Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC104629.2-201ENST00000468627 598 ntBASIC-0.66□□□□□ -2.52
USH2AO75445 RNU6-943P-201ENST00000516960 98 ntBASIC-0.66□□□□□ -2.52
USH2AO75445 MTND5P34-201ENST00000568888 325 ntBASIC-0.66□□□□□ -2.52
USH2AO75445 AC244669.1-204ENST00000621564 178 ntBASIC-0.66□□□□□ -2.52
USH2AO75445 SNORD115-13-201ENST00000363358 82 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 SNORA33-201ENST00000363664 130 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 RNU4-92P-201ENST00000363783 136 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 SNORD110-201ENST00000408189 75 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 MIR1257-201ENST00000408490 117 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 AC007919.1-201ENST00000429380 217 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.67□□□□□ -2.52
USH2AO75445 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-0.67□□□□□ -2.52
USH2AO75445 USP9YP12-201ENST00000450481 570 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 AC010531.2-201ENST00000465012 153 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.67□□□□□ -2.52
USH2AO75445 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.67□□□□□ -2.52
USH2AO75445 AL358072.1-201ENST00000604156 575 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 AC012213.4-201ENST00000606457 354 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 snoU2_19.1-201ENST00000362361 80 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 Y_RNA.612-201ENST00000410717 95 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-0.67□□□□□ -2.52
USH2AO75445 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 MTND2P7-201ENST00000521337 640 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 AL359880.1-201ENST00000621879 266 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-0.67□□□□□ -2.52
USH2AO75445 SNORD63.1-201ENST00000516178 80 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 RNU2-34P-201ENST00000516534 121 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 AP001372.4-201ENST00000524889 472 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-0.67□□□□□ -2.52
USH2AO75445 AC022022.2-201ENST00000602989 360 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 MIR181A1-201ENST00000385026 110 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 RNU6-1300P-201ENST00000391046 108 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 AL365338.1-201ENST00000422282 858 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 LARP1BP3-201ENST00000437229 869 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.67□□□□□ -2.52
USH2AO75445 MIR4504-201ENST00000577413 92 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 POLR3GP1-201ENST00000594073 261 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 AL671309.1-201ENST00000603750 544 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 AC104260.1-201ENST00000616660 539 ntBASIC-0.67□□□□□ -2.52
USH2AO75445 RNU6-131P-201ENST00000391144 107 ntBASIC-0.68□□□□□ -2.52
USH2AO75445 RNU7-12P-201ENST00000516030 62 ntBASIC-0.68□□□□□ -2.52
USH2AO75445 AP000753.3-201ENST00000604083 169 ntBASIC-0.68□□□□□ -2.52
USH2AO75445 AL139022.2-201ENST00000606934 443 ntBASIC-0.68□□□□□ -2.52
USH2AO75445 SNORD115-25-201ENST00000362619 82 ntBASIC-0.68□□□□□ -2.52
USH2AO75445 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.68□□□□□ -2.52
USH2AO75445 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-0.68□□□□□ -2.52
USH2AO75445 RNU2-10P-201ENST00000516375 211 ntBASIC-0.68□□□□□ -2.52
USH2AO75445 POLR2KP1-201ENST00000553226 168 ntBASIC-0.68□□□□□ -2.52
USH2AO75445 MIR548AR-201ENST00000582191 57 ntBASIC-0.68□□□□□ -2.52
USH2AO75445 SNORD115-35-201ENST00000365122 82 ntBASIC-0.68□□□□□ -2.52
USH2AO75445 SKA2P1-201ENST00000425592 390 ntBASIC-0.68□□□□□ -2.52
USH2AO75445 VN1R88P-201ENST00000596787 292 ntBASIC-0.68□□□□□ -2.52
USH2AO75445 AL359881.1-201ENST00000602916 267 ntBASIC-0.68□□□□□ -2.52
USH2AO75445 AC022217.4-201ENST00000604389 163 ntBASIC-0.68□□□□□ -2.52
USH2AO75445 AL121655.1-201ENST00000605811 308 ntBASIC-0.68□□□□□ -2.52
USH2AO75445 AC097478.2-201ENST00000610572 514 ntBASIC-0.68□□□□□ -2.52
USH2AO75445 AL049777.1-201ENST00000622740 518 ntBASIC-0.68□□□□□ -2.52
USH2AO75445 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.68□□□□□ -2.52
USH2AO75445 MIR520C-201ENST00000385005 87 ntBASIC-0.68□□□□□ -2.52
USH2AO75445 MTND3P20-201ENST00000407663 186 ntBASIC-0.68□□□□□ -2.52
USH2AO75445 SNORA25.13-201ENST00000516395 103 ntBASIC-0.68□□□□□ -2.52
USH2AO75445 AC090517.1-201ENST00000569307 266 ntBASIC-0.68□□□□□ -2.52
USH2AO75445 MIR548Y-201ENST00000582739 110 ntBASIC-0.68□□□□□ -2.52
USH2AO75445 AC021851.1-201ENST00000608537 1082 ntBASIC-0.68□□□□□ -2.52
USH2AO75445 RNU6-973P-201ENST00000364690 107 ntBASIC-0.69□□□□□ -2.52
USH2AO75445 RNU6-665P-201ENST00000384639 107 ntBASIC-0.69□□□□□ -2.52
USH2AO75445 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC-0.69□□□□□ -2.52
USH2AO75445 RNU7-43P-201ENST00000516554 64 ntBASIC-0.69□□□□□ -2.52
USH2AO75445 MTND2P38-201ENST00000522536 667 ntBASIC-0.69□□□□□ -2.52
USH2AO75445 AL359920.1-201ENST00000618332 176 ntBASIC-0.69□□□□□ -2.52
USH2AO75445 Y_RNA.296-201ENST00000364930 108 ntBASIC-0.69□□□□□ -2.52
USH2AO75445 SNORD14.1-201ENST00000365609 90 ntBASIC-0.69□□□□□ -2.52
USH2AO75445 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.69□□□□□ -2.52
USH2AO75445 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.69□□□□□ -2.52
USH2AO75445 AL353691.2-201ENST00000443795 59 ntBASIC-0.69□□□□□ -2.52
USH2AO75445 RNU7-41P-201ENST00000515917 61 ntBASIC-0.69□□□□□ -2.52
USH2AO75445 RNU6-916P-201ENST00000516088 109 ntBASIC-0.69□□□□□ -2.52
USH2AO75445 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC-0.69□□□□□ -2.52
USH2AO75445 AC009994.1-201ENST00000606889 253 ntBASIC-0.69□□□□□ -2.52
USH2AO75445 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.69□□□□□ -2.52
USH2AO75445 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.69□□□□□ -2.52
USH2AO75445 BX119904.4-201ENST00000424402 301 ntBASIC-0.69□□□□□ -2.52
USH2AO75445 SNRPGP10-201ENST00000432323 225 ntBASIC-0.69□□□□□ -2.52
USH2AO75445 MTCYBP39-201ENST00000437562 491 ntBASIC-0.69□□□□□ -2.52
USH2AO75445 C1DP5-201ENST00000525775 383 ntBASIC-0.69□□□□□ -2.52
USH2AO75445 MIR548W-201ENST00000581970 74 ntBASIC-0.69□□□□□ -2.52
USH2AO75445 SNORD92-201ENST00000585078 85 ntBASIC-0.69□□□□□ -2.52
USH2AO75445 AC069431.2-201ENST00000604149 1099 ntBASIC-0.69□□□□□ -2.52
USH2AO75445 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.69□□□□□ -2.52
USH2AO75445 AC013262.1-201ENST00000426710 252 ntBASIC-0.69□□□□□ -2.52
USH2AO75445 snoU13.10-201ENST00000459301 103 ntBASIC-0.69□□□□□ -2.52
USH2AO75445 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-0.69□□□□□ -2.52
USH2AO75445 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.69□□□□□ -2.52
USH2AO75445 AC110760.3-201ENST00000598794 467 ntBASIC-0.69□□□□□ -2.52
USH2AO75445 AC004067.1-201ENST00000608733 700 ntBASIC-0.69□□□□□ -2.52
USH2AO75445 RNU6-746P-201ENST00000384112 109 ntBASIC-0.7□□□□□ -2.52
USH2AO75445 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.7□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms