Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 MIR4762-201ENST00000585261 75 ntBASIC-0.84□□□□□ -2.54
TNFP01375 AP000753.3-201ENST00000604083 169 ntBASIC-0.84□□□□□ -2.54
TNFP01375 SNORD11B-201ENST00000607707 90 ntBASIC-0.84□□□□□ -2.54
TNFP01375 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.85□□□□□ -2.55
TNFP01375 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.85□□□□□ -2.55
TNFP01375 RNU5B-4P-201ENST00000363508 111 ntBASIC-0.85□□□□□ -2.55
TNFP01375 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.85□□□□□ -2.55
TNFP01375 RNU6-723P-201ENST00000383973 107 ntBASIC-0.85□□□□□ -2.55
TNFP01375 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.85□□□□□ -2.55
TNFP01375 MIR147A-201ENST00000385079 72 ntBASIC-0.85□□□□□ -2.55
TNFP01375 MTCO2P33-201ENST00000402100 465 ntBASIC-0.85□□□□□ -2.55
TNFP01375 MTCYBP36-201ENST00000404146 440 ntBASIC-0.85□□□□□ -2.55
TNFP01375 AC096949.1-201ENST00000412047 152 ntBASIC-0.85□□□□□ -2.55
TNFP01375 MTCO2P27-201ENST00000420740 428 ntBASIC-0.85□□□□□ -2.55
TNFP01375 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.85□□□□□ -2.55
TNFP01375 MTCO2P11-201ENST00000431069 680 ntBASIC-0.85□□□□□ -2.55
TNFP01375 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.85□□□□□ -2.55
TNFP01375 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.85□□□□□ -2.55
TNFP01375 GMFBP1-201ENST00000467831 427 ntBASIC-0.85□□□□□ -2.55
TNFP01375 RNU6-469P-201ENST00000516253 101 ntBASIC-0.85□□□□□ -2.55
TNFP01375 RNU6-1003P-201ENST00000517099 105 ntBASIC-0.85□□□□□ -2.55
TNFP01375 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.85□□□□□ -2.55
TNFP01375 MIR5706-201ENST00000579841 80 ntBASIC-0.85□□□□□ -2.55
TNFP01375 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.85□□□□□ -2.55
TNFP01375 SNORD68-201ENST00000363214 84 ntBASIC-0.86□□□□□ -2.55
TNFP01375 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.86□□□□□ -2.55
TNFP01375 RNU6-873P-201ENST00000363833 107 ntBASIC-0.86□□□□□ -2.55
TNFP01375 RNU6-865P-201ENST00000364772 107 ntBASIC-0.86□□□□□ -2.55
TNFP01375 RNU6-715P-201ENST00000365204 103 ntBASIC-0.86□□□□□ -2.55
TNFP01375 MIR517B-201ENST00000385102 67 ntBASIC-0.86□□□□□ -2.55
TNFP01375 U8.17-201ENST00000391292 132 ntBASIC-0.86□□□□□ -2.55
TNFP01375 RNA5SP494-201ENST00000410653 129 ntBASIC-0.86□□□□□ -2.55
TNFP01375 MCFD2P1-201ENST00000417812 300 ntBASIC-0.86□□□□□ -2.55
TNFP01375 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.86□□□□□ -2.55
TNFP01375 RNU7-62P-201ENST00000458856 62 ntBASIC-0.86□□□□□ -2.55
TNFP01375 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-0.86□□□□□ -2.55
TNFP01375 SNORA25.17-201ENST00000517184 124 ntBASIC-0.86□□□□□ -2.55
TNFP01375 AC022616.6-201ENST00000520479 119 ntBASIC-0.86□□□□□ -2.55
TNFP01375 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.86□□□□□ -2.55
TNFP01375 MTND4P33-201ENST00000556706 766 ntBASIC-0.86□□□□□ -2.55
TNFP01375 MIR4307-201ENST00000582802 84 ntBASIC-0.86□□□□□ -2.55
TNFP01375 MIR8068-201ENST00000618032 68 ntBASIC-0.86□□□□□ -2.55
TNFP01375 AC022306.3-201ENST00000619930 550 ntBASIC-0.86□□□□□ -2.55
TNFP01375 MTND5P18-201ENST00000445624 1801 ntBASIC-0.87□□□□□ -2.55
TNFP01375 AL596211.1-201ENST00000569873 2277 ntBASIC-0.87□□□□□ -2.55
TNFP01375 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.87□□□□□ -2.55
TNFP01375 RNU6-560P-201ENST00000364007 108 ntBASIC-0.87□□□□□ -2.55
TNFP01375 RNU6-47P-201ENST00000383866 107 ntBASIC-0.87□□□□□ -2.55
TNFP01375 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.87□□□□□ -2.55
TNFP01375 Y_RNA.576-201ENST00000384781 102 ntBASIC-0.87□□□□□ -2.55
TNFP01375 MIR558-201ENST00000384920 94 ntBASIC-0.87□□□□□ -2.55
TNFP01375 MT-TY-201ENST00000387409 66 ntBASIC-0.87□□□□□ -2.55
TNFP01375 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.87□□□□□ -2.55
TNFP01375 USP9YP21-201ENST00000420603 432 ntBASIC-0.87□□□□□ -2.55
TNFP01375 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.87□□□□□ -2.55
TNFP01375 MIR18B-201ENST00000454574 71 ntBASIC-0.87□□□□□ -2.55
TNFP01375 AF186996.7-201ENST00000492781 209 ntBASIC-0.87□□□□□ -2.55
TNFP01375 AC010598.1-201ENST00000510378 103 ntBASIC-0.87□□□□□ -2.55
TNFP01375 RNA5SP20-201ENST00000515976 84 ntBASIC-0.87□□□□□ -2.55
TNFP01375 AC104576.1-201ENST00000524225 88 ntBASIC-0.87□□□□□ -2.55
TNFP01375 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.87□□□□□ -2.55
TNFP01375 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.87□□□□□ -2.55
TNFP01375 MTND4LP25-201ENST00000570218 163 ntBASIC-0.87□□□□□ -2.55
TNFP01375 MTND3P13-201ENST00000574391 343 ntBASIC-0.87□□□□□ -2.55
TNFP01375 MIR4639-201ENST00000584938 69 ntBASIC-0.87□□□□□ -2.55
TNFP01375 BNIP3P40-201ENST00000596017 556 ntBASIC-0.87□□□□□ -2.55
TNFP01375 AC126544.2-201ENST00000625174 749 ntBASIC-0.87□□□□□ -2.55
TNFP01375 AL445984.1-201ENST00000637834 659 ntBASIC-0.87□□□□□ -2.55
TNFP01375 MIR30D-201ENST00000362283 70 ntBASIC-0.88□□□□□ -2.55
TNFP01375 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.88□□□□□ -2.55
TNFP01375 RNU6-116P-201ENST00000384042 109 ntBASIC-0.88□□□□□ -2.55
TNFP01375 RNU6-784P-201ENST00000384330 106 ntBASIC-0.88□□□□□ -2.55
TNFP01375 RNU6-291P-201ENST00000384720 107 ntBASIC-0.88□□□□□ -2.55
TNFP01375 MIR518F-201ENST00000384973 87 ntBASIC-0.88□□□□□ -2.55
TNFP01375 MIR516B1-201ENST00000385211 90 ntBASIC-0.88□□□□□ -2.55
TNFP01375 MIR450B-201ENST00000401182 78 ntBASIC-0.88□□□□□ -2.55
TNFP01375 USP9YP12-201ENST00000450481 570 ntBASIC-0.88□□□□□ -2.55
TNFP01375 RPL39P5-202ENST00000512505 151 ntBASIC-0.88□□□□□ -2.55
TNFP01375 AC006600.1-201ENST00000572529 153 ntBASIC-0.88□□□□□ -2.55
TNFP01375 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.88□□□□□ -2.55
TNFP01375 POLR3GP1-201ENST00000594073 261 ntBASIC-0.88□□□□□ -2.55
TNFP01375 AL360085.1-201ENST00000604713 532 ntBASIC-0.88□□□□□ -2.55
TNFP01375 AC084368.1-201ENST00000620935 65 ntBASIC-0.88□□□□□ -2.55
TNFP01375 MTND1P7-201ENST00000632801 297 ntBASIC-0.88□□□□□ -2.55
TNFP01375 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.89□□□□□ -2.55
TNFP01375 RNU6-117P-201ENST00000365415 107 ntBASIC-0.89□□□□□ -2.55
TNFP01375 RNU6-540P-201ENST00000384622 101 ntBASIC-0.89□□□□□ -2.55
TNFP01375 AC006210.1-201ENST00000424882 111 ntBASIC-0.89□□□□□ -2.55
TNFP01375 AL031667.1-201ENST00000440222 725 ntBASIC-0.89□□□□□ -2.55
TNFP01375 ZNF114P1-201ENST00000453500 292 ntBASIC-0.89□□□□□ -2.55
TNFP01375 RNU7-188P-201ENST00000517063 64 ntBASIC-0.89□□□□□ -2.55
TNFP01375 AC131281.1-201ENST00000522984 164 ntBASIC-0.89□□□□□ -2.55
TNFP01375 AC140658.3-201ENST00000567603 271 ntBASIC-0.89□□□□□ -2.55
TNFP01375 AL359999.1-201ENST00000604513 294 ntBASIC-0.89□□□□□ -2.55
TNFP01375 AL133255.1-201ENST00000606374 441 ntBASIC-0.89□□□□□ -2.55
TNFP01375 RNU6-88P-201ENST00000606801 100 ntBASIC-0.89□□□□□ -2.55
TNFP01375 RMST_3.1-201ENST00000611651 109 ntBASIC-0.89□□□□□ -2.55
TNFP01375 uc_338.4-201ENST00000616635 176 ntBASIC-0.89□□□□□ -2.55
TNFP01375 AC006386.1-201ENST00000619436 415 ntBASIC-0.89□□□□□ -2.55
TNFP01375 AL049777.1-201ENST00000622740 518 ntBASIC-0.89□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms