Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.59□□□□□ -2.15
CLDN1O95832 Y_RNA.16-201ENST00000362421 102 ntBASIC1.59□□□□□ -2.15
CLDN1O95832 RNA5SP325-201ENST00000363756 130 ntBASIC1.59□□□□□ -2.15
CLDN1O95832 RNU6-196P-201ENST00000384315 107 ntBASIC1.59□□□□□ -2.15
CLDN1O95832 Y_RNA.569-201ENST00000384749 103 ntBASIC1.59□□□□□ -2.15
CLDN1O95832 MIR613-201ENST00000385248 95 ntBASIC1.59□□□□□ -2.15
CLDN1O95832 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
CLDN1O95832 RNU6-710P-201ENST00000410424 105 ntBASIC1.59□□□□□ -2.15
CLDN1O95832 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.59□□□□□ -2.15
CLDN1O95832 AC010154.1-201ENST00000425857 269 ntBASIC1.59□□□□□ -2.15
CLDN1O95832 AC245047.4-201ENST00000433189 144 ntBASIC1.59□□□□□ -2.15
CLDN1O95832 MTCO1P5-201ENST00000433573 344 ntBASIC1.59□□□□□ -2.15
CLDN1O95832 AL135790.2-201ENST00000437701 267 ntBASIC1.59□□□□□ -2.15
CLDN1O95832 SERF1AP1-201ENST00000514575 187 ntBASIC1.59□□□□□ -2.15
CLDN1O95832 RNU2-31P-201ENST00000516954 155 ntBASIC1.59□□□□□ -2.15
CLDN1O95832 RNU6-570P-201ENST00000517051 105 ntBASIC1.59□□□□□ -2.15
CLDN1O95832 AP005660.1-201ENST00000522972 293 ntBASIC1.59□□□□□ -2.15
CLDN1O95832 AC023157.2-201ENST00000540596 141 ntBASIC1.59□□□□□ -2.15
CLDN1O95832 MIR4503-201ENST00000582187 83 ntBASIC1.59□□□□□ -2.15
CLDN1O95832 AC069114.2-201ENST00000604699 304 ntBASIC1.59□□□□□ -2.15
CLDN1O95832 AL359075.3-201ENST00000613288 217 ntBASIC1.59□□□□□ -2.15
CLDN1O95832 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.59□□□□□ -2.15
CLDN1O95832 U6.104-201ENST00000637979 90 ntBASIC1.59□□□□□ -2.15
CLDN1O95832 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.59□□□□□ -2.15
CLDN1O95832 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
CLDN1O95832 Y_RNA.368-201ENST00000365547 113 ntBASIC1.58□□□□□ -2.16
CLDN1O95832 Y_RNA.562-201ENST00000384695 113 ntBASIC1.58□□□□□ -2.16
CLDN1O95832 RNA5SP467-201ENST00000391274 118 ntBASIC1.58□□□□□ -2.16
CLDN1O95832 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.58□□□□□ -2.16
CLDN1O95832 MIR1302-6-201ENST00000408466 90 ntBASIC1.58□□□□□ -2.16
CLDN1O95832 RNA5SP489-201ENST00000410986 109 ntBASIC1.58□□□□□ -2.16
CLDN1O95832 EBAG9P1-201ENST00000418955 543 ntBASIC1.58□□□□□ -2.16
CLDN1O95832 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.58□□□□□ -2.16
CLDN1O95832 RPL23AP6-201ENST00000446637 472 ntBASIC1.58□□□□□ -2.16
CLDN1O95832 RPS27P22-201ENST00000478056 241 ntBASIC1.58□□□□□ -2.16
CLDN1O95832 RNU7-99P-201ENST00000516271 62 ntBASIC1.58□□□□□ -2.16
CLDN1O95832 RNU6-191P-201ENST00000516295 94 ntBASIC1.58□□□□□ -2.16
CLDN1O95832 RNVU1-2-201ENST00000516326 135 ntBASIC1.58□□□□□ -2.16
CLDN1O95832 U4.1-201ENST00000620349 87 ntBASIC1.58□□□□□ -2.16
CLDN1O95832 U1.36-201ENST00000620684 176 ntBASIC1.58□□□□□ -2.16
CLDN1O95832 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.58□□□□□ -2.16
CLDN1O95832 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
CLDN1O95832 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
CLDN1O95832 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CLDN1O95832 UBE2WP1-201ENST00000362030 340 ntBASIC1.57□□□□□ -2.16
CLDN1O95832 RNU4-80P-201ENST00000363200 141 ntBASIC1.57□□□□□ -2.16
CLDN1O95832 RNU6-324P-201ENST00000363957 106 ntBASIC1.57□□□□□ -2.16
CLDN1O95832 Y_RNA.193-201ENST00000363979 102 ntBASIC1.57□□□□□ -2.16
CLDN1O95832 RNY1-201ENST00000364228 113 ntBASIC1.57□□□□□ -2.16
CLDN1O95832 SNORA63D-201ENST00000364359 132 ntBASIC1.57□□□□□ -2.16
CLDN1O95832 RNU6-1019P-201ENST00000364424 107 ntBASIC1.57□□□□□ -2.16
CLDN1O95832 RNU6-407P-201ENST00000365280 104 ntBASIC1.57□□□□□ -2.16
CLDN1O95832 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CLDN1O95832 SNORA53-201ENST00000391141 249 ntBASIC1.57□□□□□ -2.16
CLDN1O95832 RNU6-1337P-201ENST00000516525 95 ntBASIC1.57□□□□□ -2.16
CLDN1O95832 AC004817.2-201ENST00000561794 651 ntBASIC1.57□□□□□ -2.16
CLDN1O95832 MIR3145-201ENST00000580727 82 ntBASIC1.57□□□□□ -2.16
CLDN1O95832 AL078603.1-201ENST00000603824 313 ntBASIC1.57□□□□□ -2.16
CLDN1O95832 MIR502-201ENST00000606349 86 ntBASIC1.57□□□□□ -2.16
CLDN1O95832 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.57□□□□□ -2.16
CLDN1O95832 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.57□□□□□ -2.16
CLDN1O95832 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.56□□□□□ -2.16
CLDN1O95832 Y_RNA.237-201ENST00000364439 102 ntBASIC1.56□□□□□ -2.16
CLDN1O95832 Y_RNA.310-201ENST00000365063 113 ntBASIC1.56□□□□□ -2.16
CLDN1O95832 Y_RNA.456-201ENST00000384232 111 ntBASIC1.56□□□□□ -2.16
CLDN1O95832 RNU6-296P-201ENST00000384608 107 ntBASIC1.56□□□□□ -2.16
CLDN1O95832 RNU6-1248P-201ENST00000391096 64 ntBASIC1.56□□□□□ -2.16
CLDN1O95832 RNA5SP100-201ENST00000410903 110 ntBASIC1.56□□□□□ -2.16
CLDN1O95832 RNA5SP59-201ENST00000410922 110 ntBASIC1.56□□□□□ -2.16
CLDN1O95832 AC009310.1-201ENST00000414414 451 ntBASIC1.56□□□□□ -2.16
CLDN1O95832 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.56□□□□□ -2.16
CLDN1O95832 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.56□□□□□ -2.16
CLDN1O95832 SNORD127-201ENST00000458892 86 ntBASIC1.56□□□□□ -2.16
CLDN1O95832 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.56□□□□□ -2.16
CLDN1O95832 AC107393.1-201ENST00000512403 346 ntBASIC1.56□□□□□ -2.16
CLDN1O95832 RNU6-1278P-201ENST00000516130 107 ntBASIC1.56□□□□□ -2.16
CLDN1O95832 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.56□□□□□ -2.16
CLDN1O95832 RNU7-172P-201ENST00000517125 64 ntBASIC1.56□□□□□ -2.16
CLDN1O95832 AC027419.1-201ENST00000522976 328 ntBASIC1.56□□□□□ -2.16
CLDN1O95832 DEFB108E-201ENST00000524692 240 ntBASIC1.56□□□□□ -2.16
CLDN1O95832 MIR3122-201ENST00000577243 73 ntBASIC1.56□□□□□ -2.16
CLDN1O95832 MIR4255-201ENST00000579351 72 ntBASIC1.56□□□□□ -2.16
CLDN1O95832 MIR3149-201ENST00000584629 83 ntBASIC1.56□□□□□ -2.16
CLDN1O95832 AC004832.4-201ENST00000608952 331 ntBASIC1.56□□□□□ -2.16
CLDN1O95832 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.56□□□□□ -2.16
CLDN1O95832 AL078604.3-201ENST00000615580 211 ntBASIC1.56□□□□□ -2.16
CLDN1O95832 U2.14-201ENST00000615943 113 ntBASIC1.56□□□□□ -2.16
CLDN1O95832 MIR6734-201ENST00000621166 68 ntBASIC1.56□□□□□ -2.16
CLDN1O95832 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.56□□□□□ -2.16
CLDN1O95832 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
CLDN1O95832 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.55□□□□□ -2.16
CLDN1O95832 RNU6-112P-201ENST00000363599 104 ntBASIC1.55□□□□□ -2.16
CLDN1O95832 Y_RNA.172-201ENST00000363765 102 ntBASIC1.55□□□□□ -2.16
CLDN1O95832 Y_RNA.288-201ENST00000364854 92 ntBASIC1.55□□□□□ -2.16
CLDN1O95832 SNORD116-13-201ENST00000384408 92 ntBASIC1.55□□□□□ -2.16
CLDN1O95832 SNORA8-201ENST00000384574 139 ntBASIC1.55□□□□□ -2.16
CLDN1O95832 AL158823.1-201ENST00000418441 478 ntBASIC1.55□□□□□ -2.16
CLDN1O95832 RPL31P63-201ENST00000422565 375 ntBASIC1.55□□□□□ -2.16
CLDN1O95832 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.55□□□□□ -2.16
CLDN1O95832 AC024067.1-201ENST00000426199 223 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms