Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 AL162725.1-201ENST00000435405 301 ntBASIC2.14□□□□□ -2.07
SNX2O60749 HSPE1P21-201ENST00000438283 308 ntBASIC2.14□□□□□ -2.07
SNX2O60749 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.14□□□□□ -2.07
SNX2O60749 SNORD2.1-201ENST00000458762 69 ntBASIC2.14□□□□□ -2.07
SNX2O60749 Y_RNA.650-201ENST00000459002 102 ntBASIC2.14□□□□□ -2.07
SNX2O60749 RNU7-141P-201ENST00000459304 62 ntBASIC2.14□□□□□ -2.07
SNX2O60749 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.14□□□□□ -2.07
SNX2O60749 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.14□□□□□ -2.07
SNX2O60749 RNA5SP200-201ENST00000516360 103 ntBASIC2.14□□□□□ -2.07
SNX2O60749 RNU1-142P-201ENST00000516682 145 ntBASIC2.14□□□□□ -2.07
SNX2O60749 Y_RNA.777-201ENST00000516982 102 ntBASIC2.14□□□□□ -2.07
SNX2O60749 MIR4282-201ENST00000583613 67 ntBASIC2.14□□□□□ -2.07
SNX2O60749 Y_RNA.771-201ENST00000598668 102 ntBASIC2.14□□□□□ -2.07
SNX2O60749 AC011921.3-201ENST00000605540 361 ntBASIC2.14□□□□□ -2.07
SNX2O60749 Y_RNA.789-201ENST00000622480 102 ntBASIC2.14□□□□□ -2.07
SNX2O60749 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SNX2O60749 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SNX2O60749 RNU6-376P-201ENST00000384731 106 ntBASIC2.13□□□□□ -2.07
SNX2O60749 SNORA48.3-201ENST00000391081 134 ntBASIC2.13□□□□□ -2.07
SNX2O60749 RNA5SP323-201ENST00000391094 133 ntBASIC2.13□□□□□ -2.07
SNX2O60749 RNA5SP100-201ENST00000410903 110 ntBASIC2.13□□□□□ -2.07
SNX2O60749 RNA5SP59-201ENST00000410922 110 ntBASIC2.13□□□□□ -2.07
SNX2O60749 AC245047.4-201ENST00000433189 144 ntBASIC2.13□□□□□ -2.07
SNX2O60749 AC117454.1-201ENST00000491120 168 ntBASIC2.13□□□□□ -2.07
SNX2O60749 RNU6-1278P-201ENST00000516130 107 ntBASIC2.13□□□□□ -2.07
SNX2O60749 Y_RNA.679-201ENST00000516416 91 ntBASIC2.13□□□□□ -2.07
SNX2O60749 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.13□□□□□ -2.07
SNX2O60749 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.13□□□□□ -2.07
SNX2O60749 SUB1P4-201ENST00000566062 339 ntBASIC2.13□□□□□ -2.07
SNX2O60749 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.13□□□□□ -2.07
SNX2O60749 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.13□□□□□ -2.07
SNX2O60749 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.13□□□□□ -2.07
SNX2O60749 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
SNX2O60749 AL606517.2-201ENST00000442855 241 ntBASIC2.12□□□□□ -2.07
SNX2O60749 RPS4XP11-201ENST00000446897 772 ntBASIC2.12□□□□□ -2.07
SNX2O60749 AC091021.1-201ENST00000468051 388 ntBASIC2.12□□□□□ -2.07
SNX2O60749 RPS26P45-201ENST00000471748 340 ntBASIC2.12□□□□□ -2.07
SNX2O60749 AC084364.2-201ENST00000546924 395 ntBASIC2.12□□□□□ -2.07
SNX2O60749 AC005972.2-201ENST00000604690 348 ntBASIC2.12□□□□□ -2.07
SNX2O60749 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.12□□□□□ -2.07
SNX2O60749 AL078604.3-201ENST00000615580 211 ntBASIC2.12□□□□□ -2.07
SNX2O60749 uc_338.20-201ENST00000621563 178 ntBASIC2.12□□□□□ -2.07
SNX2O60749 AP000553.5-201ENST00000641933 54 ntBASIC2.12□□□□□ -2.07
SNX2O60749 Y_RNA.292-201ENST00000364904 97 ntBASIC2.11□□□□□ -2.07
SNX2O60749 RNU6-1318P-201ENST00000365389 103 ntBASIC2.11□□□□□ -2.07
SNX2O60749 AL023284.1-201ENST00000403956 276 ntBASIC2.11□□□□□ -2.07
SNX2O60749 RPL36AP21-201ENST00000490372 323 ntBASIC2.11□□□□□ -2.07
SNX2O60749 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.11□□□□□ -2.07
SNX2O60749 RNU7-115P-201ENST00000516433 55 ntBASIC2.11□□□□□ -2.07
SNX2O60749 AC024405.2-202ENST00000532731 184 ntBASIC2.11□□□□□ -2.07
SNX2O60749 AC091178.2-201ENST00000584401 117 ntBASIC2.11□□□□□ -2.07
SNX2O60749 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
SNX2O60749 RNY1-201ENST00000364228 113 ntBASIC2.1□□□□□ -2.07
SNX2O60749 RNU6-1323P-201ENST00000384025 107 ntBASIC2.1□□□□□ -2.07
SNX2O60749 MIR515-2-201ENST00000384883 83 ntBASIC2.1□□□□□ -2.07
SNX2O60749 MIR515-1-201ENST00000384884 83 ntBASIC2.1□□□□□ -2.07
SNX2O60749 RNA5SP109-201ENST00000391010 116 ntBASIC2.1□□□□□ -2.07
SNX2O60749 AC010154.1-201ENST00000425857 269 ntBASIC2.1□□□□□ -2.07
SNX2O60749 Y_RNA.638-201ENST00000459374 113 ntBASIC2.1□□□□□ -2.07
SNX2O60749 SCARNA16.3-201ENST00000516595 184 ntBASIC2.1□□□□□ -2.07
SNX2O60749 AC024995.1-201ENST00000523014 93 ntBASIC2.1□□□□□ -2.07
SNX2O60749 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.1□□□□□ -2.07
SNX2O60749 MIR3198-2-201ENST00000577868 80 ntBASIC2.1□□□□□ -2.07
SNX2O60749 AC022217.4-201ENST00000604389 163 ntBASIC2.1□□□□□ -2.07
SNX2O60749 AC069114.2-201ENST00000604699 304 ntBASIC2.1□□□□□ -2.07
SNX2O60749 AL442067.1-201ENST00000613261 223 ntBASIC2.1□□□□□ -2.07
SNX2O60749 AC013791.1-201ENST00000616619 62 ntBASIC2.1□□□□□ -2.07
SNX2O60749 MIR548AY-201ENST00000617669 107 ntBASIC2.1□□□□□ -2.07
SNX2O60749 AC141273.2-201ENST00000618989 130 ntBASIC2.1□□□□□ -2.07
SNX2O60749 MIR6079-201ENST00000635807 62 ntBASIC2.1□□□□□ -2.07
SNX2O60749 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
SNX2O60749 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
SNX2O60749 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.07
SNX2O60749 AC018630.2-201ENST00000534866 2403 ntBASIC2.09□□□□□ -2.07
SNX2O60749 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SNX2O60749 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SNX2O60749 RNU6-661P-201ENST00000362409 107 ntBASIC2.09□□□□□ -2.07
SNX2O60749 RNU4-13P-201ENST00000364019 141 ntBASIC2.09□□□□□ -2.07
SNX2O60749 Y_RNA.257-201ENST00000364596 102 ntBASIC2.09□□□□□ -2.07
SNX2O60749 RNY4P28-201ENST00000365281 93 ntBASIC2.09□□□□□ -2.07
SNX2O60749 Y_RNA.552-201ENST00000384665 112 ntBASIC2.09□□□□□ -2.07
SNX2O60749 AL139156.1-201ENST00000412785 841 ntBASIC2.09□□□□□ -2.07
SNX2O60749 RPS27P1-201ENST00000450552 247 ntBASIC2.09□□□□□ -2.07
SNX2O60749 RNU4-71P-201ENST00000516258 113 ntBASIC2.09□□□□□ -2.07
SNX2O60749 RNU6-1291P-201ENST00000516591 104 ntBASIC2.09□□□□□ -2.07
SNX2O60749 RNU1-40P-201ENST00000516816 164 ntBASIC2.09□□□□□ -2.07
SNX2O60749 RNU1-97P-201ENST00000516872 164 ntBASIC2.09□□□□□ -2.07
SNX2O60749 RNU6-1096P-201ENST00000517089 102 ntBASIC2.09□□□□□ -2.07
SNX2O60749 MIR5692C2-201ENST00000577959 77 ntBASIC2.09□□□□□ -2.07
SNX2O60749 POLR3GP1-201ENST00000594073 261 ntBASIC2.09□□□□□ -2.07
SNX2O60749 AC009779.6-201ENST00000603972 165 ntBASIC2.09□□□□□ -2.07
SNX2O60749 AP003357.1-201ENST00000604497 148 ntBASIC2.09□□□□□ -2.07
SNX2O60749 AC103810.8-201ENST00000607347 118 ntBASIC2.09□□□□□ -2.07
SNX2O60749 AC073349.3-201ENST00000617616 186 ntBASIC2.09□□□□□ -2.07
SNX2O60749 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
SNX2O60749 RNU6-899P-201ENST00000363947 107 ntBASIC2.08□□□□□ -2.08
SNX2O60749 RNU4-10P-201ENST00000364383 140 ntBASIC2.08□□□□□ -2.08
SNX2O60749 RNU6-1019P-201ENST00000364424 107 ntBASIC2.08□□□□□ -2.08
SNX2O60749 snoU13.26-201ENST00000459452 105 ntBASIC2.08□□□□□ -2.08
SNX2O60749 AC025033.1-201ENST00000463883 194 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms