Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 AC005042.3-201ENST00000453230 174 ntBASIC1.66□□□□□ -2.14
ACTN1P12814 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.66□□□□□ -2.14
ACTN1P12814 MIR3145-201ENST00000580727 82 ntBASIC1.66□□□□□ -2.14
ACTN1P12814 MIR4423-201ENST00000580922 80 ntBASIC1.66□□□□□ -2.14
ACTN1P12814 DEFB117-201ENST00000602356 141 ntBASIC1.66□□□□□ -2.14
ACTN1P12814 AL078603.1-201ENST00000603824 313 ntBASIC1.66□□□□□ -2.14
ACTN1P12814 RAC1P9-201ENST00000604990 392 ntBASIC1.66□□□□□ -2.14
ACTN1P12814 Y_RNA.172-201ENST00000363765 102 ntBASIC1.65□□□□□ -2.15
ACTN1P12814 RNU6-117P-201ENST00000365415 107 ntBASIC1.65□□□□□ -2.15
ACTN1P12814 SNORD116-13-201ENST00000384408 92 ntBASIC1.65□□□□□ -2.15
ACTN1P12814 MIR320A-201ENST00000385302 82 ntBASIC1.65□□□□□ -2.15
ACTN1P12814 RNA5SP511-201ENST00000410487 115 ntBASIC1.65□□□□□ -2.15
ACTN1P12814 RNU5A-5P-201ENST00000411054 116 ntBASIC1.65□□□□□ -2.15
ACTN1P12814 STAG3L5P-204ENST00000443759 179 ntBASIC1.65□□□□□ -2.15
ACTN1P12814 snoU13.9-201ENST00000458927 103 ntBASIC1.65□□□□□ -2.15
ACTN1P12814 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.65□□□□□ -2.15
ACTN1P12814 SNORA70.12-201ENST00000516084 153 ntBASIC1.65□□□□□ -2.15
ACTN1P12814 RNA5SP220-201ENST00000516298 104 ntBASIC1.65□□□□□ -2.15
ACTN1P12814 RNA5SP102-201ENST00000516865 106 ntBASIC1.65□□□□□ -2.15
ACTN1P12814 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
ACTN1P12814 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.65□□□□□ -2.15
ACTN1P12814 AC136932.1-201ENST00000574771 208 ntBASIC1.65□□□□□ -2.15
ACTN1P12814 AC044792.1-201ENST00000593294 196 ntBASIC1.65□□□□□ -2.15
ACTN1P12814 AC091895.1-201ENST00000624494 256 ntBASIC1.65□□□□□ -2.15
ACTN1P12814 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.65□□□□□ -2.15
ACTN1P12814 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
ACTN1P12814 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.65□□□□□ -2.15
ACTN1P12814 Y_RNA.551-201ENST00000384661 102 ntBASIC1.64□□□□□ -2.15
ACTN1P12814 MIR1304-201ENST00000408243 91 ntBASIC1.64□□□□□ -2.15
ACTN1P12814 Y_RNA.602-201ENST00000410535 92 ntBASIC1.64□□□□□ -2.15
ACTN1P12814 HSPE1P24-201ENST00000450782 238 ntBASIC1.64□□□□□ -2.15
ACTN1P12814 RNU1-98P-201ENST00000458992 160 ntBASIC1.64□□□□□ -2.15
ACTN1P12814 RNU7-94P-201ENST00000459576 63 ntBASIC1.64□□□□□ -2.15
ACTN1P12814 AC010655.3-201ENST00000478818 450 ntBASIC1.64□□□□□ -2.15
ACTN1P12814 RNU2-56P-201ENST00000516826 190 ntBASIC1.64□□□□□ -2.15
ACTN1P12814 AC022616.4-201ENST00000522985 181 ntBASIC1.64□□□□□ -2.15
ACTN1P12814 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.64□□□□□ -2.15
ACTN1P12814 MIR6078-201ENST00000611069 100 ntBASIC1.64□□□□□ -2.15
ACTN1P12814 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.64□□□□□ -2.15
ACTN1P12814 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
ACTN1P12814 SNORD81.1-201ENST00000363064 77 ntBASIC1.63□□□□□ -2.15
ACTN1P12814 Y_RNA.202-201ENST00000364083 110 ntBASIC1.63□□□□□ -2.15
ACTN1P12814 Y_RNA.286-201ENST00000364813 102 ntBASIC1.63□□□□□ -2.15
ACTN1P12814 Y_RNA.462-201ENST00000384268 102 ntBASIC1.63□□□□□ -2.15
ACTN1P12814 RN7SKP200-201ENST00000410564 320 ntBASIC1.63□□□□□ -2.15
ACTN1P12814 Y_RNA.621-201ENST00000411065 96 ntBASIC1.63□□□□□ -2.15
ACTN1P12814 RNU2-61P-201ENST00000411069 191 ntBASIC1.63□□□□□ -2.15
ACTN1P12814 AC005534.2-201ENST00000431047 433 ntBASIC1.63□□□□□ -2.15
ACTN1P12814 FTH1P12-201ENST00000432137 551 ntBASIC1.63□□□□□ -2.15
ACTN1P12814 AC099513.1-201ENST00000490423 301 ntBASIC1.63□□□□□ -2.15
ACTN1P12814 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.63□□□□□ -2.15
ACTN1P12814 Y_RNA.713-201ENST00000517013 96 ntBASIC1.63□□□□□ -2.15
ACTN1P12814 RNU6-1137P-201ENST00000517073 99 ntBASIC1.63□□□□□ -2.15
ACTN1P12814 RNU6-1096P-201ENST00000517089 102 ntBASIC1.63□□□□□ -2.15
ACTN1P12814 RNU6-897P-201ENST00000517135 105 ntBASIC1.63□□□□□ -2.15
ACTN1P12814 SNORA77B-201ENST00000578179 125 ntBASIC1.63□□□□□ -2.15
ACTN1P12814 MIR4680-201ENST00000580906 66 ntBASIC1.63□□□□□ -2.15
ACTN1P12814 AC021506.2-201ENST00000612354 169 ntBASIC1.63□□□□□ -2.15
ACTN1P12814 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.63□□□□□ -2.15
ACTN1P12814 MIR376A1-201ENST00000616574 68 ntBASIC1.63□□□□□ -2.15
ACTN1P12814 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.63□□□□□ -2.15
ACTN1P12814 ICE2P2-201ENST00000483823 2787 ntBASIC1.63□□□□□ -2.15
ACTN1P12814 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
ACTN1P12814 RNU4-13P-201ENST00000364019 141 ntBASIC1.62□□□□□ -2.15
ACTN1P12814 Y_RNA.265-201ENST00000364677 108 ntBASIC1.62□□□□□ -2.15
ACTN1P12814 Y_RNA.361-201ENST00000365515 120 ntBASIC1.62□□□□□ -2.15
ACTN1P12814 RNU6-950P-201ENST00000384651 107 ntBASIC1.62□□□□□ -2.15
ACTN1P12814 RNU6-1031P-201ENST00000384773 107 ntBASIC1.62□□□□□ -2.15
ACTN1P12814 MIR1252-201ENST00000408861 65 ntBASIC1.62□□□□□ -2.15
ACTN1P12814 RNU6-855P-201ENST00000410395 104 ntBASIC1.62□□□□□ -2.15
ACTN1P12814 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.62□□□□□ -2.15
ACTN1P12814 AL354695.1-201ENST00000427935 228 ntBASIC1.62□□□□□ -2.15
ACTN1P12814 MTCYBP6-201ENST00000441810 138 ntBASIC1.62□□□□□ -2.15
ACTN1P12814 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.62□□□□□ -2.15
ACTN1P12814 AC023790.1-201ENST00000482174 347 ntBASIC1.62□□□□□ -2.15
ACTN1P12814 Y_RNA.721-201ENST00000517207 102 ntBASIC1.62□□□□□ -2.15
ACTN1P12814 MIR6734-201ENST00000621166 68 ntBASIC1.62□□□□□ -2.15
ACTN1P12814 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.62□□□□□ -2.15
ACTN1P12814 AP000648.3-201ENST00000623539 4507 ntBASIC1.61□□□□□ -2.15
ACTN1P12814 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
ACTN1P12814 SNORA1B-201ENST00000362535 133 ntBASIC1.61□□□□□ -2.15
ACTN1P12814 Y_RNA.158-201ENST00000363651 101 ntBASIC1.61□□□□□ -2.15
ACTN1P12814 RNU6-338P-201ENST00000383888 105 ntBASIC1.61□□□□□ -2.15
ACTN1P12814 Y_RNA.455-201ENST00000384230 98 ntBASIC1.61□□□□□ -2.15
ACTN1P12814 SNORA12.1-201ENST00000390873 148 ntBASIC1.61□□□□□ -2.15
ACTN1P12814 AL390729.2-201ENST00000416137 156 ntBASIC1.61□□□□□ -2.15
ACTN1P12814 AC019176.1-201ENST00000518519 225 ntBASIC1.61□□□□□ -2.15
ACTN1P12814 AC131281.1-201ENST00000522984 164 ntBASIC1.61□□□□□ -2.15
ACTN1P12814 AC091178.2-201ENST00000584401 117 ntBASIC1.61□□□□□ -2.15
ACTN1P12814 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
ACTN1P12814 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
ACTN1P12814 Y_RNA.105-201ENST00000363182 111 ntBASIC1.6□□□□□ -2.15
ACTN1P12814 SNORD113-8-201ENST00000363497 74 ntBASIC1.6□□□□□ -2.15
ACTN1P12814 Y_RNA.210-201ENST00000364161 110 ntBASIC1.6□□□□□ -2.15
ACTN1P12814 SNORA33.2-201ENST00000365413 134 ntBASIC1.6□□□□□ -2.15
ACTN1P12814 SNORA63.7-201ENST00000365579 123 ntBASIC1.6□□□□□ -2.15
ACTN1P12814 RNU6-1227P-201ENST00000383981 107 ntBASIC1.6□□□□□ -2.15
ACTN1P12814 SNORD63-201ENST00000384262 68 ntBASIC1.6□□□□□ -2.15
ACTN1P12814 RNU6-102P-201ENST00000384485 104 ntBASIC1.6□□□□□ -2.15
ACTN1P12814 AL590004.1-201ENST00000405321 300 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms