Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 MTCO2P12-201ENST00000427426 682 ntBASIC1.24□□□□□ -2.21
RPA1P27694 FCF1P4-201ENST00000448326 183 ntBASIC1.24□□□□□ -2.21
RPA1P27694 RPL39P38-201ENST00000467018 153 ntBASIC1.24□□□□□ -2.21
RPA1P27694 RPS27P22-201ENST00000478056 241 ntBASIC1.24□□□□□ -2.21
RPA1P27694 AC097462.1-201ENST00000514125 324 ntBASIC1.24□□□□□ -2.21
RPA1P27694 RNU6-1053P-201ENST00000515930 101 ntBASIC1.24□□□□□ -2.21
RPA1P27694 RNA5SP20-201ENST00000515976 84 ntBASIC1.24□□□□□ -2.21
RPA1P27694 RNU6-436P-201ENST00000516171 114 ntBASIC1.24□□□□□ -2.21
RPA1P27694 RNU6-911P-201ENST00000516523 104 ntBASIC1.24□□□□□ -2.21
RPA1P27694 Y_RNA.711-201ENST00000516993 102 ntBASIC1.24□□□□□ -2.21
RPA1P27694 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
RPA1P27694 AC040926.1-201ENST00000530195 238 ntBASIC1.24□□□□□ -2.21
RPA1P27694 MIR3145-201ENST00000580727 82 ntBASIC1.24□□□□□ -2.21
RPA1P27694 RAC1P9-201ENST00000604990 392 ntBASIC1.24□□□□□ -2.21
RPA1P27694 MIR8054-201ENST00000620877 86 ntBASIC1.24□□□□□ -2.21
RPA1P27694 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
RPA1P27694 Y_RNA.460-201ENST00000384255 102 ntBASIC1.23□□□□□ -2.21
RPA1P27694 RNU6-102P-201ENST00000384485 104 ntBASIC1.23□□□□□ -2.21
RPA1P27694 MIR628-201ENST00000385229 95 ntBASIC1.23□□□□□ -2.21
RPA1P27694 RNU6-823P-201ENST00000391042 103 ntBASIC1.23□□□□□ -2.21
RPA1P27694 SNORD78.2-201ENST00000391076 69 ntBASIC1.23□□□□□ -2.21
RPA1P27694 RNA5SP475-201ENST00000410568 110 ntBASIC1.23□□□□□ -2.21
RPA1P27694 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.23□□□□□ -2.21
RPA1P27694 Y_RNA.631-201ENST00000459607 101 ntBASIC1.23□□□□□ -2.21
RPA1P27694 AC091021.1-201ENST00000468051 388 ntBASIC1.23□□□□□ -2.21
RPA1P27694 AC098869.1-201ENST00000481627 292 ntBASIC1.23□□□□□ -2.21
RPA1P27694 AC010598.1-201ENST00000510378 103 ntBASIC1.23□□□□□ -2.21
RPA1P27694 RNU6-1170P-201ENST00000515974 106 ntBASIC1.23□□□□□ -2.21
RPA1P27694 RN7SKP88-201ENST00000516847 250 ntBASIC1.23□□□□□ -2.21
RPA1P27694 MIR3684-201ENST00000579779 74 ntBASIC1.23□□□□□ -2.21
RPA1P27694 AC091178.2-201ENST00000584401 117 ntBASIC1.23□□□□□ -2.21
RPA1P27694 7SK.8-201ENST00000612110 250 ntBASIC1.23□□□□□ -2.21
RPA1P27694 7SK.11-201ENST00000615477 250 ntBASIC1.23□□□□□ -2.21
RPA1P27694 AL513423.1-201ENST00000621695 132 ntBASIC1.23□□□□□ -2.21
RPA1P27694 7SK.13-201ENST00000622040 250 ntBASIC1.23□□□□□ -2.21
RPA1P27694 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
RPA1P27694 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
RPA1P27694 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
RPA1P27694 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
RPA1P27694 AC068700.1-201ENST00000565862 3754 ntBASIC1.22□□□□□ -2.21
RPA1P27694 Y_RNA.28-201ENST00000362554 111 ntBASIC1.22□□□□□ -2.21
RPA1P27694 RNU6-1175P-201ENST00000365200 107 ntBASIC1.22□□□□□ -2.21
RPA1P27694 Y_RNA.527-201ENST00000384573 102 ntBASIC1.22□□□□□ -2.21
RPA1P27694 Y_RNA.570-201ENST00000384750 101 ntBASIC1.22□□□□□ -2.21
RPA1P27694 AL031003.1-201ENST00000404229 172 ntBASIC1.22□□□□□ -2.21
RPA1P27694 MIR1302-11-201ENST00000408051 138 ntBASIC1.22□□□□□ -2.21
RPA1P27694 MIR1302-9-201ENST00000408365 138 ntBASIC1.22□□□□□ -2.21
RPA1P27694 MIR1302-10-201ENST00000408734 138 ntBASIC1.22□□□□□ -2.21
RPA1P27694 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.22□□□□□ -2.21
RPA1P27694 SNORA25.10-201ENST00000515926 124 ntBASIC1.22□□□□□ -2.21
RPA1P27694 SNORA40.14-201ENST00000516543 86 ntBASIC1.22□□□□□ -2.21
RPA1P27694 MIR2355-201ENST00000517199 87 ntBASIC1.22□□□□□ -2.21
RPA1P27694 CYCSP23-201ENST00000519781 313 ntBASIC1.22□□□□□ -2.21
RPA1P27694 MIR4423-201ENST00000580922 80 ntBASIC1.22□□□□□ -2.21
RPA1P27694 MIR1302-2-201ENST00000607096 138 ntBASIC1.22□□□□□ -2.21
RPA1P27694 AC134503.1-201ENST00000633048 54 ntBASIC1.22□□□□□ -2.21
RPA1P27694 AC005592.1-201ENST00000566527 1640 ntBASIC1.22□□□□□ -2.21
RPA1P27694 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
RPA1P27694 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
RPA1P27694 RNA5SP327-201ENST00000362494 101 ntBASIC1.21□□□□□ -2.22
RPA1P27694 Y_RNA.39-201ENST00000362620 98 ntBASIC1.21□□□□□ -2.22
RPA1P27694 RNU6-694P-201ENST00000364071 147 ntBASIC1.21□□□□□ -2.22
RPA1P27694 Y_RNA.471-201ENST00000384312 102 ntBASIC1.21□□□□□ -2.22
RPA1P27694 MIR215-201ENST00000384858 110 ntBASIC1.21□□□□□ -2.22
RPA1P27694 MIR548P-201ENST00000408336 84 ntBASIC1.21□□□□□ -2.22
RPA1P27694 RNU2-54P-201ENST00000410299 190 ntBASIC1.21□□□□□ -2.22
RPA1P27694 RNA5SP511-201ENST00000410487 115 ntBASIC1.21□□□□□ -2.22
RPA1P27694 AC245047.3-201ENST00000429428 127 ntBASIC1.21□□□□□ -2.22
RPA1P27694 U8.20-201ENST00000459445 131 ntBASIC1.21□□□□□ -2.22
RPA1P27694 RNU6-155P-201ENST00000516347 100 ntBASIC1.21□□□□□ -2.22
RPA1P27694 RNU6-1291P-201ENST00000516591 104 ntBASIC1.21□□□□□ -2.22
RPA1P27694 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.21□□□□□ -2.22
RPA1P27694 AC005176.2-201ENST00000596933 147 ntBASIC1.21□□□□□ -2.22
RPA1P27694 AL513534.2-201ENST00000603836 250 ntBASIC1.21□□□□□ -2.22
RPA1P27694 SNORA28-201ENST00000606769 126 ntBASIC1.21□□□□□ -2.22
RPA1P27694 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.21□□□□□ -2.22
RPA1P27694 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.21□□□□□ -2.22
RPA1P27694 AC010205.1-201ENST00000616668 449 ntBASIC1.21□□□□□ -2.22
RPA1P27694 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.21□□□□□ -2.22
RPA1P27694 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.21□□□□□ -2.22
RPA1P27694 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
RPA1P27694 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.2□□□□□ -2.22
RPA1P27694 Y_RNA.329-201ENST00000365209 107 ntBASIC1.2□□□□□ -2.22
RPA1P27694 RNU6-505P-201ENST00000384427 107 ntBASIC1.2□□□□□ -2.22
RPA1P27694 MIR562-201ENST00000384894 95 ntBASIC1.2□□□□□ -2.22
RPA1P27694 RNU6-440P-201ENST00000390882 105 ntBASIC1.2□□□□□ -2.22
RPA1P27694 AL590004.1-201ENST00000405321 300 ntBASIC1.2□□□□□ -2.22
RPA1P27694 AC113618.1-201ENST00000416747 285 ntBASIC1.2□□□□□ -2.22
RPA1P27694 ELOCP20-201ENST00000422460 345 ntBASIC1.2□□□□□ -2.22
RPA1P27694 RNU6-1337P-201ENST00000516525 95 ntBASIC1.2□□□□□ -2.22
RPA1P27694 RNU7-172P-201ENST00000517125 64 ntBASIC1.2□□□□□ -2.22
RPA1P27694 RNU6-1116P-201ENST00000517269 99 ntBASIC1.2□□□□□ -2.22
RPA1P27694 MIR4680-201ENST00000580906 66 ntBASIC1.2□□□□□ -2.22
RPA1P27694 MIR4295-201ENST00000585286 85 ntBASIC1.2□□□□□ -2.22
RPA1P27694 DEFB117-201ENST00000602356 141 ntBASIC1.2□□□□□ -2.22
RPA1P27694 AC022441.3-201ENST00000605737 136 ntBASIC1.2□□□□□ -2.22
RPA1P27694 RNY1P10-201ENST00000363268 113 ntBASIC1.19□□□□□ -2.22
RPA1P27694 Y_RNA.128-201ENST00000363391 112 ntBASIC1.19□□□□□ -2.22
RPA1P27694 Y_RNA.153-201ENST00000363615 91 ntBASIC1.19□□□□□ -2.22
RPA1P27694 SNORD14.1-201ENST00000365609 90 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms