Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 SNORA40.14-201ENST00000516543 86 ntBASIC1.31□□□□□ -2.2
ERCC2P18074 AC022441.3-201ENST00000605737 136 ntBASIC1.31□□□□□ -2.2
ERCC2P18074 snoU13.31-201ENST00000607291 104 ntBASIC1.31□□□□□ -2.2
ERCC2P18074 AC010205.1-201ENST00000616668 449 ntBASIC1.31□□□□□ -2.2
ERCC2P18074 Y_RNA.172-201ENST00000363765 102 ntBASIC1.3□□□□□ -2.2
ERCC2P18074 RNU5E-4P-201ENST00000364931 120 ntBASIC1.3□□□□□ -2.2
ERCC2P18074 RNU6-867P-201ENST00000364956 107 ntBASIC1.3□□□□□ -2.2
ERCC2P18074 RNU6-1175P-201ENST00000365200 107 ntBASIC1.3□□□□□ -2.2
ERCC2P18074 RNU6-1080P-201ENST00000383982 107 ntBASIC1.3□□□□□ -2.2
ERCC2P18074 Y_RNA.458-201ENST00000384240 102 ntBASIC1.3□□□□□ -2.2
ERCC2P18074 MIR150-201ENST00000385048 84 ntBASIC1.3□□□□□ -2.2
ERCC2P18074 MIR653-201ENST00000385279 96 ntBASIC1.3□□□□□ -2.2
ERCC2P18074 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.3□□□□□ -2.2
ERCC2P18074 RNU2-61P-201ENST00000411069 191 ntBASIC1.3□□□□□ -2.2
ERCC2P18074 RPL23AP36-201ENST00000413895 458 ntBASIC1.3□□□□□ -2.2
ERCC2P18074 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.3□□□□□ -2.2
ERCC2P18074 RNU6-436P-201ENST00000516171 114 ntBASIC1.3□□□□□ -2.2
ERCC2P18074 RNU6-917P-201ENST00000516294 104 ntBASIC1.3□□□□□ -2.2
ERCC2P18074 RN7SKP295-201ENST00000517264 153 ntBASIC1.3□□□□□ -2.2
ERCC2P18074 MIR4498-201ENST00000577599 66 ntBASIC1.3□□□□□ -2.2
ERCC2P18074 AC007485.1-201ENST00000616755 206 ntBASIC1.3□□□□□ -2.2
ERCC2P18074 uc_338.22-201ENST00000622722 187 ntBASIC1.3□□□□□ -2.2
ERCC2P18074 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
ERCC2P18074 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
ERCC2P18074 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.29□□□□□ -2.2
ERCC2P18074 MIR369-201ENST00000362155 70 ntBASIC1.29□□□□□ -2.2
ERCC2P18074 Y_RNA.112-201ENST00000363250 102 ntBASIC1.29□□□□□ -2.2
ERCC2P18074 Y_RNA.431-201ENST00000384086 102 ntBASIC1.29□□□□□ -2.2
ERCC2P18074 Y_RNA.570-201ENST00000384750 101 ntBASIC1.29□□□□□ -2.2
ERCC2P18074 Y_RNA.621-201ENST00000411065 96 ntBASIC1.29□□□□□ -2.2
ERCC2P18074 RNU6-1116P-201ENST00000517269 99 ntBASIC1.29□□□□□ -2.2
ERCC2P18074 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.29□□□□□ -2.2
ERCC2P18074 AC090049.2-201ENST00000550377 109 ntBASIC1.29□□□□□ -2.2
ERCC2P18074 AL121655.1-201ENST00000605811 308 ntBASIC1.29□□□□□ -2.2
ERCC2P18074 Y_RNA.772-201ENST00000606692 102 ntBASIC1.29□□□□□ -2.2
ERCC2P18074 AL050343.2-201ENST00000607338 280 ntBASIC1.29□□□□□ -2.2
ERCC2P18074 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
ERCC2P18074 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.29□□□□□ -2.2
ERCC2P18074 Y_RNA.395-201ENST00000383945 109 ntBASIC1.28□□□□□ -2.2
ERCC2P18074 RNU6-308P-201ENST00000390957 107 ntBASIC1.28□□□□□ -2.2
ERCC2P18074 AL133373.1-201ENST00000497098 94 ntBASIC1.28□□□□□ -2.2
ERCC2P18074 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.28□□□□□ -2.2
ERCC2P18074 MIR4423-201ENST00000580922 80 ntBASIC1.28□□□□□ -2.2
ERCC2P18074 C8orf59P2-201ENST00000603441 271 ntBASIC1.28□□□□□ -2.2
ERCC2P18074 GHRLOS.1-201ENST00000610995 70 ntBASIC1.28□□□□□ -2.2
ERCC2P18074 AC091812.1-201ENST00000432235 1948 ntBASIC1.28□□□□□ -2.2
ERCC2P18074 SNORD68-201ENST00000363214 84 ntBASIC1.27□□□□□ -2.21
ERCC2P18074 Y_RNA.813-201ENST00000364639 102 ntBASIC1.27□□□□□ -2.21
ERCC2P18074 Y_RNA.329-201ENST00000365209 107 ntBASIC1.27□□□□□ -2.21
ERCC2P18074 SNORA2.2-201ENST00000365473 135 ntBASIC1.27□□□□□ -2.21
ERCC2P18074 SNORD42.2-201ENST00000365570 69 ntBASIC1.27□□□□□ -2.21
ERCC2P18074 SNORD41-201ENST00000386967 70 ntBASIC1.27□□□□□ -2.21
ERCC2P18074 AC005042.3-201ENST00000453230 174 ntBASIC1.27□□□□□ -2.21
ERCC2P18074 AC011604.1-201ENST00000545978 196 ntBASIC1.27□□□□□ -2.21
ERCC2P18074 AC008269.2-201ENST00000561915 1105 ntBASIC1.27□□□□□ -2.21
ERCC2P18074 AC004832.4-201ENST00000608952 331 ntBASIC1.27□□□□□ -2.21
ERCC2P18074 AL353770.2-201ENST00000620024 78 ntBASIC1.27□□□□□ -2.21
ERCC2P18074 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.27□□□□□ -2.21
ERCC2P18074 SNORA25.8-201ENST00000364831 128 ntBASIC1.26□□□□□ -2.21
ERCC2P18074 Y_RNA.331-201ENST00000365267 102 ntBASIC1.26□□□□□ -2.21
ERCC2P18074 AL451046.2-201ENST00000403074 277 ntBASIC1.26□□□□□ -2.21
ERCC2P18074 AC104332.1-201ENST00000440471 797 ntBASIC1.26□□□□□ -2.21
ERCC2P18074 AC092473.1-201ENST00000441098 221 ntBASIC1.26□□□□□ -2.21
ERCC2P18074 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.26□□□□□ -2.21
ERCC2P18074 Y_RNA.639-201ENST00000458981 102 ntBASIC1.26□□□□□ -2.21
ERCC2P18074 RNU6-322P-201ENST00000516010 103 ntBASIC1.26□□□□□ -2.21
ERCC2P18074 AC090821.2-201ENST00000523552 176 ntBASIC1.26□□□□□ -2.21
ERCC2P18074 AC040926.1-201ENST00000530195 238 ntBASIC1.26□□□□□ -2.21
ERCC2P18074 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.26□□□□□ -2.21
ERCC2P18074 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.26□□□□□ -2.21
ERCC2P18074 AC090971.5-201ENST00000621102 293 ntBASIC1.26□□□□□ -2.21
ERCC2P18074 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
ERCC2P18074 AL391987.6-201ENST00000305671 199 ntBASIC1.25□□□□□ -2.21
ERCC2P18074 Y_RNA.31-201ENST00000362574 102 ntBASIC1.25□□□□□ -2.21
ERCC2P18074 SNORD14.1-201ENST00000365609 90 ntBASIC1.25□□□□□ -2.21
ERCC2P18074 Y_RNA.439-201ENST00000384119 94 ntBASIC1.25□□□□□ -2.21
ERCC2P18074 Y_RNA.462-201ENST00000384268 102 ntBASIC1.25□□□□□ -2.21
ERCC2P18074 Y_RNA.471-201ENST00000384312 102 ntBASIC1.25□□□□□ -2.21
ERCC2P18074 Y_RNA.526-201ENST00000384572 110 ntBASIC1.25□□□□□ -2.21
ERCC2P18074 MIR1302-11-201ENST00000408051 138 ntBASIC1.25□□□□□ -2.21
ERCC2P18074 MIR1302-9-201ENST00000408365 138 ntBASIC1.25□□□□□ -2.21
ERCC2P18074 MIR1302-10-201ENST00000408734 138 ntBASIC1.25□□□□□ -2.21
ERCC2P18074 MCFD2P1-201ENST00000417812 300 ntBASIC1.25□□□□□ -2.21
ERCC2P18074 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.25□□□□□ -2.21
ERCC2P18074 MTND4P19-201ENST00000446659 478 ntBASIC1.25□□□□□ -2.21
ERCC2P18074 U8.20-201ENST00000459445 131 ntBASIC1.25□□□□□ -2.21
ERCC2P18074 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.25□□□□□ -2.21
ERCC2P18074 AC093852.1-201ENST00000503587 266 ntBASIC1.25□□□□□ -2.21
ERCC2P18074 RNU6-1053P-201ENST00000515930 101 ntBASIC1.25□□□□□ -2.21
ERCC2P18074 RNU6-475P-201ENST00000516073 104 ntBASIC1.25□□□□□ -2.21
ERCC2P18074 RNU7-110P-201ENST00000516891 62 ntBASIC1.25□□□□□ -2.21
ERCC2P18074 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
ERCC2P18074 AC120024.3-201ENST00000603167 156 ntBASIC1.25□□□□□ -2.21
ERCC2P18074 MIR1302-2-201ENST00000607096 138 ntBASIC1.25□□□□□ -2.21
ERCC2P18074 AC011373.1-201ENST00000607270 237 ntBASIC1.25□□□□□ -2.21
ERCC2P18074 AL157834.3-201ENST00000615543 103 ntBASIC1.25□□□□□ -2.21
ERCC2P18074 AL591926.4-201ENST00000616895 298 ntBASIC1.25□□□□□ -2.21
ERCC2P18074 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
ERCC2P18074 Y_RNA.143-201ENST00000363520 106 ntBASIC1.24□□□□□ -2.21
ERCC2P18074 Y_RNA.445-201ENST00000384168 102 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms