Protein–RNA interactions for Protein: O43542

XRCC3, DNA repair protein XRCC3, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3O43542 Y_RNA.105-201ENST00000363182 111 ntBASIC1.47□□□□□ -2.17
XRCC3O43542 Y_RNA.152-201ENST00000363578 100 ntBASIC1.47□□□□□ -2.17
XRCC3O43542 RNU6-770P-201ENST00000363929 105 ntBASIC1.47□□□□□ -2.17
XRCC3O43542 Y_RNA.341-201ENST00000365341 102 ntBASIC1.47□□□□□ -2.17
XRCC3O43542 Y_RNA.422-201ENST00000384054 114 ntBASIC1.47□□□□□ -2.17
XRCC3O43542 MIR513A1-201ENST00000385138 129 ntBASIC1.47□□□□□ -2.17
XRCC3O43542 RNU6-121P-201ENST00000410525 99 ntBASIC1.47□□□□□ -2.17
XRCC3O43542 AL445685.2-201ENST00000422551 342 ntBASIC1.47□□□□□ -2.17
XRCC3O43542 POLR2KP2-201ENST00000438155 177 ntBASIC1.47□□□□□ -2.17
XRCC3O43542 AL603825.1-201ENST00000438481 80 ntBASIC1.47□□□□□ -2.17
XRCC3O43542 AL049830.1-201ENST00000468034 425 ntBASIC1.47□□□□□ -2.17
XRCC3O43542 AC108729.3-201ENST00000513484 108 ntBASIC1.47□□□□□ -2.17
XRCC3O43542 SNORA40.15-201ENST00000516884 107 ntBASIC1.47□□□□□ -2.17
XRCC3O43542 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.47□□□□□ -2.17
XRCC3O43542 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
XRCC3O43542 MIR8063-201ENST00000621930 81 ntBASIC1.47□□□□□ -2.17
XRCC3O43542 AC092881.1-201ENST00000638218 2733 ntBASIC1.47□□□□□ -2.17
XRCC3O43542 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
XRCC3O43542 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
XRCC3O43542 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
XRCC3O43542 SNORD33-201ENST00000362761 85 ntBASIC1.46□□□□□ -2.18
XRCC3O43542 Y_RNA.153-201ENST00000363615 91 ntBASIC1.46□□□□□ -2.18
XRCC3O43542 Y_RNA.238-201ENST00000364441 102 ntBASIC1.46□□□□□ -2.18
XRCC3O43542 RNU6-1323P-201ENST00000384025 107 ntBASIC1.46□□□□□ -2.18
XRCC3O43542 Y_RNA.581-201ENST00000391017 97 ntBASIC1.46□□□□□ -2.18
XRCC3O43542 RNA5SP247-201ENST00000411181 105 ntBASIC1.46□□□□□ -2.18
XRCC3O43542 RPL30P13-201ENST00000418873 348 ntBASIC1.46□□□□□ -2.18
XRCC3O43542 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.46□□□□□ -2.18
XRCC3O43542 AC245517.4-201ENST00000448601 281 ntBASIC1.46□□□□□ -2.18
XRCC3O43542 HSPE1P25-201ENST00000455484 251 ntBASIC1.46□□□□□ -2.18
XRCC3O43542 LINC01399-202ENST00000458450 244 ntBASIC1.46□□□□□ -2.18
XRCC3O43542 AC079140.2-201ENST00000506193 142 ntBASIC1.46□□□□□ -2.18
XRCC3O43542 RNU6-1143P-201ENST00000516125 104 ntBASIC1.46□□□□□ -2.18
XRCC3O43542 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.46□□□□□ -2.18
XRCC3O43542 AP003072.1-201ENST00000531740 145 ntBASIC1.46□□□□□ -2.18
XRCC3O43542 AC011604.1-201ENST00000545978 196 ntBASIC1.46□□□□□ -2.18
XRCC3O43542 AL442663.2-201ENST00000554385 511 ntBASIC1.46□□□□□ -2.18
XRCC3O43542 MIR3145-201ENST00000580727 82 ntBASIC1.46□□□□□ -2.18
XRCC3O43542 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.46□□□□□ -2.18
XRCC3O43542 PRR13P7-201ENST00000605538 430 ntBASIC1.46□□□□□ -2.18
XRCC3O43542 AC022140.2-201ENST00000623500 188 ntBASIC1.46□□□□□ -2.18
XRCC3O43542 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
XRCC3O43542 MIR126-201ENST00000362291 85 ntBASIC1.45□□□□□ -2.18
XRCC3O43542 RNU4-90P-201ENST00000362773 141 ntBASIC1.45□□□□□ -2.18
XRCC3O43542 Y_RNA.210-201ENST00000364161 110 ntBASIC1.45□□□□□ -2.18
XRCC3O43542 Y_RNA.326-201ENST00000365176 113 ntBASIC1.45□□□□□ -2.18
XRCC3O43542 SNORA72-201ENST00000384339 132 ntBASIC1.45□□□□□ -2.18
XRCC3O43542 RNU6-424P-201ENST00000384367 105 ntBASIC1.45□□□□□ -2.18
XRCC3O43542 RNU6-102P-201ENST00000384485 104 ntBASIC1.45□□□□□ -2.18
XRCC3O43542 MIR660-201ENST00000385235 97 ntBASIC1.45□□□□□ -2.18
XRCC3O43542 SNORA40.18-201ENST00000391200 128 ntBASIC1.45□□□□□ -2.18
XRCC3O43542 Y_RNA.602-201ENST00000410535 92 ntBASIC1.45□□□□□ -2.18
XRCC3O43542 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.45□□□□□ -2.18
XRCC3O43542 AL135790.2-201ENST00000437701 267 ntBASIC1.45□□□□□ -2.18
XRCC3O43542 AC027119.1-201ENST00000440877 241 ntBASIC1.45□□□□□ -2.18
XRCC3O43542 RPS29P11-201ENST00000496507 171 ntBASIC1.45□□□□□ -2.18
XRCC3O43542 RNA5SP445-201ENST00000515889 115 ntBASIC1.45□□□□□ -2.18
XRCC3O43542 RNA5SP168-201ENST00000516642 112 ntBASIC1.45□□□□□ -2.18
XRCC3O43542 SUMO2P16-201ENST00000519475 264 ntBASIC1.45□□□□□ -2.18
XRCC3O43542 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
XRCC3O43542 Y_RNA.136-201ENST00000363444 102 ntBASIC1.44□□□□□ -2.18
XRCC3O43542 RNU4-41P-201ENST00000364426 143 ntBASIC1.44□□□□□ -2.18
XRCC3O43542 RNU6-1248P-201ENST00000391096 64 ntBASIC1.44□□□□□ -2.18
XRCC3O43542 U8.16-201ENST00000391279 133 ntBASIC1.44□□□□□ -2.18
XRCC3O43542 AL590004.1-201ENST00000405321 300 ntBASIC1.44□□□□□ -2.18
XRCC3O43542 CALM2P4-201ENST00000430810 426 ntBASIC1.44□□□□□ -2.18
XRCC3O43542 Z98949.2-201ENST00000440996 144 ntBASIC1.44□□□□□ -2.18
XRCC3O43542 RNU7-116P-201ENST00000516940 62 ntBASIC1.44□□□□□ -2.18
XRCC3O43542 SNORD3E-202ENST00000627253 216 ntBASIC1.44□□□□□ -2.18
XRCC3O43542 AC068647.2-201ENST00000637380 353 ntBASIC1.44□□□□□ -2.18
XRCC3O43542 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
XRCC3O43542 MIRLET7C-201ENST00000362160 84 ntBASIC1.43□□□□□ -2.18
XRCC3O43542 Y_RNA.19-201ENST00000362462 99 ntBASIC1.43□□□□□ -2.18
XRCC3O43542 RNU1-17P-201ENST00000363022 152 ntBASIC1.43□□□□□ -2.18
XRCC3O43542 RNU4-80P-201ENST00000363200 141 ntBASIC1.43□□□□□ -2.18
XRCC3O43542 RNU6-694P-201ENST00000364071 147 ntBASIC1.43□□□□□ -2.18
XRCC3O43542 RNU6-1080P-201ENST00000383982 107 ntBASIC1.43□□□□□ -2.18
XRCC3O43542 Y_RNA.418-201ENST00000384029 102 ntBASIC1.43□□□□□ -2.18
XRCC3O43542 U8.19-201ENST00000459095 133 ntBASIC1.43□□□□□ -2.18
XRCC3O43542 RNY3P15-201ENST00000516297 97 ntBASIC1.43□□□□□ -2.18
XRCC3O43542 RNU6-902P-201ENST00000517212 91 ntBASIC1.43□□□□□ -2.18
XRCC3O43542 AC136628.3-201ENST00000521868 290 ntBASIC1.43□□□□□ -2.18
XRCC3O43542 AP003357.1-201ENST00000604497 148 ntBASIC1.43□□□□□ -2.18
XRCC3O43542 snoU2_19.2-201ENST00000363024 80 ntBASIC1.42□□□□□ -2.18
XRCC3O43542 RNU6-806P-201ENST00000365147 105 ntBASIC1.42□□□□□ -2.18
XRCC3O43542 RNA5SP259-201ENST00000365541 109 ntBASIC1.42□□□□□ -2.18
XRCC3O43542 Y_RNA.569-201ENST00000384749 103 ntBASIC1.42□□□□□ -2.18
XRCC3O43542 MIR9-3-201ENST00000385084 90 ntBASIC1.42□□□□□ -2.18
XRCC3O43542 Y_RNA.621-201ENST00000411065 96 ntBASIC1.42□□□□□ -2.18
XRCC3O43542 AC003989.2-201ENST00000440224 169 ntBASIC1.42□□□□□ -2.18
XRCC3O43542 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.42□□□□□ -2.18
XRCC3O43542 AC098869.1-201ENST00000481627 292 ntBASIC1.42□□□□□ -2.18
XRCC3O43542 MRPS35P2-201ENST00000508242 191 ntBASIC1.42□□□□□ -2.18
XRCC3O43542 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.42□□□□□ -2.18
XRCC3O43542 RNU6-191P-201ENST00000516295 94 ntBASIC1.42□□□□□ -2.18
XRCC3O43542 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.42□□□□□ -2.18
XRCC3O43542 POLR3GP1-201ENST00000594073 261 ntBASIC1.42□□□□□ -2.18
XRCC3O43542 Y_RNA.4-201ENST00000362333 112 ntBASIC1.41□□□□□ -2.18
XRCC3O43542 SNORA63-201ENST00000363450 132 ntBASIC1.41□□□□□ -2.18
XRCC3O43542 RNU6-290P-201ENST00000365212 101 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms