Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 RNA5SP217-201ENST00000515959 91 ntBASIC3.29□□□□□ -1.88
HOXD8P13378 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXD8P13378 U2.20-201ENST00000613956 192 ntBASIC3.29□□□□□ -1.88
HOXD8P13378 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXD8P13378 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXD8P13378 MIR126-201ENST00000362291 85 ntBASIC3.28□□□□□ -1.88
HOXD8P13378 snoU2-30.2-201ENST00000362805 70 ntBASIC3.28□□□□□ -1.88
HOXD8P13378 MIRLET7F2-201ENST00000385277 83 ntBASIC3.28□□□□□ -1.88
HOXD8P13378 RNA5SP323-201ENST00000391094 133 ntBASIC3.28□□□□□ -1.88
HOXD8P13378 RNA5SP293-201ENST00000410527 113 ntBASIC3.28□□□□□ -1.88
HOXD8P13378 AC060773.1-201ENST00000421698 310 ntBASIC3.28□□□□□ -1.88
HOXD8P13378 MICF-203ENST00000432679 129 ntBASIC3.28□□□□□ -1.88
HOXD8P13378 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXD8P13378 AC011406.1-201ENST00000512440 370 ntBASIC3.28□□□□□ -1.88
HOXD8P13378 RNU6-693P-201ENST00000516134 107 ntBASIC3.28□□□□□ -1.88
HOXD8P13378 RNU6-1149P-201ENST00000516810 97 ntBASIC3.28□□□□□ -1.88
HOXD8P13378 AL359075.3-201ENST00000613288 217 ntBASIC3.28□□□□□ -1.88
HOXD8P13378 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.28□□□□□ -1.88
HOXD8P13378 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
HOXD8P13378 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HOXD8P13378 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXD8P13378 Y_RNA.332-201ENST00000365271 113 ntBASIC3.27□□□□□ -1.89
HOXD8P13378 SNORA9.2-201ENST00000365361 133 ntBASIC3.27□□□□□ -1.89
HOXD8P13378 RNU6-1292P-201ENST00000383856 107 ntBASIC3.27□□□□□ -1.89
HOXD8P13378 SNORD61-201ENST00000384252 73 ntBASIC3.27□□□□□ -1.89
HOXD8P13378 SNORD72-201ENST00000390994 80 ntBASIC3.27□□□□□ -1.89
HOXD8P13378 AC022018.1-201ENST00000430685 241 ntBASIC3.27□□□□□ -1.89
HOXD8P13378 Y_RNA.666-201ENST00000516187 112 ntBASIC3.27□□□□□ -1.89
HOXD8P13378 RNU7-99P-201ENST00000516271 62 ntBASIC3.27□□□□□ -1.89
HOXD8P13378 AL355297.2-201ENST00000604792 129 ntBASIC3.27□□□□□ -1.89
HOXD8P13378 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXD8P13378 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXD8P13378 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXD8P13378 AC062016.1-201ENST00000355719 319 ntBASIC3.26□□□□□ -1.89
HOXD8P13378 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HOXD8P13378 EDDM3CP-201ENST00000415977 425 ntBASIC3.26□□□□□ -1.89
HOXD8P13378 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXD8P13378 SNRPGP13-201ENST00000442212 177 ntBASIC3.26□□□□□ -1.89
HOXD8P13378 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXD8P13378 RNU6-1041P-201ENST00000516254 102 ntBASIC3.26□□□□□ -1.89
HOXD8P13378 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXD8P13378 AC106754.2-201ENST00000623006 233 ntBASIC3.26□□□□□ -1.89
HOXD8P13378 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
HOXD8P13378 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HOXD8P13378 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HOXD8P13378 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HOXD8P13378 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HOXD8P13378 RNU6-805P-201ENST00000365643 106 ntBASIC3.25□□□□□ -1.89
HOXD8P13378 SNORD24-201ENST00000383884 75 ntBASIC3.25□□□□□ -1.89
HOXD8P13378 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXD8P13378 AC108938.1-201ENST00000451204 136 ntBASIC3.25□□□□□ -1.89
HOXD8P13378 SCGB1D5P-201ENST00000515134 247 ntBASIC3.25□□□□□ -1.89
HOXD8P13378 RNU1-142P-201ENST00000516682 145 ntBASIC3.25□□□□□ -1.89
HOXD8P13378 AC068657.1-201ENST00000520807 306 ntBASIC3.25□□□□□ -1.89
HOXD8P13378 IGKV1-22-201ENST00000524313 326 ntBASIC3.25□□□□□ -1.89
HOXD8P13378 AC007012.1-201ENST00000567192 175 ntBASIC3.25□□□□□ -1.89
HOXD8P13378 MIR4319-201ENST00000577285 85 ntBASIC3.25□□□□□ -1.89
HOXD8P13378 AC008507.4-201ENST00000585464 127 ntBASIC3.25□□□□□ -1.89
HOXD8P13378 AL137067.1-201ENST00000615933 120 ntBASIC3.25□□□□□ -1.89
HOXD8P13378 MIR6079-201ENST00000635807 62 ntBASIC3.25□□□□□ -1.89
HOXD8P13378 AC018630.2-201ENST00000534866 2403 ntBASIC3.25□□□□□ -1.89
HOXD8P13378 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HOXD8P13378 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXD8P13378 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXD8P13378 AC092435.3-201ENST00000565538 3654 ntBASIC3.24□□□□□ -1.89
HOXD8P13378 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.24□□□□□ -1.89
HOXD8P13378 RNU6-888P-201ENST00000363010 101 ntBASIC3.24□□□□□ -1.89
HOXD8P13378 SNORD12C-201ENST00000386307 89 ntBASIC3.24□□□□□ -1.89
HOXD8P13378 RNA5SP136-201ENST00000410906 107 ntBASIC3.24□□□□□ -1.89
HOXD8P13378 RPL32P35-201ENST00000415214 394 ntBASIC3.24□□□□□ -1.89
HOXD8P13378 TRIAP1P1-201ENST00000427062 225 ntBASIC3.24□□□□□ -1.89
HOXD8P13378 RPS27P29-201ENST00000463110 252 ntBASIC3.24□□□□□ -1.89
HOXD8P13378 RNU6-113P-201ENST00000516653 101 ntBASIC3.24□□□□□ -1.89
HOXD8P13378 SNORA48.11-201ENST00000517015 89 ntBASIC3.24□□□□□ -1.89
HOXD8P13378 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXD8P13378 AC079600.2-201ENST00000550076 130 ntBASIC3.24□□□□□ -1.89
HOXD8P13378 MAPK10-362ENST00000641864 4484 ntBASIC3.24□□□□□ -1.89
HOXD8P13378 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXD8P13378 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXD8P13378 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXD8P13378 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXD8P13378 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXD8P13378 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HOXD8P13378 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HOXD8P13378 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
HOXD8P13378 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
HOXD8P13378 SNORD56.3-201ENST00000363507 71 ntBASIC3.23□□□□□ -1.89
HOXD8P13378 RNU1-96P-201ENST00000364163 162 ntBASIC3.23□□□□□ -1.89
HOXD8P13378 RNU6-1107P-201ENST00000364817 104 ntBASIC3.23□□□□□ -1.89
HOXD8P13378 MIR570-201ENST00000384917 97 ntBASIC3.23□□□□□ -1.89
HOXD8P13378 RNA5SP467-201ENST00000391274 118 ntBASIC3.23□□□□□ -1.89
HOXD8P13378 AL590004.2-201ENST00000404787 371 ntBASIC3.23□□□□□ -1.89
HOXD8P13378 RNA5SP184-201ENST00000411071 108 ntBASIC3.23□□□□□ -1.89
HOXD8P13378 CALM2P4-201ENST00000430810 426 ntBASIC3.23□□□□□ -1.89
HOXD8P13378 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.23□□□□□ -1.89
HOXD8P13378 RNA5SP236-201ENST00000516169 116 ntBASIC3.23□□□□□ -1.89
HOXD8P13378 RNU7-70P-201ENST00000516941 66 ntBASIC3.23□□□□□ -1.89
HOXD8P13378 AC087685.1-201ENST00000587507 141 ntBASIC3.23□□□□□ -1.89
HOXD8P13378 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HOXD8P13378 ZNF271P-202ENST00000465539 1970 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms