Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
DDX58O95786 SNORD114-7-201ENST00000362520 77 ntBASIC1.63□□□□□ -2.15
DDX58O95786 Y_RNA.143-201ENST00000363520 106 ntBASIC1.63□□□□□ -2.15
DDX58O95786 SNORD42.2-201ENST00000365570 69 ntBASIC1.63□□□□□ -2.15
DDX58O95786 MIR1302-11-201ENST00000408051 138 ntBASIC1.63□□□□□ -2.15
DDX58O95786 MIR1302-9-201ENST00000408365 138 ntBASIC1.63□□□□□ -2.15
DDX58O95786 MIR1302-10-201ENST00000408734 138 ntBASIC1.63□□□□□ -2.15
DDX58O95786 RNA5SP511-201ENST00000410487 115 ntBASIC1.63□□□□□ -2.15
DDX58O95786 Y_RNA.639-201ENST00000458981 102 ntBASIC1.63□□□□□ -2.15
DDX58O95786 AC099513.1-201ENST00000490423 301 ntBASIC1.63□□□□□ -2.15
DDX58O95786 RNU6-341P-201ENST00000516973 96 ntBASIC1.63□□□□□ -2.15
DDX58O95786 Y_RNA.713-201ENST00000517013 96 ntBASIC1.63□□□□□ -2.15
DDX58O95786 AP002004.2-201ENST00000531656 154 ntBASIC1.63□□□□□ -2.15
DDX58O95786 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.63□□□□□ -2.15
DDX58O95786 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.63□□□□□ -2.15
DDX58O95786 MIR1302-2-201ENST00000607096 138 ntBASIC1.63□□□□□ -2.15
DDX58O95786 AL078604.3-201ENST00000615580 211 ntBASIC1.63□□□□□ -2.15
DDX58O95786 AC073349.3-201ENST00000617616 186 ntBASIC1.63□□□□□ -2.15
DDX58O95786 MIR7111-201ENST00000619751 72 ntBASIC1.63□□□□□ -2.15
DDX58O95786 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
DDX58O95786 RNU6-797P-201ENST00000363101 109 ntBASIC1.62□□□□□ -2.15
DDX58O95786 Y_RNA.269-201ENST00000364685 89 ntBASIC1.62□□□□□ -2.15
DDX58O95786 Y_RNA.329-201ENST00000365209 107 ntBASIC1.62□□□□□ -2.15
DDX58O95786 Y_RNA.535-201ENST00000384612 99 ntBASIC1.62□□□□□ -2.15
DDX58O95786 MIR520G-201ENST00000385064 90 ntBASIC1.62□□□□□ -2.15
DDX58O95786 RNU6-1199P-201ENST00000411249 104 ntBASIC1.62□□□□□ -2.15
DDX58O95786 AL390729.2-201ENST00000416137 156 ntBASIC1.62□□□□□ -2.15
DDX58O95786 AC005042.3-201ENST00000453230 174 ntBASIC1.62□□□□□ -2.15
DDX58O95786 AL049830.1-201ENST00000468034 425 ntBASIC1.62□□□□□ -2.15
DDX58O95786 AC093852.1-201ENST00000503587 266 ntBASIC1.62□□□□□ -2.15
DDX58O95786 RNU6-436P-201ENST00000516171 114 ntBASIC1.62□□□□□ -2.15
DDX58O95786 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
DDX58O95786 AL161722.3-201ENST00000605789 2983 ntBASIC1.62□□□□□ -2.15
DDX58O95786 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.62□□□□□ -2.15
DDX58O95786 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
DDX58O95786 SNORA1B-201ENST00000362535 133 ntBASIC1.61□□□□□ -2.15
DDX58O95786 Y_RNA.331-201ENST00000365267 102 ntBASIC1.61□□□□□ -2.15
DDX58O95786 RNU6-117P-201ENST00000365415 107 ntBASIC1.61□□□□□ -2.15
DDX58O95786 Y_RNA.570-201ENST00000384750 101 ntBASIC1.61□□□□□ -2.15
DDX58O95786 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.61□□□□□ -2.15
DDX58O95786 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.61□□□□□ -2.15
DDX58O95786 RPS27P16-201ENST00000425758 201 ntBASIC1.61□□□□□ -2.15
DDX58O95786 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.61□□□□□ -2.15
DDX58O95786 Y_RNA.631-201ENST00000459607 101 ntBASIC1.61□□□□□ -2.15
DDX58O95786 RNU6-475P-201ENST00000516073 104 ntBASIC1.61□□□□□ -2.15
DDX58O95786 RNU6-966P-201ENST00000516479 104 ntBASIC1.61□□□□□ -2.15
DDX58O95786 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.61□□□□□ -2.15
DDX58O95786 AC091178.2-201ENST00000584401 117 ntBASIC1.61□□□□□ -2.15
DDX58O95786 AC124312.5-201ENST00000604451 268 ntBASIC1.61□□□□□ -2.15
DDX58O95786 AL513423.1-201ENST00000621695 132 ntBASIC1.61□□□□□ -2.15
DDX58O95786 RNU6-53P-201ENST00000365367 106 ntBASIC1.6□□□□□ -2.15
DDX58O95786 RNU6-474P-201ENST00000384243 107 ntBASIC1.6□□□□□ -2.15
DDX58O95786 Y_RNA.462-201ENST00000384268 102 ntBASIC1.6□□□□□ -2.15
DDX58O95786 RNU6-937P-201ENST00000384325 106 ntBASIC1.6□□□□□ -2.15
DDX58O95786 RNU6-21P-201ENST00000384710 107 ntBASIC1.6□□□□□ -2.15
DDX58O95786 AL354751.2-201ENST00000415471 210 ntBASIC1.6□□□□□ -2.15
DDX58O95786 MTCO2P12-201ENST00000427426 682 ntBASIC1.6□□□□□ -2.15
DDX58O95786 HSPE1P13-201ENST00000451143 297 ntBASIC1.6□□□□□ -2.15
DDX58O95786 RNU7-28P-201ENST00000516759 62 ntBASIC1.6□□□□□ -2.15
DDX58O95786 RNU6-988P-201ENST00000519081 107 ntBASIC1.6□□□□□ -2.15
DDX58O95786 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.6□□□□□ -2.15
DDX58O95786 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.6□□□□□ -2.15
DDX58O95786 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
DDX58O95786 Y_RNA.28-201ENST00000362554 111 ntBASIC1.59□□□□□ -2.15
DDX58O95786 Y_RNA.118-201ENST00000363300 101 ntBASIC1.59□□□□□ -2.15
DDX58O95786 MIR1276-201ENST00000408707 83 ntBASIC1.59□□□□□ -2.15
DDX58O95786 RNU4-30P-201ENST00000410245 143 ntBASIC1.59□□□□□ -2.15
DDX58O95786 PMCHL1-202ENST00000423102 261 ntBASIC1.59□□□□□ -2.15
DDX58O95786 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.59□□□□□ -2.15
DDX58O95786 Y_RNA.128-201ENST00000363391 112 ntBASIC1.58□□□□□ -2.16
DDX58O95786 Y_RNA.361-201ENST00000365515 120 ntBASIC1.58□□□□□ -2.16
DDX58O95786 Y_RNA.389-201ENST00000383924 113 ntBASIC1.58□□□□□ -2.16
DDX58O95786 Y_RNA.394-201ENST00000383942 103 ntBASIC1.58□□□□□ -2.16
DDX58O95786 Y_RNA.508-201ENST00000384502 114 ntBASIC1.58□□□□□ -2.16
DDX58O95786 RNU6-101P-201ENST00000410323 104 ntBASIC1.58□□□□□ -2.16
DDX58O95786 AL162725.1-201ENST00000435405 301 ntBASIC1.58□□□□□ -2.16
DDX58O95786 RNU6-397P-201ENST00000516226 104 ntBASIC1.58□□□□□ -2.16
DDX58O95786 RNA5SP168-201ENST00000516642 112 ntBASIC1.58□□□□□ -2.16
DDX58O95786 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.58□□□□□ -2.16
DDX58O95786 MIR4778-201ENST00000577635 80 ntBASIC1.58□□□□□ -2.16
DDX58O95786 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.58□□□□□ -2.16
DDX58O95786 PRR13P7-201ENST00000605538 430 ntBASIC1.58□□□□□ -2.16
DDX58O95786 AC106754.2-201ENST00000623006 233 ntBASIC1.58□□□□□ -2.16
DDX58O95786 RNU4-76P-201ENST00000364509 141 ntBASIC1.57□□□□□ -2.16
DDX58O95786 SNORD116-13-201ENST00000384408 92 ntBASIC1.57□□□□□ -2.16
DDX58O95786 RNA5SP482-201ENST00000391269 118 ntBASIC1.57□□□□□ -2.16
DDX58O95786 RNU6-855P-201ENST00000410395 104 ntBASIC1.57□□□□□ -2.16
DDX58O95786 RNU2-61P-201ENST00000411069 191 ntBASIC1.57□□□□□ -2.16
DDX58O95786 AC024067.1-201ENST00000426199 223 ntBASIC1.57□□□□□ -2.16
DDX58O95786 CALM2P4-201ENST00000430810 426 ntBASIC1.57□□□□□ -2.16
DDX58O95786 RPS29P23-201ENST00000458635 123 ntBASIC1.57□□□□□ -2.16
DDX58O95786 AC068338.1-201ENST00000565567 176 ntBASIC1.57□□□□□ -2.16
DDX58O95786 MIR4423-201ENST00000580922 80 ntBASIC1.57□□□□□ -2.16
DDX58O95786 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.57□□□□□ -2.16
DDX58O95786 MIR8065-201ENST00000620577 100 ntBASIC1.57□□□□□ -2.16
DDX58O95786 AC134503.1-201ENST00000633048 54 ntBASIC1.57□□□□□ -2.16
DDX58O95786 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.57□□□□□ -2.16
DDX58O95786 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
DDX58O95786 Y_RNA.148-201ENST00000363557 117 ntBASIC1.56□□□□□ -2.16
DDX58O95786 Y_RNA.172-201ENST00000363765 102 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 179.4 ms