Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RNU6-973P-201ENST00000364690 107 ntBASIC-2.81□□□□□ -2.86
TOP2AP11388 SNORD115-35-201ENST00000365122 82 ntBASIC-2.81□□□□□ -2.86
TOP2AP11388 RNU6-291P-201ENST00000384720 107 ntBASIC-2.81□□□□□ -2.86
TOP2AP11388 SNORD93-201ENST00000408813 74 ntBASIC-2.81□□□□□ -2.86
TOP2AP11388 RNU6-1165P-201ENST00000410119 107 ntBASIC-2.81□□□□□ -2.86
TOP2AP11388 MTND1P32-201ENST00000433043 938 ntBASIC-2.81□□□□□ -2.86
TOP2AP11388 AL353813.1-201ENST00000440700 253 ntBASIC-2.81□□□□□ -2.86
TOP2AP11388 U6.101-201ENST00000637707 76 ntBASIC-2.81□□□□□ -2.86
TOP2AP11388 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-2.82□□□□□ -2.86
TOP2AP11388 Y_RNA.13-201ENST00000362403 112 ntBASIC-2.82□□□□□ -2.86
TOP2AP11388 RNU6-228P-201ENST00000362700 106 ntBASIC-2.82□□□□□ -2.86
TOP2AP11388 MIR570-201ENST00000384917 97 ntBASIC-2.82□□□□□ -2.86
TOP2AP11388 RNU6-466P-201ENST00000391224 103 ntBASIC-2.82□□□□□ -2.86
TOP2AP11388 RNU6-293P-201ENST00000411259 106 ntBASIC-2.82□□□□□ -2.86
TOP2AP11388 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-2.82□□□□□ -2.86
TOP2AP11388 AC008134.1-201ENST00000420943 193 ntBASIC-2.82□□□□□ -2.86
TOP2AP11388 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-2.82□□□□□ -2.86
TOP2AP11388 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-2.83□□□□□ -2.86
TOP2AP11388 RNU6-819P-201ENST00000364116 107 ntBASIC-2.83□□□□□ -2.86
TOP2AP11388 MIR562-201ENST00000384894 95 ntBASIC-2.83□□□□□ -2.86
TOP2AP11388 MIRLET7F2-201ENST00000385277 83 ntBASIC-2.83□□□□□ -2.86
TOP2AP11388 SNORD28B-201ENST00000390993 75 ntBASIC-2.83□□□□□ -2.86
TOP2AP11388 SNORD41.1-201ENST00000391000 69 ntBASIC-2.83□□□□□ -2.86
TOP2AP11388 RPS29P13-201ENST00000402041 169 ntBASIC-2.83□□□□□ -2.86
TOP2AP11388 RNA5SP484-201ENST00000458857 111 ntBASIC-2.83□□□□□ -2.86
TOP2AP11388 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-2.83□□□□□ -2.86
TOP2AP11388 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-2.83□□□□□ -2.86
TOP2AP11388 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-2.83□□□□□ -2.86
TOP2AP11388 ELOCP32-201ENST00000548625 324 ntBASIC-2.83□□□□□ -2.86
TOP2AP11388 AC090502.2-201ENST00000549267 280 ntBASIC-2.83□□□□□ -2.86
TOP2AP11388 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-2.83□□□□□ -2.86
TOP2AP11388 AL139418.1-201ENST00000613613 177 ntBASIC-2.83□□□□□ -2.86
TOP2AP11388 MTND1P7-201ENST00000632801 297 ntBASIC-2.83□□□□□ -2.86
TOP2AP11388 AC013437.2-201ENST00000639587 677 ntBASIC-2.83□□□□□ -2.86
TOP2AP11388 Y_RNA.267-201ENST00000364679 109 ntBASIC-2.83□□□□□ -2.86
TOP2AP11388 RNY3P14-201ENST00000384309 102 ntBASIC-2.83□□□□□ -2.86
TOP2AP11388 MTND4P25-201ENST00000441039 533 ntBASIC-2.83□□□□□ -2.86
TOP2AP11388 AC026410.2-201ENST00000460281 156 ntBASIC-2.83□□□□□ -2.86
TOP2AP11388 AC087683.1-201ENST00000591187 441 ntBASIC-2.83□□□□□ -2.86
TOP2AP11388 Z97988.1-201ENST00000637697 135 ntBASIC-2.83□□□□□ -2.86
TOP2AP11388 Y_RNA.33-201ENST00000362591 102 ntBASIC-2.84□□□□□ -2.86
TOP2AP11388 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.84□□□□□ -2.86
TOP2AP11388 Y_RNA.623-201ENST00000411128 95 ntBASIC-2.84□□□□□ -2.86
TOP2AP11388 AL390729.2-201ENST00000416137 156 ntBASIC-2.84□□□□□ -2.86
TOP2AP11388 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-2.84□□□□□ -2.86
TOP2AP11388 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-2.84□□□□□ -2.86
TOP2AP11388 MIR1273C-201ENST00000578669 77 ntBASIC-2.84□□□□□ -2.86
TOP2AP11388 Y_RNA.148-201ENST00000363557 117 ntBASIC-2.85□□□□□ -2.87
TOP2AP11388 Y_RNA.432-201ENST00000384087 111 ntBASIC-2.85□□□□□ -2.87
TOP2AP11388 SNORD38B-201ENST00000384690 67 ntBASIC-2.85□□□□□ -2.87
TOP2AP11388 RNU6-588P-201ENST00000410281 105 ntBASIC-2.85□□□□□ -2.87
TOP2AP11388 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC-2.85□□□□□ -2.87
TOP2AP11388 AC024405.2-202ENST00000532731 184 ntBASIC-2.85□□□□□ -2.87
TOP2AP11388 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-2.85□□□□□ -2.87
TOP2AP11388 AC008752.3-201ENST00000588113 712 ntBASIC-2.85□□□□□ -2.87
TOP2AP11388 AL356055.1-201ENST00000602528 446 ntBASIC-2.85□□□□□ -2.87
TOP2AP11388 AL391834.2-201ENST00000609982 546 ntBASIC-2.85□□□□□ -2.87
TOP2AP11388 MIR6082-201ENST00000613604 109 ntBASIC-2.85□□□□□ -2.87
TOP2AP11388 AC010608.3-201ENST00000625048 527 ntBASIC-2.85□□□□□ -2.87
TOP2AP11388 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-2.86□□□□□ -2.87
TOP2AP11388 RNU6-708P-201ENST00000384217 107 ntBASIC-2.86□□□□□ -2.87
TOP2AP11388 RNU6-1127P-201ENST00000384580 107 ntBASIC-2.86□□□□□ -2.87
TOP2AP11388 Y_RNA.547-201ENST00000384654 119 ntBASIC-2.86□□□□□ -2.87
TOP2AP11388 RNU6-341P-201ENST00000516973 96 ntBASIC-2.86□□□□□ -2.87
TOP2AP11388 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-2.86□□□□□ -2.87
TOP2AP11388 AC023510.2-201ENST00000622162 746 ntBASIC-2.86□□□□□ -2.87
TOP2AP11388 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.87□□□□□ -2.87
TOP2AP11388 Y_RNA.234-201ENST00000364409 97 ntBASIC-2.87□□□□□ -2.87
TOP2AP11388 AL139421.1-201ENST00000423010 169 ntBASIC-2.87□□□□□ -2.87
TOP2AP11388 AC244670.1-201ENST00000436879 112 ntBASIC-2.87□□□□□ -2.87
TOP2AP11388 AC074290.1-201ENST00000448883 135 ntBASIC-2.87□□□□□ -2.87
TOP2AP11388 MTCO1P31-201ENST00000506355 492 ntBASIC-2.87□□□□□ -2.87
TOP2AP11388 SNORA40.17-201ENST00000517256 115 ntBASIC-2.87□□□□□ -2.87
TOP2AP11388 MTND5P34-201ENST00000568888 325 ntBASIC-2.87□□□□□ -2.87
TOP2AP11388 AC087683.2-201ENST00000611384 326 ntBASIC-2.87□□□□□ -2.87
TOP2AP11388 RNU6-137P-201ENST00000363680 108 ntBASIC-2.88□□□□□ -2.87
TOP2AP11388 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.88□□□□□ -2.87
TOP2AP11388 MTATP6P20-201ENST00000414147 562 ntBASIC-2.88□□□□□ -2.87
TOP2AP11388 AC090844.1-201ENST00000422019 156 ntBASIC-2.88□□□□□ -2.87
TOP2AP11388 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-2.88□□□□□ -2.87
TOP2AP11388 MTND1P11-201ENST00000456661 876 ntBASIC-2.88□□□□□ -2.87
TOP2AP11388 Y_RNA.687-201ENST00000516558 91 ntBASIC-2.88□□□□□ -2.87
TOP2AP11388 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-2.88□□□□□ -2.87
TOP2AP11388 AL445523.1-201ENST00000451184 1362 ntBASIC-2.88□□□□□ -2.87
TOP2AP11388 Y_RNA.637-201ENST00000459424 114 ntBASIC-2.88□□□□□ -2.87
TOP2AP11388 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.88□□□□□ -2.87
TOP2AP11388 RNU6-1315P-201ENST00000517187 99 ntBASIC-2.88□□□□□ -2.87
TOP2AP11388 MIR4473-201ENST00000583731 91 ntBASIC-2.88□□□□□ -2.87
TOP2AP11388 Z94722.1-201ENST00000604328 474 ntBASIC-2.88□□□□□ -2.87
TOP2AP11388 RNA5SP245-201ENST00000364239 121 ntBASIC-2.89□□□□□ -2.87
TOP2AP11388 RNU6-855P-201ENST00000410395 104 ntBASIC-2.89□□□□□ -2.87
TOP2AP11388 MTCO3P8-201ENST00000453691 755 ntBASIC-2.89□□□□□ -2.87
TOP2AP11388 AP003072.1-201ENST00000531740 145 ntBASIC-2.89□□□□□ -2.87
TOP2AP11388 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-2.89□□□□□ -2.87
TOP2AP11388 snoZ196.1-201ENST00000625269 89 ntBASIC-2.89□□□□□ -2.87
TOP2AP11388 AC090960.1-201ENST00000421072 306 ntBASIC-2.9□□□□□ -2.87
TOP2AP11388 AC098614.3-201ENST00000438957 440 ntBASIC-2.9□□□□□ -2.87
TOP2AP11388 AL359672.1-201ENST00000442302 409 ntBASIC-2.9□□□□□ -2.87
TOP2AP11388 RNU6-221P-201ENST00000459541 99 ntBASIC-2.9□□□□□ -2.87
TOP2AP11388 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-2.9□□□□□ -2.87
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms