Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AC090844.1-201ENST00000422019 156 ntBASIC-1.59□□□□□ -2.66
LTN1O94822 BX276092.1-201ENST00000427368 251 ntBASIC-1.59□□□□□ -2.66
LTN1O94822 SNRPGP10-201ENST00000432323 225 ntBASIC-1.59□□□□□ -2.66
LTN1O94822 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.59□□□□□ -2.66
LTN1O94822 RNA5SP20-201ENST00000515976 84 ntBASIC-1.59□□□□□ -2.66
LTN1O94822 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.59□□□□□ -2.66
LTN1O94822 AC137590.2-201ENST00000619709 240 ntBASIC-1.59□□□□□ -2.66
LTN1O94822 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.59□□□□□ -2.66
LTN1O94822 SNORD38C-201ENST00000384381 69 ntBASIC-1.59□□□□□ -2.66
LTN1O94822 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.59□□□□□ -2.66
LTN1O94822 AC006210.1-201ENST00000424882 111 ntBASIC-1.59□□□□□ -2.66
LTN1O94822 MRPS10P1-201ENST00000448483 130 ntBASIC-1.59□□□□□ -2.66
LTN1O94822 AL031274.1-201ENST00000450334 232 ntBASIC-1.59□□□□□ -2.66
LTN1O94822 AL138752.1-201ENST00000452964 351 ntBASIC-1.59□□□□□ -2.66
LTN1O94822 MTCO3P38-201ENST00000468910 766 ntBASIC-1.59□□□□□ -2.66
LTN1O94822 RNA5SP54-201ENST00000516951 92 ntBASIC-1.59□□□□□ -2.66
LTN1O94822 SNORD11B-201ENST00000607707 90 ntBASIC-1.59□□□□□ -2.66
LTN1O94822 AC092574.1-201ENST00000609771 420 ntBASIC-1.59□□□□□ -2.66
LTN1O94822 uc_338.10-201ENST00000621872 182 ntBASIC-1.59□□□□□ -2.66
LTN1O94822 AL445523.1-201ENST00000451184 1362 ntBASIC-1.6□□□□□ -2.67
LTN1O94822 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-1.6□□□□□ -2.67
LTN1O94822 RNU6-245P-201ENST00000384020 107 ntBASIC-1.6□□□□□ -2.67
LTN1O94822 SNORA1-201ENST00000384107 130 ntBASIC-1.6□□□□□ -2.67
LTN1O94822 RNU6-190P-201ENST00000384154 102 ntBASIC-1.6□□□□□ -2.67
LTN1O94822 U8.17-201ENST00000391292 132 ntBASIC-1.6□□□□□ -2.67
LTN1O94822 SNORD110-201ENST00000408189 75 ntBASIC-1.6□□□□□ -2.67
LTN1O94822 SNORD93-201ENST00000408813 74 ntBASIC-1.6□□□□□ -2.67
LTN1O94822 SSR1P2-201ENST00000415208 787 ntBASIC-1.6□□□□□ -2.67
LTN1O94822 MTATP6P26-201ENST00000445926 662 ntBASIC-1.6□□□□□ -2.67
LTN1O94822 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.6□□□□□ -2.67
LTN1O94822 MTND5P34-201ENST00000568888 325 ntBASIC-1.6□□□□□ -2.67
LTN1O94822 MIR4499-201ENST00000584834 69 ntBASIC-1.6□□□□□ -2.67
LTN1O94822 AC068137.4-201ENST00000638485 296 ntBASIC-1.6□□□□□ -2.67
LTN1O94822 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-1.61□□□□□ -2.67
LTN1O94822 SEPT14P24-201ENST00000447236 180 ntBASIC-1.61□□□□□ -2.67
LTN1O94822 AC010598.1-201ENST00000510378 103 ntBASIC-1.61□□□□□ -2.67
LTN1O94822 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-1.61□□□□□ -2.67
LTN1O94822 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-1.61□□□□□ -2.67
LTN1O94822 RNU6-509P-201ENST00000363519 107 ntBASIC-1.62□□□□□ -2.67
LTN1O94822 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.62□□□□□ -2.67
LTN1O94822 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1.62□□□□□ -2.67
LTN1O94822 UQCRBP2-201ENST00000447827 297 ntBASIC-1.62□□□□□ -2.67
LTN1O94822 RNU7-51P-201ENST00000516560 62 ntBASIC-1.62□□□□□ -2.67
LTN1O94822 RNY4P7-201ENST00000364600 96 ntBASIC-1.62□□□□□ -2.67
LTN1O94822 MT-TF-201ENST00000387314 71 ntBASIC-1.62□□□□□ -2.67
LTN1O94822 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.62□□□□□ -2.67
LTN1O94822 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.62□□□□□ -2.67
LTN1O94822 MTND4LP7-201ENST00000431728 294 ntBASIC-1.62□□□□□ -2.67
LTN1O94822 AL359672.1-201ENST00000442302 409 ntBASIC-1.62□□□□□ -2.67
LTN1O94822 snoU13.6-201ENST00000458785 104 ntBASIC-1.62□□□□□ -2.67
LTN1O94822 RNU6-901P-201ENST00000384593 106 ntBASIC-1.63□□□□□ -2.67
LTN1O94822 USP9YP16-201ENST00000430287 407 ntBASIC-1.63□□□□□ -2.67
LTN1O94822 MTND4P18-201ENST00000447010 465 ntBASIC-1.63□□□□□ -2.67
LTN1O94822 RNU6-274P-201ENST00000459566 107 ntBASIC-1.63□□□□□ -2.67
LTN1O94822 AC011352.1-201ENST00000512300 793 ntBASIC-1.63□□□□□ -2.67
LTN1O94822 SNORD45.4-201ENST00000516629 73 ntBASIC-1.63□□□□□ -2.67
LTN1O94822 RNU6-323P-201ENST00000521915 107 ntBASIC-1.63□□□□□ -2.67
LTN1O94822 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.63□□□□□ -2.67
LTN1O94822 Y_RNA.480-201ENST00000384364 102 ntBASIC-1.64□□□□□ -2.67
LTN1O94822 RNU6-455P-201ENST00000384681 107 ntBASIC-1.64□□□□□ -2.67
LTN1O94822 RNU2-11P-201ENST00000459191 187 ntBASIC-1.64□□□□□ -2.67
LTN1O94822 AC010587.1-201ENST00000505809 469 ntBASIC-1.64□□□□□ -2.67
LTN1O94822 AC073539.2-201ENST00000597113 165 ntBASIC-1.64□□□□□ -2.67
LTN1O94822 RNU6-721P-201ENST00000410155 105 ntBASIC-1.64□□□□□ -2.67
LTN1O94822 CALM2P2-201ENST00000428512 440 ntBASIC-1.64□□□□□ -2.67
LTN1O94822 AC107934.1-201ENST00000522215 217 ntBASIC-1.64□□□□□ -2.67
LTN1O94822 AC099785.1-201ENST00000605697 437 ntBASIC-1.64□□□□□ -2.67
LTN1O94822 AC008873.1-201ENST00000625051 138 ntBASIC-1.64□□□□□ -2.67
LTN1O94822 MIR16-2-201ENST00000362117 81 ntBASIC-1.65□□□□□ -2.67
LTN1O94822 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.65□□□□□ -2.67
LTN1O94822 SNORD87-201ENST00000364849 89 ntBASIC-1.65□□□□□ -2.67
LTN1O94822 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.65□□□□□ -2.67
LTN1O94822 MIR518B-201ENST00000385127 83 ntBASIC-1.65□□□□□ -2.67
LTN1O94822 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.65□□□□□ -2.67
LTN1O94822 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-1.65□□□□□ -2.67
LTN1O94822 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-1.65□□□□□ -2.67
LTN1O94822 AC091959.1-201ENST00000495857 238 ntBASIC-1.65□□□□□ -2.67
LTN1O94822 RNA5SP180-201ENST00000516181 101 ntBASIC-1.65□□□□□ -2.67
LTN1O94822 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-1.65□□□□□ -2.67
LTN1O94822 AC072039.2-201ENST00000608883 439 ntBASIC-1.65□□□□□ -2.67
LTN1O94822 uc_338.19-201ENST00000616808 99 ntBASIC-1.65□□□□□ -2.67
LTN1O94822 SNORD50B-201ENST00000364995 70 ntBASIC-1.66□□□□□ -2.68
LTN1O94822 RNU6-407P-201ENST00000365280 104 ntBASIC-1.66□□□□□ -2.68
LTN1O94822 RNA5SP494-201ENST00000410653 129 ntBASIC-1.66□□□□□ -2.68
LTN1O94822 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.66□□□□□ -2.68
LTN1O94822 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.66□□□□□ -2.68
LTN1O94822 MTND5P18-201ENST00000445624 1801 ntBASIC-1.66□□□□□ -2.68
LTN1O94822 RNU6-61P-201ENST00000365528 109 ntBASIC-1.67□□□□□ -2.68
LTN1O94822 RNU6-847P-201ENST00000411115 108 ntBASIC-1.67□□□□□ -2.68
LTN1O94822 MTND1P32-201ENST00000433043 938 ntBASIC-1.67□□□□□ -2.68
LTN1O94822 AF186996.7-201ENST00000492781 209 ntBASIC-1.67□□□□□ -2.68
LTN1O94822 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.67□□□□□ -2.68
LTN1O94822 AF250324.2-201ENST00000608299 610 ntBASIC-1.67□□□□□ -2.68
LTN1O94822 MIR8055-201ENST00000610739 97 ntBASIC-1.67□□□□□ -2.68
LTN1O94822 AC013437.2-201ENST00000639587 677 ntBASIC-1.67□□□□□ -2.68
LTN1O94822 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.67□□□□□ -2.68
LTN1O94822 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.67□□□□□ -2.68
LTN1O94822 RNU6-602P-201ENST00000411155 105 ntBASIC-1.67□□□□□ -2.68
LTN1O94822 MTND4P3-201ENST00000417829 541 ntBASIC-1.67□□□□□ -2.68
LTN1O94822 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-1.67□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms