Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PRPF40AO75400 TRBV12-1-201ENST00000479785 344 ntBASIC3.06□□□□□ -1.92
PRPF40AO75400 RNU6-1299P-201ENST00000516316 100 ntBASIC3.06□□□□□ -1.92
PRPF40AO75400 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.06□□□□□ -1.92
PRPF40AO75400 AP001485.1-201ENST00000604799 199 ntBASIC3.06□□□□□ -1.92
PRPF40AO75400 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.06□□□□□ -1.92
PRPF40AO75400 U2.22-201ENST00000636441 106 ntBASIC3.06□□□□□ -1.92
PRPF40AO75400 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.06□□□□□ -1.92
PRPF40AO75400 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.06□□□□□ -1.92
PRPF40AO75400 RNU6-199P-201ENST00000362954 107 ntBASIC3.05□□□□□ -1.92
PRPF40AO75400 Y_RNA.215-201ENST00000364204 112 ntBASIC3.05□□□□□ -1.92
PRPF40AO75400 Y_RNA.510-201ENST00000384511 114 ntBASIC3.05□□□□□ -1.92
PRPF40AO75400 SNORD37.2-201ENST00000391075 66 ntBASIC3.05□□□□□ -1.92
PRPF40AO75400 RNU2-55P-201ENST00000411146 174 ntBASIC3.05□□□□□ -1.92
PRPF40AO75400 AC099677.2-201ENST00000436385 175 ntBASIC3.05□□□□□ -1.92
PRPF40AO75400 SNRPGP8-201ENST00000454064 226 ntBASIC3.05□□□□□ -1.92
PRPF40AO75400 SNORD11-201ENST00000459124 84 ntBASIC3.05□□□□□ -1.92
PRPF40AO75400 HMGN1P7-201ENST00000491722 313 ntBASIC3.05□□□□□ -1.92
PRPF40AO75400 RNU2-56P-201ENST00000516826 190 ntBASIC3.05□□□□□ -1.92
PRPF40AO75400 AL358944.1-201ENST00000528537 144 ntBASIC3.05□□□□□ -1.92
PRPF40AO75400 AP002004.2-201ENST00000531656 154 ntBASIC3.05□□□□□ -1.92
PRPF40AO75400 GTF3AP2-201ENST00000557014 266 ntBASIC3.05□□□□□ -1.92
PRPF40AO75400 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.05□□□□□ -1.92
PRPF40AO75400 ELOCP29-201ENST00000588193 334 ntBASIC3.05□□□□□ -1.92
PRPF40AO75400 MIR6852-201ENST00000621699 66 ntBASIC3.05□□□□□ -1.92
PRPF40AO75400 AC012640.5-201ENST00000623897 319 ntBASIC3.05□□□□□ -1.92
PRPF40AO75400 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
PRPF40AO75400 MIR6073-201ENST00000352083 89 ntBASIC3.04□□□□□ -1.92
PRPF40AO75400 RNU6-704P-201ENST00000364162 103 ntBASIC3.04□□□□□ -1.92
PRPF40AO75400 RNU1-112P-201ENST00000364401 164 ntBASIC3.04□□□□□ -1.92
PRPF40AO75400 RNU4-11P-201ENST00000365287 132 ntBASIC3.04□□□□□ -1.92
PRPF40AO75400 RNU11-3P-201ENST00000391111 133 ntBASIC3.04□□□□□ -1.92
PRPF40AO75400 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.04□□□□□ -1.92
PRPF40AO75400 AC069114.2-201ENST00000604699 304 ntBASIC3.04□□□□□ -1.92
PRPF40AO75400 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.04□□□□□ -1.92
PRPF40AO75400 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.04□□□□□ -1.92
PRPF40AO75400 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PRPF40AO75400 Y_RNA.253-201ENST00000364562 112 ntBASIC3.03□□□□□ -1.92
PRPF40AO75400 SNORD50.2-201ENST00000365465 70 ntBASIC3.03□□□□□ -1.92
PRPF40AO75400 SNRPGP10-201ENST00000432323 225 ntBASIC3.03□□□□□ -1.92
PRPF40AO75400 AC087499.2-201ENST00000432861 149 ntBASIC3.03□□□□□ -1.92
PRPF40AO75400 AC105272.1-201ENST00000438604 198 ntBASIC3.03□□□□□ -1.92
PRPF40AO75400 RPS27P1-201ENST00000450552 247 ntBASIC3.03□□□□□ -1.92
PRPF40AO75400 SNORD77.4-201ENST00000516158 81 ntBASIC3.03□□□□□ -1.92
PRPF40AO75400 AC132825.6-201ENST00000638861 357 ntBASIC3.03□□□□□ -1.92
PRPF40AO75400 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
PRPF40AO75400 SNORA19-201ENST00000384737 128 ntBASIC3.02□□□□□ -1.93
PRPF40AO75400 MIR597-201ENST00000384968 97 ntBASIC3.02□□□□□ -1.93
PRPF40AO75400 RNU2-70P-201ENST00000410718 179 ntBASIC3.02□□□□□ -1.93
PRPF40AO75400 HMGN2P35-201ENST00000412164 270 ntBASIC3.02□□□□□ -1.93
PRPF40AO75400 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.02□□□□□ -1.93
PRPF40AO75400 AL049830.1-201ENST00000468034 425 ntBASIC3.02□□□□□ -1.93
PRPF40AO75400 OR9P1P-201ENST00000496431 281 ntBASIC3.02□□□□□ -1.93
PRPF40AO75400 RN7SKP132-201ENST00000516001 208 ntBASIC3.02□□□□□ -1.93
PRPF40AO75400 RNU6-197P-201ENST00000516680 100 ntBASIC3.02□□□□□ -1.93
PRPF40AO75400 Y_RNA.714-201ENST00000517065 90 ntBASIC3.02□□□□□ -1.93
PRPF40AO75400 MIR3658-201ENST00000636291 56 ntBASIC3.02□□□□□ -1.93
PRPF40AO75400 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.01□□□□□ -1.93
PRPF40AO75400 AL157777.2-201ENST00000258070 137 ntBASIC3.01□□□□□ -1.93
PRPF40AO75400 SNORA1B-201ENST00000362535 133 ntBASIC3.01□□□□□ -1.93
PRPF40AO75400 MIR513C-201ENST00000401352 84 ntBASIC3.01□□□□□ -1.93
PRPF40AO75400 AL138827.1-201ENST00000402666 306 ntBASIC3.01□□□□□ -1.93
PRPF40AO75400 RNA5SP356-201ENST00000515972 94 ntBASIC3.01□□□□□ -1.93
PRPF40AO75400 RNU6-126P-201ENST00000516685 103 ntBASIC3.01□□□□□ -1.93
PRPF40AO75400 MIR4662B-201ENST00000579498 81 ntBASIC3.01□□□□□ -1.93
PRPF40AO75400 MIR548X2-201ENST00000579776 100 ntBASIC3.01□□□□□ -1.93
PRPF40AO75400 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.01□□□□□ -1.93
PRPF40AO75400 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.01□□□□□ -1.93
PRPF40AO75400 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PRPF40AO75400 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
PRPF40AO75400 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PRPF40AO75400 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PRPF40AO75400 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PRPF40AO75400 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3□□□□□ -1.93
PRPF40AO75400 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3□□□□□ -1.93
PRPF40AO75400 MIR126-201ENST00000362291 85 ntBASIC3□□□□□ -1.93
PRPF40AO75400 RNU6-484P-201ENST00000384016 107 ntBASIC3□□□□□ -1.93
PRPF40AO75400 Y_RNA.497-201ENST00000384447 98 ntBASIC3□□□□□ -1.93
PRPF40AO75400 SNORA26-201ENST00000391286 122 ntBASIC3□□□□□ -1.93
PRPF40AO75400 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3□□□□□ -1.93
PRPF40AO75400 RNA5SP270-201ENST00000411361 118 ntBASIC3□□□□□ -1.93
PRPF40AO75400 MLLT10P1-201ENST00000418346 262 ntBASIC3□□□□□ -1.93
PRPF40AO75400 RNU7-149P-201ENST00000516739 59 ntBASIC3□□□□□ -1.93
PRPF40AO75400 MIR378D2-201ENST00000580636 98 ntBASIC3□□□□□ -1.93
PRPF40AO75400 AL137847.3-201ENST00000611521 109 ntBASIC3□□□□□ -1.93
PRPF40AO75400 Pinc.1-201ENST00000616452 154 ntBASIC3□□□□□ -1.93
PRPF40AO75400 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3□□□□□ -1.93
PRPF40AO75400 AC022513.1-201ENST00000624512 117 ntBASIC3□□□□□ -1.93
PRPF40AO75400 MIR6844-201ENST00000637122 62 ntBASIC3□□□□□ -1.93
PRPF40AO75400 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
PRPF40AO75400 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
PRPF40AO75400 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.99□□□□□ -1.93
PRPF40AO75400 Y_RNA.393-201ENST00000383936 102 ntBASIC2.99□□□□□ -1.93
PRPF40AO75400 MIR518A2-201ENST00000384966 87 ntBASIC2.99□□□□□ -1.93
PRPF40AO75400 SNORA12.1-201ENST00000390873 148 ntBASIC2.99□□□□□ -1.93
PRPF40AO75400 RNA5SP465-201ENST00000391195 109 ntBASIC2.99□□□□□ -1.93
PRPF40AO75400 RNA5SP21-201ENST00000410917 96 ntBASIC2.99□□□□□ -1.93
PRPF40AO75400 AC245047.3-201ENST00000429428 127 ntBASIC2.99□□□□□ -1.93
PRPF40AO75400 RNA5SP282-201ENST00000516355 108 ntBASIC2.99□□□□□ -1.93
PRPF40AO75400 RNA5SP153-201ENST00000516498 76 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms