Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AC090572.1-201ENST00000519251 160 ntBASIC-1.59□□□□□ -2.66
HMGN1P05114 AC091144.1-201ENST00000519573 138 ntBASIC-1.59□□□□□ -2.66
HMGN1P05114 MTCO3P23-201ENST00000561363 289 ntBASIC-1.59□□□□□ -2.66
HMGN1P05114 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.59□□□□□ -2.66
HMGN1P05114 MIR6740-201ENST00000618268 113 ntBASIC-1.59□□□□□ -2.66
HMGN1P05114 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.6□□□□□ -2.67
HMGN1P05114 RNU6-107P-201ENST00000516643 102 ntBASIC-1.6□□□□□ -2.67
HMGN1P05114 AP003168.1-201ENST00000530091 307 ntBASIC-1.6□□□□□ -2.67
HMGN1P05114 AC134878.1-201ENST00000619901 243 ntBASIC-1.6□□□□□ -2.67
HMGN1P05114 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.6□□□□□ -2.67
HMGN1P05114 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.61□□□□□ -2.67
HMGN1P05114 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.61□□□□□ -2.67
HMGN1P05114 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.61□□□□□ -2.67
HMGN1P05114 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.61□□□□□ -2.67
HMGN1P05114 MTATP6P26-201ENST00000445926 662 ntBASIC-1.61□□□□□ -2.67
HMGN1P05114 RNA5SP66-201ENST00000517178 101 ntBASIC-1.61□□□□□ -2.67
HMGN1P05114 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.61□□□□□ -2.67
HMGN1P05114 Z94722.1-201ENST00000604328 474 ntBASIC-1.61□□□□□ -2.67
HMGN1P05114 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.61□□□□□ -2.67
HMGN1P05114 MIR101-2-201ENST00000362195 79 ntBASIC-1.62□□□□□ -2.67
HMGN1P05114 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.62□□□□□ -2.67
HMGN1P05114 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.62□□□□□ -2.67
HMGN1P05114 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.62□□□□□ -2.67
HMGN1P05114 SNORA20.2-201ENST00000383922 131 ntBASIC-1.62□□□□□ -2.67
HMGN1P05114 AC073464.1-201ENST00000429823 534 ntBASIC-1.62□□□□□ -2.67
HMGN1P05114 MTND3P1-201ENST00000441336 220 ntBASIC-1.62□□□□□ -2.67
HMGN1P05114 RPL23AP75-201ENST00000491601 451 ntBASIC-1.62□□□□□ -2.67
HMGN1P05114 AL049777.1-201ENST00000622740 518 ntBASIC-1.62□□□□□ -2.67
HMGN1P05114 SNORD116.1-201ENST00000365628 92 ntBASIC-1.63□□□□□ -2.67
HMGN1P05114 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.63□□□□□ -2.67
HMGN1P05114 SNORD73A-201ENST00000386062 65 ntBASIC-1.63□□□□□ -2.67
HMGN1P05114 MIR1265-201ENST00000408444 86 ntBASIC-1.63□□□□□ -2.67
HMGN1P05114 AC010486.3-201ENST00000511602 785 ntBASIC-1.63□□□□□ -2.67
HMGN1P05114 SNORA31.14-201ENST00000516728 116 ntBASIC-1.63□□□□□ -2.67
HMGN1P05114 RNU6-1220P-201ENST00000517126 108 ntBASIC-1.63□□□□□ -2.67
HMGN1P05114 AC244669.1-204ENST00000621564 178 ntBASIC-1.63□□□□□ -2.67
HMGN1P05114 Y_RNA.367-201ENST00000365544 101 ntBASIC-1.64□□□□□ -2.67
HMGN1P05114 U8.17-201ENST00000391292 132 ntBASIC-1.64□□□□□ -2.67
HMGN1P05114 RNU6-855P-201ENST00000410395 104 ntBASIC-1.64□□□□□ -2.67
HMGN1P05114 MTCO2P8-201ENST00000412213 658 ntBASIC-1.64□□□□□ -2.67
HMGN1P05114 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.64□□□□□ -2.67
HMGN1P05114 RNU6-329P-201ENST00000459618 107 ntBASIC-1.64□□□□□ -2.67
HMGN1P05114 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.64□□□□□ -2.67
HMGN1P05114 AL163152.1-201ENST00000642001 374 ntBASIC-1.64□□□□□ -2.67
HMGN1P05114 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.65□□□□□ -2.67
HMGN1P05114 Y_RNA.302-201ENST00000364997 102 ntBASIC-1.65□□□□□ -2.67
HMGN1P05114 SNORA75.4-201ENST00000391278 119 ntBASIC-1.65□□□□□ -2.67
HMGN1P05114 MTCO3P40-201ENST00000392516 676 ntBASIC-1.65□□□□□ -2.67
HMGN1P05114 AL138752.1-201ENST00000452964 351 ntBASIC-1.65□□□□□ -2.67
HMGN1P05114 SCARNA17-201ENST00000516183 144 ntBASIC-1.65□□□□□ -2.67
HMGN1P05114 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.65□□□□□ -2.67
HMGN1P05114 uc_338.11-201ENST00000619132 160 ntBASIC-1.65□□□□□ -2.67
HMGN1P05114 RNU6-280P-201ENST00000364145 104 ntBASIC-1.66□□□□□ -2.68
HMGN1P05114 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.66□□□□□ -2.68
HMGN1P05114 RNU6-131P-201ENST00000391144 107 ntBASIC-1.66□□□□□ -2.68
HMGN1P05114 SSR1P2-201ENST00000415208 787 ntBASIC-1.66□□□□□ -2.68
HMGN1P05114 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-1.66□□□□□ -2.68
HMGN1P05114 MTATP6P23-201ENST00000440153 476 ntBASIC-1.66□□□□□ -2.68
HMGN1P05114 RNU7-138P-201ENST00000459479 64 ntBASIC-1.66□□□□□ -2.68
HMGN1P05114 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.66□□□□□ -2.68
HMGN1P05114 MIR4775-201ENST00000581168 75 ntBASIC-1.66□□□□□ -2.68
HMGN1P05114 AC006441.5-201ENST00000612680 209 ntBASIC-1.66□□□□□ -2.68
HMGN1P05114 AC126544.2-201ENST00000625174 749 ntBASIC-1.66□□□□□ -2.68
HMGN1P05114 SEPT14P19-203ENST00000633205 211 ntBASIC-1.66□□□□□ -2.68
HMGN1P05114 ZNF299P-201ENST00000406845 1804 ntBASIC-1.67□□□□□ -2.68
HMGN1P05114 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.67□□□□□ -2.68
HMGN1P05114 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.67□□□□□ -2.68
HMGN1P05114 SNORD50B-201ENST00000364995 70 ntBASIC-1.67□□□□□ -2.68
HMGN1P05114 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.67□□□□□ -2.68
HMGN1P05114 SNORA1.2-201ENST00000365189 134 ntBASIC-1.67□□□□□ -2.68
HMGN1P05114 Y_RNA.399-201ENST00000383955 105 ntBASIC-1.67□□□□□ -2.68
HMGN1P05114 RNU6-35P-201ENST00000384530 107 ntBASIC-1.67□□□□□ -2.68
HMGN1P05114 RNU6-847P-201ENST00000411115 108 ntBASIC-1.67□□□□□ -2.68
HMGN1P05114 AL354751.2-201ENST00000415471 210 ntBASIC-1.67□□□□□ -2.68
HMGN1P05114 AC090844.1-201ENST00000422019 156 ntBASIC-1.67□□□□□ -2.68
HMGN1P05114 RNU6-881P-201ENST00000516813 102 ntBASIC-1.67□□□□□ -2.68
HMGN1P05114 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.67□□□□□ -2.68
HMGN1P05114 AC010205.1-201ENST00000616668 449 ntBASIC-1.67□□□□□ -2.68
HMGN1P05114 MIR8066-201ENST00000617280 78 ntBASIC-1.67□□□□□ -2.68
HMGN1P05114 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.68□□□□□ -2.68
HMGN1P05114 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.68□□□□□ -2.68
HMGN1P05114 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.68□□□□□ -2.68
HMGN1P05114 RNU6-1029P-201ENST00000384109 107 ntBASIC-1.68□□□□□ -2.68
HMGN1P05114 MIR588-201ENST00000384900 83 ntBASIC-1.68□□□□□ -2.68
HMGN1P05114 AC021146.6-201ENST00000514659 117 ntBASIC-1.68□□□□□ -2.68
HMGN1P05114 RNU6-410P-201ENST00000517006 107 ntBASIC-1.68□□□□□ -2.68
HMGN1P05114 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.68□□□□□ -2.68
HMGN1P05114 RNU6-1192P-201ENST00000612197 107 ntBASIC-1.68□□□□□ -2.68
HMGN1P05114 SNORA70.25-201ENST00000612741 95 ntBASIC-1.68□□□□□ -2.68
HMGN1P05114 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.68□□□□□ -2.68
HMGN1P05114 RNU6-489P-201ENST00000618289 107 ntBASIC-1.68□□□□□ -2.68
HMGN1P05114 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-1.68□□□□□ -2.68
HMGN1P05114 MT-TF-201ENST00000387314 71 ntBASIC-1.69□□□□□ -2.68
HMGN1P05114 Y_RNA.608-201ENST00000410647 95 ntBASIC-1.69□□□□□ -2.68
HMGN1P05114 RNU4-83P-201ENST00000410863 133 ntBASIC-1.69□□□□□ -2.68
HMGN1P05114 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.69□□□□□ -2.68
HMGN1P05114 RNU7-167P-201ENST00000459160 62 ntBASIC-1.69□□□□□ -2.68
HMGN1P05114 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-1.69□□□□□ -2.68
HMGN1P05114 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.69□□□□□ -2.68
HMGN1P05114 AC016550.1-201ENST00000505348 785 ntBASIC-1.69□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms