Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 RPL23AP54-201ENST00000495129 419 ntBASIC1.91□□□□□ -2.1
TNFSF4P23510 OR9P1P-201ENST00000496431 281 ntBASIC1.91□□□□□ -2.1
TNFSF4P23510 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.91□□□□□ -2.1
TNFSF4P23510 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.91□□□□□ -2.1
TNFSF4P23510 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
TNFSF4P23510 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
TNFSF4P23510 RNU6-1272P-201ENST00000362776 107 ntBASIC1.9□□□□□ -2.11
TNFSF4P23510 Y_RNA.483-201ENST00000384380 101 ntBASIC1.9□□□□□ -2.11
TNFSF4P23510 MIR221-201ENST00000385135 110 ntBASIC1.9□□□□□ -2.11
TNFSF4P23510 MT-TW-201ENST00000387382 68 ntBASIC1.9□□□□□ -2.11
TNFSF4P23510 SNORA12.1-201ENST00000390873 148 ntBASIC1.9□□□□□ -2.11
TNFSF4P23510 MTND3P2-201ENST00000438452 342 ntBASIC1.9□□□□□ -2.11
TNFSF4P23510 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TNFSF4P23510 AC090255.1-201ENST00000495779 349 ntBASIC1.9□□□□□ -2.11
TNFSF4P23510 RNA5SP200-201ENST00000516360 103 ntBASIC1.9□□□□□ -2.11
TNFSF4P23510 RNU4-41P-201ENST00000364426 143 ntBASIC1.89□□□□□ -2.11
TNFSF4P23510 RNU6-472P-201ENST00000384299 107 ntBASIC1.89□□□□□ -2.11
TNFSF4P23510 RNU6-763P-201ENST00000390865 106 ntBASIC1.89□□□□□ -2.11
TNFSF4P23510 SNORA48.3-201ENST00000391081 134 ntBASIC1.89□□□□□ -2.11
TNFSF4P23510 SNORA26.5-201ENST00000391215 123 ntBASIC1.89□□□□□ -2.11
TNFSF4P23510 MIR934-201ENST00000401241 83 ntBASIC1.89□□□□□ -2.11
TNFSF4P23510 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.89□□□□□ -2.11
TNFSF4P23510 MIR1273D-201ENST00000577266 86 ntBASIC1.89□□□□□ -2.11
TNFSF4P23510 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.89□□□□□ -2.11
TNFSF4P23510 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.89□□□□□ -2.11
TNFSF4P23510 AC009831.4-201ENST00000620744 325 ntBASIC1.89□□□□□ -2.11
TNFSF4P23510 AC095038.3-201ENST00000634439 195 ntBASIC1.89□□□□□ -2.11
TNFSF4P23510 ICE2P2-201ENST00000483823 2787 ntBASIC1.89□□□□□ -2.11
TNFSF4P23510 ZNF720P1-201ENST00000562403 1939 ntBASIC1.89□□□□□ -2.11
TNFSF4P23510 Y_RNA.44-201ENST00000362676 108 ntBASIC1.88□□□□□ -2.11
TNFSF4P23510 Y_RNA.217-201ENST00000364214 105 ntBASIC1.88□□□□□ -2.11
TNFSF4P23510 RNU6-424P-201ENST00000384367 105 ntBASIC1.88□□□□□ -2.11
TNFSF4P23510 MTCO2P33-201ENST00000402100 465 ntBASIC1.88□□□□□ -2.11
TNFSF4P23510 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.88□□□□□ -2.11
TNFSF4P23510 SNORA36B-201ENST00000410438 131 ntBASIC1.88□□□□□ -2.11
TNFSF4P23510 RNU2-14P-201ENST00000411053 191 ntBASIC1.88□□□□□ -2.11
TNFSF4P23510 HMGN2P38-201ENST00000423806 265 ntBASIC1.88□□□□□ -2.11
TNFSF4P23510 Y_RNA.641-201ENST00000459414 105 ntBASIC1.88□□□□□ -2.11
TNFSF4P23510 U2.14-201ENST00000615943 113 ntBASIC1.88□□□□□ -2.11
TNFSF4P23510 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
TNFSF4P23510 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.87□□□□□ -2.11
TNFSF4P23510 U8.2-201ENST00000363156 134 ntBASIC1.87□□□□□ -2.11
TNFSF4P23510 RNU6-1048P-201ENST00000364054 107 ntBASIC1.87□□□□□ -2.11
TNFSF4P23510 Y_RNA.253-201ENST00000364562 112 ntBASIC1.87□□□□□ -2.11
TNFSF4P23510 Y_RNA.275-201ENST00000364726 110 ntBASIC1.87□□□□□ -2.11
TNFSF4P23510 Y_RNA.288-201ENST00000364854 92 ntBASIC1.87□□□□□ -2.11
TNFSF4P23510 RNA5SP37-201ENST00000365420 130 ntBASIC1.87□□□□□ -2.11
TNFSF4P23510 Y_RNA.396-201ENST00000383949 103 ntBASIC1.87□□□□□ -2.11
TNFSF4P23510 RNU6-144P-201ENST00000383951 107 ntBASIC1.87□□□□□ -2.11
TNFSF4P23510 RNU6-662P-201ENST00000384253 104 ntBASIC1.87□□□□□ -2.11
TNFSF4P23510 MIR660-201ENST00000385235 97 ntBASIC1.87□□□□□ -2.11
TNFSF4P23510 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.87□□□□□ -2.11
TNFSF4P23510 Z98949.2-201ENST00000440996 144 ntBASIC1.87□□□□□ -2.11
TNFSF4P23510 HSPE1P24-201ENST00000450782 238 ntBASIC1.87□□□□□ -2.11
TNFSF4P23510 AC005908.1-201ENST00000468701 347 ntBASIC1.87□□□□□ -2.11
TNFSF4P23510 HMGN1P7-201ENST00000491722 313 ntBASIC1.87□□□□□ -2.11
TNFSF4P23510 RNA5SP168-201ENST00000516642 112 ntBASIC1.87□□□□□ -2.11
TNFSF4P23510 Y_RNA.714-201ENST00000517065 90 ntBASIC1.87□□□□□ -2.11
TNFSF4P23510 MIR2681-201ENST00000581814 105 ntBASIC1.87□□□□□ -2.11
TNFSF4P23510 AL162730.1-201ENST00000605734 292 ntBASIC1.87□□□□□ -2.11
TNFSF4P23510 AL591926.4-201ENST00000616895 298 ntBASIC1.87□□□□□ -2.11
TNFSF4P23510 SNORD33-201ENST00000362761 85 ntBASIC1.86□□□□□ -2.11
TNFSF4P23510 SNORD68-201ENST00000363214 84 ntBASIC1.86□□□□□ -2.11
TNFSF4P23510 RNU6-674P-201ENST00000363831 107 ntBASIC1.86□□□□□ -2.11
TNFSF4P23510 Y_RNA.203-201ENST00000364106 102 ntBASIC1.86□□□□□ -2.11
TNFSF4P23510 U8.5-201ENST00000364528 136 ntBASIC1.86□□□□□ -2.11
TNFSF4P23510 MIR513A1-201ENST00000385138 129 ntBASIC1.86□□□□□ -2.11
TNFSF4P23510 Z98742.3-201ENST00000418637 326 ntBASIC1.86□□□□□ -2.11
TNFSF4P23510 BTF3P11-201ENST00000426582 477 ntBASIC1.86□□□□□ -2.11
TNFSF4P23510 CALM2P4-201ENST00000430810 426 ntBASIC1.86□□□□□ -2.11
TNFSF4P23510 RNU6-437P-201ENST00000459408 95 ntBASIC1.86□□□□□ -2.11
TNFSF4P23510 Y_RNA.637-201ENST00000459424 114 ntBASIC1.86□□□□□ -2.11
TNFSF4P23510 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.86□□□□□ -2.11
TNFSF4P23510 AC015688.6-201ENST00000577737 104 ntBASIC1.86□□□□□ -2.11
TNFSF4P23510 MIR4762-201ENST00000585261 75 ntBASIC1.86□□□□□ -2.11
TNFSF4P23510 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.86□□□□□ -2.11
TNFSF4P23510 AC005357.1-201ENST00000588399 301 ntBASIC1.86□□□□□ -2.11
TNFSF4P23510 AC013791.1-201ENST00000616619 62 ntBASIC1.86□□□□□ -2.11
TNFSF4P23510 SNORD3E-202ENST00000627253 216 ntBASIC1.86□□□□□ -2.11
TNFSF4P23510 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
TNFSF4P23510 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
TNFSF4P23510 AC134026.1-201ENST00000623249 2239 ntBASIC1.85□□□□□ -2.11
TNFSF4P23510 MIR126-201ENST00000362291 85 ntBASIC1.85□□□□□ -2.11
TNFSF4P23510 RNU6-1205P-201ENST00000363625 106 ntBASIC1.85□□□□□ -2.11
TNFSF4P23510 SNORA70B-201ENST00000384210 135 ntBASIC1.85□□□□□ -2.11
TNFSF4P23510 MIR568-201ENST00000385036 95 ntBASIC1.85□□□□□ -2.11
TNFSF4P23510 U8.16-201ENST00000391279 133 ntBASIC1.85□□□□□ -2.11
TNFSF4P23510 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.85□□□□□ -2.11
TNFSF4P23510 JPX_2.1-201ENST00000614161 69 ntBASIC1.85□□□□□ -2.11
TNFSF4P23510 MIR8063-201ENST00000621930 81 ntBASIC1.85□□□□□ -2.11
TNFSF4P23510 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
TNFSF4P23510 RNU6-338P-201ENST00000383888 105 ntBASIC1.84□□□□□ -2.11
TNFSF4P23510 SNORA3.2-201ENST00000408221 125 ntBASIC1.84□□□□□ -2.11
TNFSF4P23510 CYCTP-201ENST00000504253 315 ntBASIC1.84□□□□□ -2.11
TNFSF4P23510 MIR4422-201ENST00000581938 83 ntBASIC1.84□□□□□ -2.11
TNFSF4P23510 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.84□□□□□ -2.11
TNFSF4P23510 AC027279.3-201ENST00000625055 122 ntBASIC1.84□□□□□ -2.11
TNFSF4P23510 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
TNFSF4P23510 MIRLET7C-201ENST00000362160 84 ntBASIC1.83□□□□□ -2.12
TNFSF4P23510 MIR302D-201ENST00000362275 68 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms