Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AL603908.1-201ENST00000406098 201 ntBASIC1.78□□□□□ -2.13
CACNA1FO60840 AL357139.1-201ENST00000407792 426 ntBASIC1.78□□□□□ -2.13
CACNA1FO60840 AC004386.2-201ENST00000441858 148 ntBASIC1.78□□□□□ -2.13
CACNA1FO60840 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.78□□□□□ -2.13
CACNA1FO60840 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.78□□□□□ -2.13
CACNA1FO60840 AC026470.2-201ENST00000561492 181 ntBASIC1.78□□□□□ -2.13
CACNA1FO60840 AC007229.1-201ENST00000590455 412 ntBASIC1.78□□□□□ -2.13
CACNA1FO60840 AC108706.1-201ENST00000611053 297 ntBASIC1.78□□□□□ -2.13
CACNA1FO60840 AC073349.3-201ENST00000617616 186 ntBASIC1.78□□□□□ -2.13
CACNA1FO60840 AL359851.1-201ENST00000569460 4997 ntBASIC1.78□□□□□ -2.13
CACNA1FO60840 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.77□□□□□ -2.13
CACNA1FO60840 RNU6-1305P-201ENST00000364353 104 ntBASIC1.77□□□□□ -2.13
CACNA1FO60840 SNORA25.9-201ENST00000365087 128 ntBASIC1.77□□□□□ -2.13
CACNA1FO60840 RNU6-47P-201ENST00000383866 107 ntBASIC1.77□□□□□ -2.13
CACNA1FO60840 Y_RNA.498-201ENST00000384460 102 ntBASIC1.77□□□□□ -2.13
CACNA1FO60840 Y_RNA.569-201ENST00000384749 103 ntBASIC1.77□□□□□ -2.13
CACNA1FO60840 RNU2-61P-201ENST00000411069 191 ntBASIC1.77□□□□□ -2.13
CACNA1FO60840 MTND2P29-201ENST00000438595 412 ntBASIC1.77□□□□□ -2.13
CACNA1FO60840 SNORA4.4-201ENST00000515921 135 ntBASIC1.77□□□□□ -2.13
CACNA1FO60840 SNORD116-28-201ENST00000516123 91 ntBASIC1.77□□□□□ -2.13
CACNA1FO60840 RNU6-1098P-201ENST00000516772 96 ntBASIC1.77□□□□□ -2.13
CACNA1FO60840 Y_RNA.700-201ENST00000516806 100 ntBASIC1.77□□□□□ -2.13
CACNA1FO60840 AC022559.1-201ENST00000520905 205 ntBASIC1.77□□□□□ -2.13
CACNA1FO60840 MIR4282-201ENST00000583613 67 ntBASIC1.77□□□□□ -2.13
CACNA1FO60840 AC072026.1-201ENST00000605023 201 ntBASIC1.77□□□□□ -2.13
CACNA1FO60840 MIR5739-201ENST00000619803 80 ntBASIC1.77□□□□□ -2.13
CACNA1FO60840 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CACNA1FO60840 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CACNA1FO60840 Y_RNA.361-201ENST00000365515 120 ntBASIC1.76□□□□□ -2.13
CACNA1FO60840 RNU6-662P-201ENST00000384253 104 ntBASIC1.76□□□□□ -2.13
CACNA1FO60840 MIR95-201ENST00000385072 81 ntBASIC1.76□□□□□ -2.13
CACNA1FO60840 RNU6-710P-201ENST00000410424 105 ntBASIC1.76□□□□□ -2.13
CACNA1FO60840 RNA5SP504-201ENST00000410676 117 ntBASIC1.76□□□□□ -2.13
CACNA1FO60840 AC004965.1-201ENST00000413033 213 ntBASIC1.76□□□□□ -2.13
CACNA1FO60840 COX6CP10-201ENST00000416832 224 ntBASIC1.76□□□□□ -2.13
CACNA1FO60840 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.76□□□□□ -2.13
CACNA1FO60840 SUMO1P2-201ENST00000452524 304 ntBASIC1.76□□□□□ -2.13
CACNA1FO60840 AL138752.1-201ENST00000452964 351 ntBASIC1.76□□□□□ -2.13
CACNA1FO60840 AL121594.1-201ENST00000475906 575 ntBASIC1.76□□□□□ -2.13
CACNA1FO60840 AC055872.1-201ENST00000570978 278 ntBASIC1.76□□□□□ -2.13
CACNA1FO60840 AL078604.3-201ENST00000615580 211 ntBASIC1.76□□□□□ -2.13
CACNA1FO60840 snoZ196.1-201ENST00000625269 89 ntBASIC1.76□□□□□ -2.13
CACNA1FO60840 Y_RNA.243-201ENST00000364481 109 ntBASIC1.76□□□□□ -2.13
CACNA1FO60840 RNA5SP363-201ENST00000365072 115 ntBASIC1.76□□□□□ -2.13
CACNA1FO60840 Y_RNA.456-201ENST00000384232 111 ntBASIC1.76□□□□□ -2.13
CACNA1FO60840 MIR489-201ENST00000384923 84 ntBASIC1.76□□□□□ -2.13
CACNA1FO60840 AL512604.1-201ENST00000404812 257 ntBASIC1.76□□□□□ -2.13
CACNA1FO60840 RNU6-1135P-201ENST00000411083 103 ntBASIC1.76□□□□□ -2.13
CACNA1FO60840 AC074198.2-201ENST00000508153 258 ntBASIC1.76□□□□□ -2.13
CACNA1FO60840 RNU6-453P-201ENST00000516819 85 ntBASIC1.76□□□□□ -2.13
CACNA1FO60840 MIR4753-201ENST00000585119 83 ntBASIC1.76□□□□□ -2.13
CACNA1FO60840 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.76□□□□□ -2.13
CACNA1FO60840 AC005562.2-201ENST00000618264 111 ntBASIC1.76□□□□□ -2.13
CACNA1FO60840 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
CACNA1FO60840 SNORD114-7-201ENST00000362520 77 ntBASIC1.75□□□□□ -2.13
CACNA1FO60840 RNU6-326P-201ENST00000365480 107 ntBASIC1.75□□□□□ -2.13
CACNA1FO60840 RNU6-514P-201ENST00000384208 107 ntBASIC1.75□□□□□ -2.13
CACNA1FO60840 AL135790.2-201ENST00000437701 267 ntBASIC1.75□□□□□ -2.13
CACNA1FO60840 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.75□□□□□ -2.13
CACNA1FO60840 AC091959.1-201ENST00000495857 238 ntBASIC1.75□□□□□ -2.13
CACNA1FO60840 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.75□□□□□ -2.13
CACNA1FO60840 CYCSP23-201ENST00000519781 313 ntBASIC1.75□□□□□ -2.13
CACNA1FO60840 MIR7974-201ENST00000615835 79 ntBASIC1.75□□□□□ -2.13
CACNA1FO60840 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.75□□□□□ -2.13
CACNA1FO60840 ZNF209P-201ENST00000593450 2304 ntBASIC1.75□□□□□ -2.13
CACNA1FO60840 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CACNA1FO60840 AC008555.8-201ENST00000623602 2168 ntBASIC1.74□□□□□ -2.13
CACNA1FO60840 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
CACNA1FO60840 Y_RNA.217-201ENST00000364214 105 ntBASIC1.74□□□□□ -2.13
CACNA1FO60840 MIR586-201ENST00000385035 97 ntBASIC1.74□□□□□ -2.13
CACNA1FO60840 RNU6-159P-201ENST00000391080 106 ntBASIC1.74□□□□□ -2.13
CACNA1FO60840 PCNPP3-201ENST00000393579 471 ntBASIC1.74□□□□□ -2.13
CACNA1FO60840 RNU7-120P-201ENST00000459334 63 ntBASIC1.74□□□□□ -2.13
CACNA1FO60840 Y_RNA.641-201ENST00000459414 105 ntBASIC1.74□□□□□ -2.13
CACNA1FO60840 RNU7-57P-201ENST00000459540 60 ntBASIC1.74□□□□□ -2.13
CACNA1FO60840 AC091179.3-201ENST00000474761 144 ntBASIC1.74□□□□□ -2.13
CACNA1FO60840 SNORA81.3-201ENST00000517283 198 ntBASIC1.74□□□□□ -2.13
CACNA1FO60840 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CACNA1FO60840 MRPS18CP4-201ENST00000535821 231 ntBASIC1.74□□□□□ -2.13
CACNA1FO60840 snoU18.1-201ENST00000629629 71 ntBASIC1.74□□□□□ -2.13
CACNA1FO60840 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.74□□□□□ -2.13
CACNA1FO60840 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
CACNA1FO60840 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CACNA1FO60840 Y_RNA.262-201ENST00000364641 102 ntBASIC1.74□□□□□ -2.13
CACNA1FO60840 RNU6-407P-201ENST00000365280 104 ntBASIC1.74□□□□□ -2.13
CACNA1FO60840 RNU6-763P-201ENST00000390865 106 ntBASIC1.74□□□□□ -2.13
CACNA1FO60840 AC074290.1-201ENST00000448883 135 ntBASIC1.74□□□□□ -2.13
CACNA1FO60840 RNU7-141P-201ENST00000459304 62 ntBASIC1.74□□□□□ -2.13
CACNA1FO60840 AC090821.2-201ENST00000523552 176 ntBASIC1.74□□□□□ -2.13
CACNA1FO60840 MIR4423-201ENST00000580922 80 ntBASIC1.74□□□□□ -2.13
CACNA1FO60840 U6.115-201ENST00000636045 103 ntBASIC1.74□□□□□ -2.13
CACNA1FO60840 AP000648.3-201ENST00000623539 4507 ntBASIC1.74□□□□□ -2.13
CACNA1FO60840 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CACNA1FO60840 Y_RNA.7-201ENST00000362352 102 ntBASIC1.73□□□□□ -2.13
CACNA1FO60840 RNU6-486P-201ENST00000363116 107 ntBASIC1.73□□□□□ -2.13
CACNA1FO60840 Y_RNA.341-201ENST00000365341 102 ntBASIC1.73□□□□□ -2.13
CACNA1FO60840 RNU6-1062P-201ENST00000383908 107 ntBASIC1.73□□□□□ -2.13
CACNA1FO60840 SNORA72.4-201ENST00000384174 132 ntBASIC1.73□□□□□ -2.13
CACNA1FO60840 RNU6-997P-201ENST00000384725 107 ntBASIC1.73□□□□□ -2.13
CACNA1FO60840 MIR320A-201ENST00000385302 82 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms