Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 Y_RNA.813-201ENST00000364639 102 ntBASIC1.61□□□□□ -2.15
RTN3O95197 SNORD63-201ENST00000384262 68 ntBASIC1.61□□□□□ -2.15
RTN3O95197 Y_RNA.471-201ENST00000384312 102 ntBASIC1.61□□□□□ -2.15
RTN3O95197 Y_RNA.535-201ENST00000384612 99 ntBASIC1.61□□□□□ -2.15
RTN3O95197 RNU6-710P-201ENST00000410424 105 ntBASIC1.61□□□□□ -2.15
RTN3O95197 RPL30P13-201ENST00000418873 348 ntBASIC1.61□□□□□ -2.15
RTN3O95197 RPS27P16-201ENST00000425758 201 ntBASIC1.61□□□□□ -2.15
RTN3O95197 AC092473.1-201ENST00000441098 221 ntBASIC1.61□□□□□ -2.15
RTN3O95197 RPEP5-201ENST00000441137 268 ntBASIC1.61□□□□□ -2.15
RTN3O95197 snoU13.18-201ENST00000459483 104 ntBASIC1.61□□□□□ -2.15
RTN3O95197 AL049830.1-201ENST00000468034 425 ntBASIC1.61□□□□□ -2.15
RTN3O95197 OR9P1P-201ENST00000496431 281 ntBASIC1.61□□□□□ -2.15
RTN3O95197 AP001485.1-201ENST00000604799 199 ntBASIC1.61□□□□□ -2.15
RTN3O95197 AC011373.1-201ENST00000607270 237 ntBASIC1.61□□□□□ -2.15
RTN3O95197 AL512598.1-201ENST00000610158 273 ntBASIC1.61□□□□□ -2.15
RTN3O95197 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.6□□□□□ -2.15
RTN3O95197 RNU1-42P-201ENST00000364033 160 ntBASIC1.6□□□□□ -2.15
RTN3O95197 Y_RNA.224-201ENST00000364308 111 ntBASIC1.6□□□□□ -2.15
RTN3O95197 Y_RNA.329-201ENST00000365209 107 ntBASIC1.6□□□□□ -2.15
RTN3O95197 Y_RNA.331-201ENST00000365267 102 ntBASIC1.6□□□□□ -2.15
RTN3O95197 RNU6-424P-201ENST00000384367 105 ntBASIC1.6□□□□□ -2.15
RTN3O95197 RNU6-308P-201ENST00000390957 107 ntBASIC1.6□□□□□ -2.15
RTN3O95197 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.6□□□□□ -2.15
RTN3O95197 RNU7-110P-201ENST00000516891 62 ntBASIC1.6□□□□□ -2.15
RTN3O95197 SNORA31.24-201ENST00000517232 57 ntBASIC1.6□□□□□ -2.15
RTN3O95197 AL645939.4-201ENST00000604495 135 ntBASIC1.6□□□□□ -2.15
RTN3O95197 AP000648.3-201ENST00000623539 4507 ntBASIC1.6□□□□□ -2.15
RTN3O95197 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
RTN3O95197 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
RTN3O95197 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
RTN3O95197 SNORD116-13-201ENST00000384408 92 ntBASIC1.59□□□□□ -2.15
RTN3O95197 PMCHL1-202ENST00000423102 261 ntBASIC1.59□□□□□ -2.15
RTN3O95197 Y_RNA.631-201ENST00000459607 101 ntBASIC1.59□□□□□ -2.15
RTN3O95197 RNA5SP168-201ENST00000516642 112 ntBASIC1.59□□□□□ -2.15
RTN3O95197 AL078604.3-201ENST00000615580 211 ntBASIC1.59□□□□□ -2.15
RTN3O95197 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
RTN3O95197 Y_RNA.31-201ENST00000362574 102 ntBASIC1.58□□□□□ -2.16
RTN3O95197 Y_RNA.551-201ENST00000384661 102 ntBASIC1.58□□□□□ -2.16
RTN3O95197 MIR1323-201ENST00000408090 73 ntBASIC1.58□□□□□ -2.16
RTN3O95197 CALM2P4-201ENST00000430810 426 ntBASIC1.58□□□□□ -2.16
RTN3O95197 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.58□□□□□ -2.16
RTN3O95197 RPS4XP11-201ENST00000446897 772 ntBASIC1.58□□□□□ -2.16
RTN3O95197 DNAJC19P9-201ENST00000555084 351 ntBASIC1.58□□□□□ -2.16
RTN3O95197 MIR7974-201ENST00000615835 79 ntBASIC1.58□□□□□ -2.16
RTN3O95197 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.58□□□□□ -2.16
RTN3O95197 Y_RNA.28-201ENST00000362554 111 ntBASIC1.57□□□□□ -2.16
RTN3O95197 RNU6-797P-201ENST00000363101 109 ntBASIC1.57□□□□□ -2.16
RTN3O95197 Y_RNA.143-201ENST00000363520 106 ntBASIC1.57□□□□□ -2.16
RTN3O95197 RNU4-76P-201ENST00000364509 141 ntBASIC1.57□□□□□ -2.16
RTN3O95197 SNORA63.7-201ENST00000365579 123 ntBASIC1.57□□□□□ -2.16
RTN3O95197 RNU6-937P-201ENST00000384325 106 ntBASIC1.57□□□□□ -2.16
RTN3O95197 U8.16-201ENST00000391279 133 ntBASIC1.57□□□□□ -2.16
RTN3O95197 MIR1304-201ENST00000408243 91 ntBASIC1.57□□□□□ -2.16
RTN3O95197 AC024067.1-201ENST00000426199 223 ntBASIC1.57□□□□□ -2.16
RTN3O95197 RPL39P38-201ENST00000467018 153 ntBASIC1.57□□□□□ -2.16
RTN3O95197 RNU6-988P-201ENST00000519081 107 ntBASIC1.57□□□□□ -2.16
RTN3O95197 AC022616.4-201ENST00000522985 181 ntBASIC1.57□□□□□ -2.16
RTN3O95197 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.57□□□□□ -2.16
RTN3O95197 AL160236.1-201ENST00000556317 195 ntBASIC1.57□□□□□ -2.16
RTN3O95197 AC004832.4-201ENST00000608952 331 ntBASIC1.57□□□□□ -2.16
RTN3O95197 Y_RNA.128-201ENST00000363391 112 ntBASIC1.56□□□□□ -2.16
RTN3O95197 Y_RNA.148-201ENST00000363557 117 ntBASIC1.56□□□□□ -2.16
RTN3O95197 RNU6-21P-201ENST00000384710 107 ntBASIC1.56□□□□□ -2.16
RTN3O95197 RNU6-955P-201ENST00000410497 104 ntBASIC1.56□□□□□ -2.16
RTN3O95197 AL135790.2-201ENST00000437701 267 ntBASIC1.56□□□□□ -2.16
RTN3O95197 RPL30P7-201ENST00000479312 323 ntBASIC1.56□□□□□ -2.16
RTN3O95197 AC011604.1-201ENST00000545978 196 ntBASIC1.56□□□□□ -2.16
RTN3O95197 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.56□□□□□ -2.16
RTN3O95197 MIR4778-201ENST00000577635 80 ntBASIC1.56□□□□□ -2.16
RTN3O95197 AC005972.2-201ENST00000604690 348 ntBASIC1.56□□□□□ -2.16
RTN3O95197 AL161722.3-201ENST00000605789 2983 ntBASIC1.56□□□□□ -2.16
RTN3O95197 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.56□□□□□ -2.16
RTN3O95197 AC134503.1-201ENST00000633048 54 ntBASIC1.56□□□□□ -2.16
RTN3O95197 MTND4P29-201ENST00000503122 1372 ntBASIC1.56□□□□□ -2.16
RTN3O95197 RNU6-199P-201ENST00000362954 107 ntBASIC1.55□□□□□ -2.16
RTN3O95197 RNU4-41P-201ENST00000364426 143 ntBASIC1.55□□□□□ -2.16
RTN3O95197 RNU6-474P-201ENST00000384243 107 ntBASIC1.55□□□□□ -2.16
RTN3O95197 RNU6-855P-201ENST00000410395 104 ntBASIC1.55□□□□□ -2.16
RTN3O95197 Y_RNA.621-201ENST00000411065 96 ntBASIC1.55□□□□□ -2.16
RTN3O95197 AL354695.1-201ENST00000427935 228 ntBASIC1.55□□□□□ -2.16
RTN3O95197 RPS20P10-201ENST00000451209 253 ntBASIC1.55□□□□□ -2.16
RTN3O95197 RNU7-95P-201ENST00000459222 64 ntBASIC1.55□□□□□ -2.16
RTN3O95197 AC023790.1-201ENST00000482174 347 ntBASIC1.55□□□□□ -2.16
RTN3O95197 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.55□□□□□ -2.16
RTN3O95197 AL512310.8-201ENST00000550183 120 ntBASIC1.55□□□□□ -2.16
RTN3O95197 AC124312.5-201ENST00000604451 268 ntBASIC1.55□□□□□ -2.16
RTN3O95197 PART1_1.1-201ENST00000611761 217 ntBASIC1.55□□□□□ -2.16
RTN3O95197 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.55□□□□□ -2.16
RTN3O95197 AC106754.2-201ENST00000623006 233 ntBASIC1.55□□□□□ -2.16
RTN3O95197 ZNF209P-201ENST00000593450 2304 ntBASIC1.55□□□□□ -2.16
RTN3O95197 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RTN3O95197 Y_RNA.172-201ENST00000363765 102 ntBASIC1.54□□□□□ -2.16
RTN3O95197 RNU6-1105P-201ENST00000384774 107 ntBASIC1.54□□□□□ -2.16
RTN3O95197 MIR7-2-201ENST00000384970 110 ntBASIC1.54□□□□□ -2.16
RTN3O95197 MIR150-201ENST00000385048 84 ntBASIC1.54□□□□□ -2.16
RTN3O95197 RNU4-30P-201ENST00000410245 143 ntBASIC1.54□□□□□ -2.16
RTN3O95197 RNU6-130P-201ENST00000411112 103 ntBASIC1.54□□□□□ -2.16
RTN3O95197 Z98949.2-201ENST00000440996 144 ntBASIC1.54□□□□□ -2.16
RTN3O95197 AC092991.1-201ENST00000477176 376 ntBASIC1.54□□□□□ -2.16
RTN3O95197 RNU7-12P-201ENST00000516030 62 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms