Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
GFRA3O60609 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
GFRA3O60609 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.67□□□□□ -1.82
GFRA3O60609 SNORA26.6-201ENST00000391256 115 ntBASIC3.67□□□□□ -1.82
GFRA3O60609 MIR1253-201ENST00000408273 105 ntBASIC3.67□□□□□ -1.82
GFRA3O60609 RN7SKP167-201ENST00000411047 285 ntBASIC3.67□□□□□ -1.82
GFRA3O60609 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.67□□□□□ -1.82
GFRA3O60609 AC092628.1-201ENST00000436250 252 ntBASIC3.67□□□□□ -1.82
GFRA3O60609 AC025554.1-201ENST00000505641 188 ntBASIC3.67□□□□□ -1.82
GFRA3O60609 MIR3152-201ENST00000579801 74 ntBASIC3.67□□□□□ -1.82
GFRA3O60609 MIR7154-201ENST00000620673 73 ntBASIC3.67□□□□□ -1.82
GFRA3O60609 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.67□□□□□ -1.82
GFRA3O60609 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
GFRA3O60609 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
GFRA3O60609 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
GFRA3O60609 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
GFRA3O60609 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
GFRA3O60609 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
GFRA3O60609 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
GFRA3O60609 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
GFRA3O60609 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
GFRA3O60609 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
GFRA3O60609 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.66□□□□□ -1.82
GFRA3O60609 SNORD77.2-201ENST00000391045 68 ntBASIC3.66□□□□□ -1.82
GFRA3O60609 AL033523.1-201ENST00000605153 153 ntBASIC3.66□□□□□ -1.82
GFRA3O60609 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
GFRA3O60609 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
GFRA3O60609 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
GFRA3O60609 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
GFRA3O60609 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.65□□□□□ -1.82
GFRA3O60609 ICE2P2-201ENST00000483823 2787 ntBASIC3.65□□□□□ -1.82
GFRA3O60609 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.65□□□□□ -1.82
GFRA3O60609 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
GFRA3O60609 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
GFRA3O60609 SNORD115-34-201ENST00000362441 82 ntBASIC3.65□□□□□ -1.83
GFRA3O60609 SNORD115-12-201ENST00000362583 82 ntBASIC3.65□□□□□ -1.83
GFRA3O60609 RNU4-35P-201ENST00000362588 141 ntBASIC3.65□□□□□ -1.83
GFRA3O60609 SNORD115-29-201ENST00000362834 82 ntBASIC3.65□□□□□ -1.83
GFRA3O60609 SNORD115-9-201ENST00000362912 82 ntBASIC3.65□□□□□ -1.83
GFRA3O60609 SNORD115-21-201ENST00000362963 81 ntBASIC3.65□□□□□ -1.83
GFRA3O60609 SNORD115-41-201ENST00000363608 82 ntBASIC3.65□□□□□ -1.83
GFRA3O60609 SNORD115-11-201ENST00000363616 82 ntBASIC3.65□□□□□ -1.83
GFRA3O60609 SNORD115-5-201ENST00000363633 82 ntBASIC3.65□□□□□ -1.83
GFRA3O60609 SNORD115-4-201ENST00000363810 82 ntBASIC3.65□□□□□ -1.83
GFRA3O60609 SNORD115-6-201ENST00000363942 82 ntBASIC3.65□□□□□ -1.83
GFRA3O60609 SNORD115-42-201ENST00000364273 82 ntBASIC3.65□□□□□ -1.83
GFRA3O60609 SNORD115-15-201ENST00000364809 81 ntBASIC3.65□□□□□ -1.83
GFRA3O60609 SNORD115-26-201ENST00000365067 82 ntBASIC3.65□□□□□ -1.83
GFRA3O60609 SNORD115-10-201ENST00000365073 81 ntBASIC3.65□□□□□ -1.83
GFRA3O60609 SNORD115-43-201ENST00000365503 82 ntBASIC3.65□□□□□ -1.83
GFRA3O60609 SNORD115-36-201ENST00000365629 82 ntBASIC3.65□□□□□ -1.83
GFRA3O60609 Y_RNA.443-201ENST00000384135 111 ntBASIC3.65□□□□□ -1.83
GFRA3O60609 SNORA80E-201ENST00000384744 137 ntBASIC3.65□□□□□ -1.83
GFRA3O60609 RNU11-5P-201ENST00000391216 129 ntBASIC3.65□□□□□ -1.83
GFRA3O60609 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.65□□□□□ -1.83
GFRA3O60609 AC090821.2-201ENST00000523552 176 ntBASIC3.65□□□□□ -1.83
GFRA3O60609 MIR4511-201ENST00000582784 87 ntBASIC3.65□□□□□ -1.83
GFRA3O60609 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC3.65□□□□□ -1.83
GFRA3O60609 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
GFRA3O60609 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
GFRA3O60609 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
GFRA3O60609 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
GFRA3O60609 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.64□□□□□ -1.83
GFRA3O60609 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
GFRA3O60609 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.64□□□□□ -1.83
GFRA3O60609 RNA5SP138-201ENST00000365098 114 ntBASIC3.64□□□□□ -1.83
GFRA3O60609 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC3.64□□□□□ -1.83
GFRA3O60609 AL360157.1-201ENST00000565962 87 ntBASIC3.64□□□□□ -1.83
GFRA3O60609 MIR5004-201ENST00000579078 107 ntBASIC3.64□□□□□ -1.83
GFRA3O60609 MIR4769-201ENST00000584126 77 ntBASIC3.64□□□□□ -1.83
GFRA3O60609 AL137790.1-201ENST00000634283 177 ntBASIC3.64□□□□□ -1.83
GFRA3O60609 U6.108-201ENST00000637764 58 ntBASIC3.64□□□□□ -1.83
GFRA3O60609 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
GFRA3O60609 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
GFRA3O60609 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
GFRA3O60609 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
GFRA3O60609 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.64□□□□□ -1.83
GFRA3O60609 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
GFRA3O60609 AC011266.1-201ENST00000624119 3569 ntBASIC3.63□□□□□ -1.83
GFRA3O60609 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.63□□□□□ -1.83
GFRA3O60609 AL356489.2-201ENST00000566968 3528 ntBASIC3.63□□□□□ -1.83
GFRA3O60609 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
GFRA3O60609 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
GFRA3O60609 Y_RNA.264-201ENST00000364665 102 ntBASIC3.63□□□□□ -1.83
GFRA3O60609 HMGN2P34-201ENST00000437647 269 ntBASIC3.63□□□□□ -1.83
GFRA3O60609 SEM1P1-201ENST00000506694 209 ntBASIC3.63□□□□□ -1.83
GFRA3O60609 IGLV3-26-201ENST00000520756 302 ntBASIC3.63□□□□□ -1.83
GFRA3O60609 AP002004.2-201ENST00000531656 154 ntBASIC3.63□□□□□ -1.83
GFRA3O60609 MIR7978-201ENST00000636158 59 ntBASIC3.63□□□□□ -1.83
GFRA3O60609 AC103706.3-201ENST00000636297 85 ntBASIC3.63□□□□□ -1.83
GFRA3O60609 MIR6715B-201ENST00000637172 77 ntBASIC3.63□□□□□ -1.83
GFRA3O60609 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
GFRA3O60609 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
GFRA3O60609 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
GFRA3O60609 AC006504.1-201ENST00000562493 3666 ntBASIC3.63□□□□□ -1.83
GFRA3O60609 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
GFRA3O60609 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
GFRA3O60609 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.62□□□□□ -1.83
GFRA3O60609 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.62□□□□□ -1.83
GFRA3O60609 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms