Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 ZNF271P-202ENST00000465539 1970 ntBASIC2.63□□□□□ -1.99
COL6A2P12110 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.63□□□□□ -1.99
COL6A2P12110 RNU6-1209P-201ENST00000363655 107 ntBASIC2.63□□□□□ -1.99
COL6A2P12110 RNA5SP493-201ENST00000364115 91 ntBASIC2.63□□□□□ -1.99
COL6A2P12110 RNU6-1164P-201ENST00000364428 107 ntBASIC2.63□□□□□ -1.99
COL6A2P12110 DEFA7P-201ENST00000382676 285 ntBASIC2.63□□□□□ -1.99
COL6A2P12110 RNU6-484P-201ENST00000384016 107 ntBASIC2.63□□□□□ -1.99
COL6A2P12110 MIR562-201ENST00000384894 95 ntBASIC2.63□□□□□ -1.99
COL6A2P12110 CST2P1-201ENST00000425770 87 ntBASIC2.63□□□□□ -1.99
COL6A2P12110 RPS27P1-201ENST00000450552 247 ntBASIC2.63□□□□□ -1.99
COL6A2P12110 AC023449.1-201ENST00000454464 154 ntBASIC2.63□□□□□ -1.99
COL6A2P12110 RPS26P45-201ENST00000471748 340 ntBASIC2.63□□□□□ -1.99
COL6A2P12110 RNU6-341P-201ENST00000516973 96 ntBASIC2.63□□□□□ -1.99
COL6A2P12110 RPL23AP91-201ENST00000569211 455 ntBASIC2.63□□□□□ -1.99
COL6A2P12110 MIR3169-201ENST00000578032 83 ntBASIC2.63□□□□□ -1.99
COL6A2P12110 MIR4635-201ENST00000583759 79 ntBASIC2.63□□□□□ -1.99
COL6A2P12110 AL033523.1-201ENST00000605153 153 ntBASIC2.63□□□□□ -1.99
COL6A2P12110 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
COL6A2P12110 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
COL6A2P12110 RNU4-11P-201ENST00000365287 132 ntBASIC2.62□□□□□ -1.99
COL6A2P12110 RNU6-597P-201ENST00000365620 102 ntBASIC2.62□□□□□ -1.99
COL6A2P12110 SNORA79-201ENST00000408376 140 ntBASIC2.62□□□□□ -1.99
COL6A2P12110 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.62□□□□□ -1.99
COL6A2P12110 Y_RNA.622-201ENST00000411091 108 ntBASIC2.62□□□□□ -1.99
COL6A2P12110 AC007064.1-201ENST00000412238 351 ntBASIC2.62□□□□□ -1.99
COL6A2P12110 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.62□□□□□ -1.99
COL6A2P12110 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.62□□□□□ -1.99
COL6A2P12110 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.62□□□□□ -1.99
COL6A2P12110 SNORD77.4-201ENST00000516158 81 ntBASIC2.62□□□□□ -1.99
COL6A2P12110 RNA5SP153-201ENST00000516498 76 ntBASIC2.62□□□□□ -1.99
COL6A2P12110 RNU6-197P-201ENST00000516680 100 ntBASIC2.62□□□□□ -1.99
COL6A2P12110 MIR378D2-201ENST00000580636 98 ntBASIC2.62□□□□□ -1.99
COL6A2P12110 MIR4658-201ENST00000584344 65 ntBASIC2.62□□□□□ -1.99
COL6A2P12110 AL049861.1-201ENST00000603130 150 ntBASIC2.62□□□□□ -1.99
COL6A2P12110 AL137847.3-201ENST00000611521 109 ntBASIC2.62□□□□□ -1.99
COL6A2P12110 MIR203B-201ENST00000636080 86 ntBASIC2.62□□□□□ -1.99
COL6A2P12110 MIR3658-201ENST00000636291 56 ntBASIC2.62□□□□□ -1.99
COL6A2P12110 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.62□□□□□ -1.99
COL6A2P12110 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
COL6A2P12110 Y_RNA.393-201ENST00000383936 102 ntBASIC2.61□□□□□ -1.99
COL6A2P12110 Y_RNA.432-201ENST00000384087 111 ntBASIC2.61□□□□□ -1.99
COL6A2P12110 MIR9-1-201ENST00000385198 89 ntBASIC2.61□□□□□ -1.99
COL6A2P12110 Y_RNA.586-201ENST00000391146 98 ntBASIC2.61□□□□□ -1.99
COL6A2P12110 RPL30P13-201ENST00000418873 348 ntBASIC2.61□□□□□ -1.99
COL6A2P12110 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.61□□□□□ -1.99
COL6A2P12110 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.61□□□□□ -1.99
COL6A2P12110 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.61□□□□□ -1.99
COL6A2P12110 RNU7-94P-201ENST00000459576 63 ntBASIC2.61□□□□□ -1.99
COL6A2P12110 RNU6-1299P-201ENST00000516316 100 ntBASIC2.61□□□□□ -1.99
COL6A2P12110 RNU6-426P-201ENST00000516464 97 ntBASIC2.61□□□□□ -1.99
COL6A2P12110 AC006023.1-201ENST00000603944 259 ntBASIC2.61□□□□□ -1.99
COL6A2P12110 MIR6079-201ENST00000635807 62 ntBASIC2.61□□□□□ -1.99
COL6A2P12110 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
COL6A2P12110 MIR6073-201ENST00000352083 89 ntBASIC2.6□□□□□ -1.99
COL6A2P12110 RNU6-1138P-201ENST00000365359 106 ntBASIC2.6□□□□□ -1.99
COL6A2P12110 RNU6-768P-201ENST00000384683 107 ntBASIC2.6□□□□□ -1.99
COL6A2P12110 MIR29C-201ENST00000385231 88 ntBASIC2.6□□□□□ -1.99
COL6A2P12110 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
COL6A2P12110 MIR513C-201ENST00000401352 84 ntBASIC2.6□□□□□ -1.99
COL6A2P12110 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.6□□□□□ -1.99
COL6A2P12110 AC087499.2-201ENST00000432861 149 ntBASIC2.6□□□□□ -1.99
COL6A2P12110 RPS12P2-201ENST00000439728 269 ntBASIC2.6□□□□□ -1.99
COL6A2P12110 YWHAEP4-201ENST00000505390 198 ntBASIC2.6□□□□□ -1.99
COL6A2P12110 RNU6-126P-201ENST00000516685 103 ntBASIC2.6□□□□□ -1.99
COL6A2P12110 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.6□□□□□ -1.99
COL6A2P12110 AC112693.2-201ENST00000556538 232 ntBASIC2.6□□□□□ -1.99
COL6A2P12110 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.6□□□□□ -1.99
COL6A2P12110 AC097639.2-201ENST00000603159 172 ntBASIC2.6□□□□□ -1.99
COL6A2P12110 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.6□□□□□ -1.99
COL6A2P12110 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
COL6A2P12110 ZNF702P-202ENST00000434269 1966 ntBASIC2.6□□□□□ -1.99
COL6A2P12110 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
COL6A2P12110 RNU6-199P-201ENST00000362954 107 ntBASIC2.59□□□□□ -1.99
COL6A2P12110 RNU1-112P-201ENST00000364401 164 ntBASIC2.59□□□□□ -1.99
COL6A2P12110 RNU1-148P-201ENST00000384472 162 ntBASIC2.59□□□□□ -1.99
COL6A2P12110 Y_RNA.521-201ENST00000384560 114 ntBASIC2.59□□□□□ -1.99
COL6A2P12110 RNU6-959P-201ENST00000384671 107 ntBASIC2.59□□□□□ -1.99
COL6A2P12110 RNA5SP210-201ENST00000391034 120 ntBASIC2.59□□□□□ -1.99
COL6A2P12110 RNU6-257P-201ENST00000410238 98 ntBASIC2.59□□□□□ -1.99
COL6A2P12110 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.59□□□□□ -1.99
COL6A2P12110 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.59□□□□□ -1.99
COL6A2P12110 RNU7-197P-201ENST00000458836 62 ntBASIC2.59□□□□□ -1.99
COL6A2P12110 MIR4662B-201ENST00000579498 81 ntBASIC2.59□□□□□ -1.99
COL6A2P12110 MIR4672-201ENST00000583126 81 ntBASIC2.59□□□□□ -1.99
COL6A2P12110 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.59□□□□□ -1.99
COL6A2P12110 MIR6844-201ENST00000637122 62 ntBASIC2.59□□□□□ -1.99
COL6A2P12110 AC010332.2-201ENST00000613083 1904 ntBASIC2.59□□□□□ -1.99
COL6A2P12110 RNU6-862P-201ENST00000362804 105 ntBASIC2.58□□□□□ -2
COL6A2P12110 Y_RNA.291-201ENST00000364886 113 ntBASIC2.58□□□□□ -2
COL6A2P12110 RNA5SP126-201ENST00000365092 109 ntBASIC2.58□□□□□ -2
COL6A2P12110 RNU6-1117P-201ENST00000384525 104 ntBASIC2.58□□□□□ -2
COL6A2P12110 SNORA8-201ENST00000384574 139 ntBASIC2.58□□□□□ -2
COL6A2P12110 RNA5SP181-201ENST00000410246 98 ntBASIC2.58□□□□□ -2
COL6A2P12110 AC107083.1-201ENST00000439643 279 ntBASIC2.58□□□□□ -2
COL6A2P12110 HMGN1P7-201ENST00000491722 313 ntBASIC2.58□□□□□ -2
COL6A2P12110 RNA5SP282-201ENST00000516355 108 ntBASIC2.58□□□□□ -2
COL6A2P12110 RNA5SP402-201ENST00000517148 110 ntBASIC2.58□□□□□ -2
COL6A2P12110 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.58□□□□□ -2
COL6A2P12110 JPX_2.1-201ENST00000614161 69 ntBASIC2.58□□□□□ -2
COL6A2P12110 AC091895.1-201ENST00000624494 256 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms