| CD99 | P14209 | AC044792.1-201 | ENST00000593294 | 196 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| CD99 | P14209 | AC006157.1-201 | ENST00000611750 | 366 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| CD99 | P14209 | AC012676.2-201 | ENST00000619258 | 186 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| CD99 | P14209 | U6.108-201 | ENST00000637764 | 58 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| CD99 | P14209 | C9orf84-204 | ENST00000394777 | 4955 nt | APPRIS ALT2 TSL 1 (best) BASIC | 0.8 | □□□□□ -2.28 | | |
| CD99 | P14209 | BX322639.1-202 | ENST00000423987 | 2213 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| CD99 | P14209 | SNORD81.1-201 | ENST00000363064 | 77 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | Y_RNA.146-201 | ENST00000363549 | 102 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | Y_RNA.252-201 | ENST00000364556 | 101 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | Y_RNA.287-201 | ENST00000364853 | 94 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | SNORA4.2-201 | ENST00000365313 | 147 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | Y_RNA.364-201 | ENST00000365532 | 101 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | Y_RNA.384-201 | ENST00000383909 | 102 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | MIR215-201 | ENST00000384858 | 110 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | AL078595.1-201 | ENST00000404458 | 226 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | AL355796.1-201 | ENST00000406706 | 323 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | MTCO2P12-201 | ENST00000427426 | 682 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | CEP57L1P1-201 | ENST00000430943 | 1201 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | LINC02238-202 | ENST00000436262 | 320 nt | TSL 3 BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | U8.20-201 | ENST00000459445 | 131 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | RPL39P28-201 | ENST00000465655 | 155 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | RNU6-397P-201 | ENST00000516226 | 104 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | RNU6-856P-201 | ENST00000516959 | 98 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | RNU7-128P-201 | ENST00000517247 | 62 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | AC027419.1-201 | ENST00000522976 | 328 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | AL442163.3-201 | ENST00000554110 | 156 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | AC133485.1-201 | ENST00000567176 | 124 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | AC138907.6-201 | ENST00000568401 | 126 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | AC006600.1-201 | ENST00000572529 | 153 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | MIR4698-201 | ENST00000577795 | 80 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | MIR4680-201 | ENST00000580906 | 66 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | MIR5690-201 | ENST00000583739 | 73 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | RAC1P9-201 | ENST00000604990 | 392 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | AL355512.1-202 | ENST00000607952 | 209 nt | TSL 5 BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | AC068647.2-201 | ENST00000637380 | 353 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | CCDC14-221 | ENST00000489746 | 6476 nt | APPRIS ALT2 TSL 1 (best) BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | AC073544.1-201 | ENST00000600110 | 1595 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CD99 | P14209 | RNU6-490P-201 | ENST00000362985 | 107 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | Y_RNA.222-201 | ENST00000364264 | 102 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | RNU6-879P-201 | ENST00000364328 | 108 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | RNU6-1305P-201 | ENST00000364353 | 104 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | Y_RNA.326-201 | ENST00000365176 | 113 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | Y_RNA.445-201 | ENST00000384168 | 102 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | RNU6-35P-201 | ENST00000384530 | 107 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | RNU6-1235P-201 | ENST00000384559 | 107 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | Y_RNA.577-201 | ENST00000384794 | 101 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | MIR153-2-201 | ENST00000385225 | 87 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | MT-TD-201 | ENST00000387419 | 68 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | RNA5SP467-201 | ENST00000391274 | 118 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | MIR548P-201 | ENST00000408336 | 84 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | MIR1283-1-201 | ENST00000408494 | 87 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | SNORD12B-201 | ENST00000410433 | 91 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | NCKAP5-IT1-201 | ENST00000416437 | 554 nt | TSL 4 BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | COX6CP10-201 | ENST00000416832 | 224 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | RPL21P38-201 | ENST00000418090 | 167 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | ELOCP20-201 | ENST00000422460 | 345 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | USP9YP16-201 | ENST00000430287 | 407 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | RPEP5-201 | ENST00000441137 | 268 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | UBE2V1P7-201 | ENST00000446395 | 340 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | AC009237.7-201 | ENST00000447357 | 229 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | USP9YP23-201 | ENST00000455085 | 407 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | RNU6-498P-201 | ENST00000459468 | 107 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | RPS26P45-201 | ENST00000471748 | 340 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | RNU7-175P-201 | ENST00000515915 | 61 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | RNU6-1114P-201 | ENST00000516022 | 107 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | RNU4ATAC7P-201 | ENST00000516280 | 125 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | SCARNA15.1-201 | ENST00000516384 | 125 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | RNU6-1012P-201 | ENST00000516606 | 109 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | RNU6-567P-201 | ENST00000516746 | 107 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | CYCSP23-201 | ENST00000519781 | 313 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | AC084882.1-201 | ENST00000561254 | 555 nt | TSL 4 BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | AC090617.3-201 | ENST00000573670 | 475 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | AL356157.2-201 | ENST00000605122 | 111 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | DLX6-AS1_2.1-201 | ENST00000613701 | 207 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | U2.1-201 | ENST00000618978 | 145 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | AC006001.4-201 | ENST00000622243 | 395 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | AC090574.1-201 | ENST00000623186 | 233 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | hsa-mir-548d-1.1-201 | ENST00000636914 | 97 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CD99 | P14209 | RNU6-137P-201 | ENST00000363680 | 108 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CD99 | P14209 | SNORA63C-201 | ENST00000364578 | 129 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CD99 | P14209 | RNU6-937P-201 | ENST00000384325 | 106 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CD99 | P14209 | RNU6-1026P-201 | ENST00000384465 | 108 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CD99 | P14209 | RNU6-1106P-201 | ENST00000390845 | 107 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CD99 | P14209 | RNU6-823P-201 | ENST00000391042 | 103 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CD99 | P14209 | RNU4-30P-201 | ENST00000410245 | 143 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CD99 | P14209 | RNU6-57P-201 | ENST00000411348 | 103 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CD99 | P14209 | AL590399.1-203 | ENST00000412631 | 256 nt | TSL 5 BASIC | 0.77 | □□□□□ -2.29 | | |
| CD99 | P14209 | MTCO2P27-201 | ENST00000420740 | 428 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CD99 | P14209 | HSPE1P13-201 | ENST00000451143 | 297 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CD99 | P14209 | SNORA40.9-201 | ENST00000515895 | 93 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CD99 | P14209 | RNU6-408P-201 | ENST00000515910 | 100 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CD99 | P14209 | RNU6-63P-201 | ENST00000516690 | 95 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CD99 | P14209 | Y_RNA.706-201 | ENST00000516933 | 99 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CD99 | P14209 | AC023442.1-201 | ENST00000531247 | 422 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CD99 | P14209 | AC016256.1-201 | ENST00000547971 | 354 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CD99 | P14209 | SNHG14-219 | ENST00000553134 | 470 nt | TSL 2 BASIC | 0.77 | □□□□□ -2.29 | | |
| CD99 | P14209 | AC138625.2-201 | ENST00000563968 | 551 nt | TSL 3 BASIC | 0.77 | □□□□□ -2.29 | | |
| CD99 | P14209 | MIR4709-201 | ENST00000577272 | 72 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CD99 | P14209 | hsa-mir-3130-1.1-201 | ENST00000579223 | 75 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CD99 | P14209 | MIR3145-201 | ENST00000580727 | 82 nt | BASIC | 0.77 | □□□□□ -2.29 | | |