Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RPPH1-2P-201ENST00000516688 293 ntBASIC3.4□□□□□ -1.87
RFX1P22670 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.4□□□□□ -1.87
RFX1P22670 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.4□□□□□ -1.87
RFX1P22670 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
RFX1P22670 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
RFX1P22670 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RFX1P22670 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RFX1P22670 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.4□□□□□ -1.87
RFX1P22670 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
RFX1P22670 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.39□□□□□ -1.87
RFX1P22670 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RFX1P22670 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RFX1P22670 SNORA1B-201ENST00000362535 133 ntBASIC3.39□□□□□ -1.87
RFX1P22670 RNU6-915P-201ENST00000364943 103 ntBASIC3.39□□□□□ -1.87
RFX1P22670 SNORA44-201ENST00000384584 132 ntBASIC3.39□□□□□ -1.87
RFX1P22670 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RFX1P22670 SNORA12.1-201ENST00000390873 148 ntBASIC3.39□□□□□ -1.87
RFX1P22670 RNA5SP492-201ENST00000411330 114 ntBASIC3.39□□□□□ -1.87
RFX1P22670 UQCRHP3-201ENST00000451503 251 ntBASIC3.39□□□□□ -1.87
RFX1P22670 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.39□□□□□ -1.87
RFX1P22670 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.39□□□□□ -1.87
RFX1P22670 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.39□□□□□ -1.87
RFX1P22670 RNU6-1333P-201ENST00000516162 93 ntBASIC3.39□□□□□ -1.87
RFX1P22670 AC022202.1-201ENST00000613515 211 ntBASIC3.39□□□□□ -1.87
RFX1P22670 AL591926.4-201ENST00000616895 298 ntBASIC3.39□□□□□ -1.87
RFX1P22670 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RFX1P22670 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RFX1P22670 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFX1P22670 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RFX1P22670 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RFX1P22670 MIR148B-201ENST00000362252 99 ntBASIC3.38□□□□□ -1.87
RFX1P22670 MIR126-201ENST00000362291 85 ntBASIC3.38□□□□□ -1.87
RFX1P22670 Y_RNA.66-201ENST00000362862 102 ntBASIC3.38□□□□□ -1.87
RFX1P22670 RNA5SP126-201ENST00000365092 109 ntBASIC3.38□□□□□ -1.87
RFX1P22670 SNORA7.4-201ENST00000384249 137 ntBASIC3.38□□□□□ -1.87
RFX1P22670 AC107083.1-201ENST00000439643 279 ntBASIC3.38□□□□□ -1.87
RFX1P22670 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.38□□□□□ -1.87
RFX1P22670 RN7SL297P-201ENST00000483161 293 ntBASIC3.38□□□□□ -1.87
RFX1P22670 MRPS17P9-201ENST00000511924 393 ntBASIC3.38□□□□□ -1.87
RFX1P22670 RNU4-57P-201ENST00000515980 135 ntBASIC3.38□□□□□ -1.87
RFX1P22670 AC091544.4-201ENST00000555268 342 ntBASIC3.38□□□□□ -1.87
RFX1P22670 MIR4762-201ENST00000585261 75 ntBASIC3.38□□□□□ -1.87
RFX1P22670 AC008507.4-201ENST00000585464 127 ntBASIC3.38□□□□□ -1.87
RFX1P22670 MIR622-201ENST00000638396 96 ntBASIC3.38□□□□□ -1.87
RFX1P22670 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RFX1P22670 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RFX1P22670 MIR449A-201ENST00000362113 91 ntBASIC3.37□□□□□ -1.87
RFX1P22670 SNORD115-3-201ENST00000363100 82 ntBASIC3.37□□□□□ -1.87
RFX1P22670 RPL21P3-201ENST00000395517 478 ntBASIC3.37□□□□□ -1.87
RFX1P22670 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.37□□□□□ -1.87
RFX1P22670 RPL39P40-201ENST00000445481 146 ntBASIC3.37□□□□□ -1.87
RFX1P22670 RNU6-504P-201ENST00000516568 104 ntBASIC3.37□□□□□ -1.87
RFX1P22670 RNU7-28P-201ENST00000516759 62 ntBASIC3.37□□□□□ -1.87
RFX1P22670 AC131055.1-201ENST00000584626 316 ntBASIC3.37□□□□□ -1.87
RFX1P22670 CTSLP2-204ENST00000629029 392 ntBASIC3.37□□□□□ -1.87
RFX1P22670 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.37□□□□□ -1.87
RFX1P22670 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RFX1P22670 RNU6-1019P-201ENST00000364424 107 ntBASIC3.36□□□□□ -1.87
RFX1P22670 MIR522-201ENST00000385071 87 ntBASIC3.36□□□□□ -1.87
RFX1P22670 Y_RNA.629-201ENST00000411368 105 ntBASIC3.36□□□□□ -1.87
RFX1P22670 TRBV12-1-201ENST00000479785 344 ntBASIC3.36□□□□□ -1.87
RFX1P22670 MIR4435-1-201ENST00000582552 80 ntBASIC3.36□□□□□ -1.87
RFX1P22670 AC022217.4-201ENST00000604389 163 ntBASIC3.36□□□□□ -1.87
RFX1P22670 AL035425.3-201ENST00000564206 4996 ntBASIC3.36□□□□□ -1.87
RFX1P22670 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
RFX1P22670 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RFX1P22670 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RFX1P22670 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
RFX1P22670 Y_RNA.120-201ENST00000363304 110 ntBASIC3.35□□□□□ -1.87
RFX1P22670 U8.5-201ENST00000364528 136 ntBASIC3.35□□□□□ -1.87
RFX1P22670 RNU1-91P-201ENST00000364746 163 ntBASIC3.35□□□□□ -1.87
RFX1P22670 SNORD72-201ENST00000390994 80 ntBASIC3.35□□□□□ -1.87
RFX1P22670 RNA5SP274-201ENST00000410484 108 ntBASIC3.35□□□□□ -1.87
RFX1P22670 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.35□□□□□ -1.87
RFX1P22670 MLLT10P1-201ENST00000418346 262 ntBASIC3.35□□□□□ -1.87
RFX1P22670 SNORA31.26-201ENST00000517250 137 ntBASIC3.35□□□□□ -1.87
RFX1P22670 AC007751.1-201ENST00000529260 376 ntBASIC3.35□□□□□ -1.87
RFX1P22670 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.35□□□□□ -1.87
RFX1P22670 AL365205.2-201ENST00000594586 68 ntBASIC3.35□□□□□ -1.87
RFX1P22670 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.35□□□□□ -1.87
RFX1P22670 AC245060.5-201ENST00000610778 3293 ntBASIC3.35□□□□□ -1.87
RFX1P22670 SNORD24-201ENST00000383884 75 ntBASIC3.34□□□□□ -1.87
RFX1P22670 SNORD15B-201ENST00000384714 146 ntBASIC3.34□□□□□ -1.87
RFX1P22670 RNA5SP482-201ENST00000391269 118 ntBASIC3.34□□□□□ -1.87
RFX1P22670 AC069257.2-201ENST00000441819 155 ntBASIC3.34□□□□□ -1.87
RFX1P22670 SCGB1D5P-201ENST00000515134 247 ntBASIC3.34□□□□□ -1.87
RFX1P22670 RN7SKP43-201ENST00000516173 320 ntBASIC3.34□□□□□ -1.87
RFX1P22670 MIR4672-201ENST00000583126 81 ntBASIC3.34□□□□□ -1.87
RFX1P22670 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.34□□□□□ -1.87
RFX1P22670 AL359881.1-201ENST00000602916 267 ntBASIC3.34□□□□□ -1.87
RFX1P22670 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RFX1P22670 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RFX1P22670 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
RFX1P22670 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RFX1P22670 U8.1-201ENST00000362843 134 ntBASIC3.33□□□□□ -1.88
RFX1P22670 Y_RNA.81-201ENST00000362997 102 ntBASIC3.33□□□□□ -1.88
RFX1P22670 RNA5SP465-201ENST00000391195 109 ntBASIC3.33□□□□□ -1.88
RFX1P22670 BX510359.4-201ENST00000423750 193 ntBASIC3.33□□□□□ -1.88
RFX1P22670 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.33□□□□□ -1.88
RFX1P22670 RN7SL75P-201ENST00000461926 281 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms