Protein–RNA interactions for Protein: P0CJ79

ZNF888, Zinc finger protein 888, humanhuman

Predicted RBP Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF888P0CJ79 SNORA5B-201ENST00000363786 132 ntBASIC2.55□□□□□ -2
ZNF888P0CJ79 MIR592-201ENST00000384959 97 ntBASIC2.55□□□□□ -2
ZNF888P0CJ79 MIR9-1-201ENST00000385198 89 ntBASIC2.55□□□□□ -2
ZNF888P0CJ79 AL590004.2-201ENST00000404787 371 ntBASIC2.55□□□□□ -2
ZNF888P0CJ79 AC011406.1-201ENST00000512440 370 ntBASIC2.55□□□□□ -2
ZNF888P0CJ79 RNU7-99P-201ENST00000516271 62 ntBASIC2.55□□□□□ -2
ZNF888P0CJ79 RNU6-919P-201ENST00000516731 104 ntBASIC2.55□□□□□ -2
ZNF888P0CJ79 RNU6-826P-201ENST00000516827 104 ntBASIC2.55□□□□□ -2
ZNF888P0CJ79 RNU7-128P-201ENST00000517247 62 ntBASIC2.55□□□□□ -2
ZNF888P0CJ79 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.55□□□□□ -2
ZNF888P0CJ79 AC090049.2-201ENST00000550377 109 ntBASIC2.55□□□□□ -2
ZNF888P0CJ79 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.55□□□□□ -2
ZNF888P0CJ79 MIR4446-201ENST00000578505 67 ntBASIC2.55□□□□□ -2
ZNF888P0CJ79 MIR4635-201ENST00000583759 79 ntBASIC2.55□□□□□ -2
ZNF888P0CJ79 AC007229.1-201ENST00000590455 412 ntBASIC2.55□□□□□ -2
ZNF888P0CJ79 AC073413.2-201ENST00000604332 360 ntBASIC2.55□□□□□ -2
ZNF888P0CJ79 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.55□□□□□ -2
ZNF888P0CJ79 MIR6733-201ENST00000635723 61 ntBASIC2.55□□□□□ -2
ZNF888P0CJ79 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.55□□□□□ -2
ZNF888P0CJ79 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
ZNF888P0CJ79 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ZNF888P0CJ79 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.54□□□□□ -2
ZNF888P0CJ79 Y_RNA.91-201ENST00000363042 107 ntBASIC2.54□□□□□ -2
ZNF888P0CJ79 Y_RNA.120-201ENST00000363304 110 ntBASIC2.54□□□□□ -2
ZNF888P0CJ79 RNU6-461P-201ENST00000364195 107 ntBASIC2.54□□□□□ -2
ZNF888P0CJ79 RNU6-1336P-201ENST00000383886 109 ntBASIC2.54□□□□□ -2
ZNF888P0CJ79 SNORD88.1-201ENST00000408684 91 ntBASIC2.54□□□□□ -2
ZNF888P0CJ79 RNU2-52P-201ENST00000410680 190 ntBASIC2.54□□□□□ -2
ZNF888P0CJ79 SRIP3-201ENST00000413200 219 ntBASIC2.54□□□□□ -2
ZNF888P0CJ79 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.54□□□□□ -2
ZNF888P0CJ79 CYCSP49-201ENST00000420810 319 ntBASIC2.54□□□□□ -2
ZNF888P0CJ79 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.54□□□□□ -2
ZNF888P0CJ79 SNORD109B-201ENST00000458961 67 ntBASIC2.54□□□□□ -2
ZNF888P0CJ79 SNORD109A-201ENST00000459128 67 ntBASIC2.54□□□□□ -2
ZNF888P0CJ79 AL049873.1-201ENST00000480540 376 ntBASIC2.54□□□□□ -2
ZNF888P0CJ79 OR9P1P-201ENST00000496431 281 ntBASIC2.54□□□□□ -2
ZNF888P0CJ79 RNA5SP356-201ENST00000515972 94 ntBASIC2.54□□□□□ -2
ZNF888P0CJ79 SNORA31.15-201ENST00000516771 132 ntBASIC2.54□□□□□ -2
ZNF888P0CJ79 Y_RNA.712-201ENST00000517011 92 ntBASIC2.54□□□□□ -2
ZNF888P0CJ79 RNU6-667P-201ENST00000517186 102 ntBASIC2.54□□□□□ -2
ZNF888P0CJ79 Y_RNA.757-201ENST00000578934 114 ntBASIC2.54□□□□□ -2
ZNF888P0CJ79 AC091178.2-201ENST00000584401 117 ntBASIC2.54□□□□□ -2
ZNF888P0CJ79 JPX_2.1-201ENST00000614161 69 ntBASIC2.54□□□□□ -2
ZNF888P0CJ79 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
ZNF888P0CJ79 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ZNF888P0CJ79 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2
ZNF888P0CJ79 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.53□□□□□ -2
ZNF888P0CJ79 Y_RNA.99-201ENST00000363138 105 ntBASIC2.53□□□□□ -2
ZNF888P0CJ79 AL035461.1-201ENST00000421490 332 ntBASIC2.53□□□□□ -2
ZNF888P0CJ79 RPS15AP28-201ENST00000435088 386 ntBASIC2.53□□□□□ -2
ZNF888P0CJ79 RNU7-149P-201ENST00000516739 59 ntBASIC2.53□□□□□ -2
ZNF888P0CJ79 MIR4319-201ENST00000577285 85 ntBASIC2.53□□□□□ -2
ZNF888P0CJ79 AC131055.1-201ENST00000584626 316 ntBASIC2.53□□□□□ -2
ZNF888P0CJ79 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.52□□□□□ -2.01
ZNF888P0CJ79 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.52□□□□□ -2.01
ZNF888P0CJ79 RNU6-859P-201ENST00000362728 107 ntBASIC2.52□□□□□ -2.01
ZNF888P0CJ79 Y_RNA.280-201ENST00000364765 112 ntBASIC2.52□□□□□ -2.01
ZNF888P0CJ79 RNU6-1325P-201ENST00000364905 105 ntBASIC2.52□□□□□ -2.01
ZNF888P0CJ79 RNU6-1186P-201ENST00000410429 97 ntBASIC2.52□□□□□ -2.01
ZNF888P0CJ79 RNU7-107P-201ENST00000459121 61 ntBASIC2.52□□□□□ -2.01
ZNF888P0CJ79 MIR5194-201ENST00000582634 120 ntBASIC2.52□□□□□ -2.01
ZNF888P0CJ79 Pinc.1-201ENST00000616452 154 ntBASIC2.52□□□□□ -2.01
ZNF888P0CJ79 AC010297.1-201ENST00000623948 149 ntBASIC2.52□□□□□ -2.01
ZNF888P0CJ79 MIR338-201ENST00000636369 67 ntBASIC2.52□□□□□ -2.01
ZNF888P0CJ79 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
ZNF888P0CJ79 AC062016.1-201ENST00000355719 319 ntBASIC2.51□□□□□ -2.01
ZNF888P0CJ79 U8.1-201ENST00000362843 134 ntBASIC2.51□□□□□ -2.01
ZNF888P0CJ79 SNORA25B-201ENST00000365507 128 ntBASIC2.51□□□□□ -2.01
ZNF888P0CJ79 RNU6-1056P-201ENST00000383996 107 ntBASIC2.51□□□□□ -2.01
ZNF888P0CJ79 RNU1-138P-201ENST00000384093 164 ntBASIC2.51□□□□□ -2.01
ZNF888P0CJ79 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
ZNF888P0CJ79 AL158823.1-201ENST00000418441 478 ntBASIC2.51□□□□□ -2.01
ZNF888P0CJ79 RNU1-131P-201ENST00000458943 161 ntBASIC2.51□□□□□ -2.01
ZNF888P0CJ79 Y_RNA.692-201ENST00000516627 105 ntBASIC2.51□□□□□ -2.01
ZNF888P0CJ79 AL358944.1-201ENST00000528537 144 ntBASIC2.51□□□□□ -2.01
ZNF888P0CJ79 AL359075.3-201ENST00000613288 217 ntBASIC2.51□□□□□ -2.01
ZNF888P0CJ79 AC018630.2-201ENST00000534866 2403 ntBASIC2.51□□□□□ -2.01
ZNF888P0CJ79 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.51□□□□□ -2.01
ZNF888P0CJ79 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
ZNF888P0CJ79 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
ZNF888P0CJ79 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.5□□□□□ -2.01
ZNF888P0CJ79 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
ZNF888P0CJ79 Y_RNA.66-201ENST00000362862 102 ntBASIC2.5□□□□□ -2.01
ZNF888P0CJ79 AL445687.1-201ENST00000439946 251 ntBASIC2.5□□□□□ -2.01
ZNF888P0CJ79 RN7SL297P-201ENST00000483161 293 ntBASIC2.5□□□□□ -2.01
ZNF888P0CJ79 NDUFA4P2-201ENST00000489989 244 ntBASIC2.5□□□□□ -2.01
ZNF888P0CJ79 HMGN1P7-201ENST00000491722 313 ntBASIC2.5□□□□□ -2.01
ZNF888P0CJ79 RNA5SP76-201ENST00000516277 87 ntBASIC2.5□□□□□ -2.01
ZNF888P0CJ79 AL365205.2-201ENST00000594586 68 ntBASIC2.5□□□□□ -2.01
ZNF888P0CJ79 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.5□□□□□ -2.01
ZNF888P0CJ79 AL049779.4-201ENST00000604500 156 ntBASIC2.5□□□□□ -2.01
ZNF888P0CJ79 U6.108-201ENST00000637764 58 ntBASIC2.5□□□□□ -2.01
ZNF888P0CJ79 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.5□□□□□ -2.01
ZNF888P0CJ79 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
ZNF888P0CJ79 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.49□□□□□ -2.01
ZNF888P0CJ79 Y_RNA.253-201ENST00000364562 112 ntBASIC2.49□□□□□ -2.01
ZNF888P0CJ79 RNA5SP125-201ENST00000364843 120 ntBASIC2.49□□□□□ -2.01
ZNF888P0CJ79 RNU6-44P-201ENST00000384045 107 ntBASIC2.49□□□□□ -2.01
ZNF888P0CJ79 Y_RNA.486-201ENST00000384398 107 ntBASIC2.49□□□□□ -2.01
ZNF888P0CJ79 MIR624-201ENST00000385217 97 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms