Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 Y_RNA.361-201ENST00000365515 120 ntBASIC0.32□□□□□ -2.36
UPK1BO75841 AL139396.1-201ENST00000421137 167 ntBASIC0.32□□□□□ -2.36
UPK1BO75841 MRPS18CP6-201ENST00000423587 223 ntBASIC0.32□□□□□ -2.36
UPK1BO75841 AL392103.1-201ENST00000447000 198 ntBASIC0.32□□□□□ -2.36
UPK1BO75841 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.32□□□□□ -2.36
UPK1BO75841 MTND5P5-201ENST00000503764 376 ntBASIC0.32□□□□□ -2.36
UPK1BO75841 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.32□□□□□ -2.36
UPK1BO75841 SNORA68.3-201ENST00000515906 83 ntBASIC0.32□□□□□ -2.36
UPK1BO75841 RNU4-57P-201ENST00000515980 135 ntBASIC0.32□□□□□ -2.36
UPK1BO75841 RNU6-237P-201ENST00000515985 71 ntBASIC0.32□□□□□ -2.36
UPK1BO75841 RNU4-49P-201ENST00000516080 140 ntBASIC0.32□□□□□ -2.36
UPK1BO75841 Y_RNA.670-201ENST00000516255 105 ntBASIC0.32□□□□□ -2.36
UPK1BO75841 MIR4298-201ENST00000584380 73 ntBASIC0.32□□□□□ -2.36
UPK1BO75841 AC136443.5-201ENST00000603741 370 ntBASIC0.32□□□□□ -2.36
UPK1BO75841 MIR4251-201ENST00000635819 61 ntBASIC0.32□□□□□ -2.36
UPK1BO75841 RNU6-1301P-201ENST00000362724 104 ntBASIC0.31□□□□□ -2.36
UPK1BO75841 RNU6-961P-201ENST00000363893 105 ntBASIC0.31□□□□□ -2.36
UPK1BO75841 MIR15B-201ENST00000385045 98 ntBASIC0.31□□□□□ -2.36
UPK1BO75841 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
UPK1BO75841 SNORD28B-201ENST00000390993 75 ntBASIC0.31□□□□□ -2.36
UPK1BO75841 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.31□□□□□ -2.36
UPK1BO75841 RNU6-1050P-201ENST00000410388 107 ntBASIC0.31□□□□□ -2.36
UPK1BO75841 AC114737.2-201ENST00000421583 173 ntBASIC0.31□□□□□ -2.36
UPK1BO75841 RNU6-329P-201ENST00000459618 107 ntBASIC0.31□□□□□ -2.36
UPK1BO75841 AC093534.1-201ENST00000504977 132 ntBASIC0.31□□□□□ -2.36
UPK1BO75841 RNU11-2P-201ENST00000516898 142 ntBASIC0.31□□□□□ -2.36
UPK1BO75841 AC018638.8-201ENST00000588755 281 ntBASIC0.31□□□□□ -2.36
UPK1BO75841 MIR1-1-201ENST00000362147 71 ntBASIC0.3□□□□□ -2.36
UPK1BO75841 Y_RNA.89-201ENST00000363031 102 ntBASIC0.3□□□□□ -2.36
UPK1BO75841 Y_RNA.148-201ENST00000363557 117 ntBASIC0.3□□□□□ -2.36
UPK1BO75841 RNA5SP499-201ENST00000363982 119 ntBASIC0.3□□□□□ -2.36
UPK1BO75841 snoU2-30.1-201ENST00000365012 70 ntBASIC0.3□□□□□ -2.36
UPK1BO75841 Y_RNA.554-201ENST00000384672 102 ntBASIC0.3□□□□□ -2.36
UPK1BO75841 AL031003.1-201ENST00000404229 172 ntBASIC0.3□□□□□ -2.36
UPK1BO75841 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.3□□□□□ -2.36
UPK1BO75841 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.3□□□□□ -2.36
UPK1BO75841 AC005534.2-201ENST00000431047 433 ntBASIC0.3□□□□□ -2.36
UPK1BO75841 SNRPGP10-201ENST00000432323 225 ntBASIC0.3□□□□□ -2.36
UPK1BO75841 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.3□□□□□ -2.36
UPK1BO75841 AL603825.1-201ENST00000438481 80 ntBASIC0.3□□□□□ -2.36
UPK1BO75841 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.3□□□□□ -2.36
UPK1BO75841 AC098826.2-201ENST00000452011 651 ntBASIC0.3□□□□□ -2.36
UPK1BO75841 RPL7P42-201ENST00000481005 679 ntBASIC0.3□□□□□ -2.36
UPK1BO75841 MTND2P38-201ENST00000522536 667 ntBASIC0.3□□□□□ -2.36
UPK1BO75841 MIR1244-1-201ENST00000612829 85 ntBASIC0.3□□□□□ -2.36
UPK1BO75841 AC015540.1-201ENST00000615828 501 ntBASIC0.3□□□□□ -2.36
UPK1BO75841 AC008133.2-201ENST00000624540 351 ntBASIC0.3□□□□□ -2.36
UPK1BO75841 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.3□□□□□ -2.36
UPK1BO75841 MIR1244-3-201ENST00000635744 85 ntBASIC0.3□□□□□ -2.36
UPK1BO75841 MIR1244-2-201ENST00000636449 85 ntBASIC0.3□□□□□ -2.36
UPK1BO75841 MIR1244-4-202ENST00000636813 85 ntBASIC0.3□□□□□ -2.36
UPK1BO75841 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
UPK1BO75841 RNY4P14-201ENST00000363656 96 ntBASIC0.29□□□□□ -2.36
UPK1BO75841 RNU6-926P-201ENST00000384075 107 ntBASIC0.29□□□□□ -2.36
UPK1BO75841 AC092628.1-201ENST00000436250 252 ntBASIC0.29□□□□□ -2.36
UPK1BO75841 RN7SKP12-201ENST00000516275 143 ntBASIC0.29□□□□□ -2.36
UPK1BO75841 RNU6-1016P-201ENST00000516689 94 ntBASIC0.29□□□□□ -2.36
UPK1BO75841 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.29□□□□□ -2.36
UPK1BO75841 MIR548AR-201ENST00000582191 57 ntBASIC0.29□□□□□ -2.36
UPK1BO75841 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.29□□□□□ -2.36
UPK1BO75841 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.29□□□□□ -2.36
UPK1BO75841 RNA5SP347-201ENST00000362445 119 ntBASIC0.28□□□□□ -2.36
UPK1BO75841 Y_RNA.101-201ENST00000363154 102 ntBASIC0.28□□□□□ -2.36
UPK1BO75841 Y_RNA.368-201ENST00000365547 113 ntBASIC0.28□□□□□ -2.36
UPK1BO75841 MIR570-201ENST00000384917 97 ntBASIC0.28□□□□□ -2.36
UPK1BO75841 MIR140-201ENST00000385282 100 ntBASIC0.28□□□□□ -2.36
UPK1BO75841 RNU6-131P-201ENST00000391144 107 ntBASIC0.28□□□□□ -2.36
UPK1BO75841 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.28□□□□□ -2.36
UPK1BO75841 MTND1P4-201ENST00000435196 415 ntBASIC0.28□□□□□ -2.36
UPK1BO75841 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
UPK1BO75841 AC105313.1-201ENST00000509121 353 ntBASIC0.28□□□□□ -2.36
UPK1BO75841 MIR4714-201ENST00000580728 77 ntBASIC0.28□□□□□ -2.36
UPK1BO75841 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.27□□□□□ -2.37
UPK1BO75841 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
UPK1BO75841 Y_RNA.9-201ENST00000362354 101 ntBASIC0.27□□□□□ -2.37
UPK1BO75841 Y_RNA.157-201ENST00000363638 102 ntBASIC0.27□□□□□ -2.37
UPK1BO75841 Y_RNA.295-201ENST00000364918 102 ntBASIC0.27□□□□□ -2.37
UPK1BO75841 MIR181A1-201ENST00000385026 110 ntBASIC0.27□□□□□ -2.37
UPK1BO75841 MIR548F5-201ENST00000408421 86 ntBASIC0.27□□□□□ -2.37
UPK1BO75841 RNU6-177P-201ENST00000411257 104 ntBASIC0.27□□□□□ -2.37
UPK1BO75841 MTCO2P27-201ENST00000420740 428 ntBASIC0.27□□□□□ -2.37
UPK1BO75841 RPS3AP52-201ENST00000435639 297 ntBASIC0.27□□□□□ -2.37
UPK1BO75841 HMGN2P32-201ENST00000444648 269 ntBASIC0.27□□□□□ -2.37
UPK1BO75841 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.27□□□□□ -2.37
UPK1BO75841 RNU6-1012P-201ENST00000516606 109 ntBASIC0.27□□□□□ -2.37
UPK1BO75841 AC006380.1-201ENST00000603598 186 ntBASIC0.27□□□□□ -2.37
UPK1BO75841 AC104695.3-201ENST00000604052 296 ntBASIC0.27□□□□□ -2.37
UPK1BO75841 AC005972.2-201ENST00000604690 348 ntBASIC0.27□□□□□ -2.37
UPK1BO75841 AL355073.2-201ENST00000612106 557 ntBASIC0.27□□□□□ -2.37
UPK1BO75841 Y_RNA.194-201ENST00000363985 102 ntBASIC0.26□□□□□ -2.37
UPK1BO75841 SNORD114-22-201ENST00000365423 72 ntBASIC0.26□□□□□ -2.37
UPK1BO75841 Y_RNA.404-201ENST00000383978 102 ntBASIC0.26□□□□□ -2.37
UPK1BO75841 Y_RNA.450-201ENST00000384198 113 ntBASIC0.26□□□□□ -2.37
UPK1BO75841 SNORD116-2-201ENST00000384274 95 ntBASIC0.26□□□□□ -2.37
UPK1BO75841 SNORD116-6-201ENST00000384711 96 ntBASIC0.26□□□□□ -2.37
UPK1BO75841 MIR1276-201ENST00000408707 83 ntBASIC0.26□□□□□ -2.37
UPK1BO75841 RNU6-613P-201ENST00000410412 108 ntBASIC0.26□□□□□ -2.37
UPK1BO75841 RNU2-61P-201ENST00000411069 191 ntBASIC0.26□□□□□ -2.37
UPK1BO75841 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.26□□□□□ -2.37
UPK1BO75841 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 208.7 ms