ENST00000365598 141 ntBASIC2.06□□□□□ -2.08
EPHA3P29320 Y_RNA.785-201ENST00000384290 109 ntBASIC2.06□□□□□ -2.08
EPHA3P29320 RNA5SP508-201ENST00000411327 119 ntBASIC2.06□□□□□ -2.08
EPHA3P29320 AC245047.3-201ENST00000429428 127 ntBASIC2.06□□□□□ -2.08
EPHA3P29320 RNU7-94P-201ENST00000459576 63 ntBASIC2.06□□□□□ -2.08
EPHA3P29320 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.06□□□□□ -2.08
EPHA3P29320 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.06□□□□□ -2.08
EPHA3P29320 Y_RNA.700-201ENST00000516806 100 ntBASIC2.06□□□□□ -2.08
EPHA3P29320 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.06□□□□□ -2.08
EPHA3P29320 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.06□□□□□ -2.08
EPHA3P29320 SUB1P4-201ENST00000566062 339 ntBASIC2.06□□□□□ -2.08
EPHA3P29320 SNORD53-201ENST00000579969 78 ntBASIC2.06□□□□□ -2.08
EPHA3P29320 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.06□□□□□ -2.08
EPHA3P29320 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
EPHA3P29320 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
EPHA3P29320 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
EPHA3P29320 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
EPHA3P29320 SNORA1B-201ENST00000362535 133 ntBASIC2.05□□□□□ -2.08
EPHA3P29320 RNA5SP276-201ENST00000362580 94 ntBASIC2.05□□□□□ -2.08
EPHA3P29320 snoU2_19.4-201ENST00000364329 80 ntBASIC2.05□□□□□ -2.08
EPHA3P29320 SNORA16B-201ENST00000364674 135 ntBASIC2.05□□□□□ -2.08
EPHA3P29320 MIR526A2-201ENST00000390198 65 ntBASIC2.05□□□□□ -2.08
EPHA3P29320 RNU6-918P-201ENST00000391219 106 ntBASIC2.05□□□□□ -2.08
EPHA3P29320 RNU2-64P-201ENST00000411315 191 ntBASIC2.05□□□□□ -2.08
EPHA3P29320 MTND2P29-201ENST00000438595 412 ntBASIC2.05□□□□□ -2.08
EPHA3P29320 AC107393.1-201ENST00000512403 346 ntBASIC2.05□□□□□ -2.08
EPHA3P29320 SCARNA16.3-201ENST00000516595 184 ntBASIC2.05□□□□□ -2.08
EPHA3P29320 AP002392.1-201ENST00000537692 208 ntBASIC2.05□□□□□ -2.08
EPHA3P29320 MIR5694-201ENST00000581190 76 ntBASIC2.05□□□□□ -2.08
EPHA3P29320 AC002984.1-201ENST00000591692 448 ntBASIC2.05□□□□□ -2.08
EPHA3P29320 AC004792.1-201ENST00000614523 137 ntBASIC2.05□□□□□ -2.08
EPHA3P29320 MIR6132-201ENST00000622083 109 ntBASIC2.05□□□□□ -2.08
EPHA3P29320 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms