Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 Y_RNA.771-201ENST00000598668 102 ntBASIC2.15□□□□□ -2.07
PHGDHO43175 AP003357.1-201ENST00000604497 148 ntBASIC2.15□□□□□ -2.07
PHGDHO43175 Y_RNA.789-201ENST00000622480 102 ntBASIC2.15□□□□□ -2.07
PHGDHO43175 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.15□□□□□ -2.07
PHGDHO43175 AP000553.5-201ENST00000641933 54 ntBASIC2.15□□□□□ -2.07
PHGDHO43175 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
PHGDHO43175 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
PHGDHO43175 SNORA72-201ENST00000384339 132 ntBASIC2.14□□□□□ -2.07
PHGDHO43175 MIR17-201ENST00000385012 84 ntBASIC2.14□□□□□ -2.07
PHGDHO43175 RNA5SP212-201ENST00000391223 107 ntBASIC2.14□□□□□ -2.07
PHGDHO43175 AL139156.1-201ENST00000412785 841 ntBASIC2.14□□□□□ -2.07
PHGDHO43175 RPL23AP54-201ENST00000495129 419 ntBASIC2.14□□□□□ -2.07
PHGDHO43175 RNU2-56P-201ENST00000516826 190 ntBASIC2.14□□□□□ -2.07
PHGDHO43175 SNORA31.17-201ENST00000516953 127 ntBASIC2.14□□□□□ -2.07
PHGDHO43175 RNU6-794P-201ENST00000517261 64 ntBASIC2.14□□□□□ -2.07
PHGDHO43175 AC130289.1-201ENST00000577321 73 ntBASIC2.14□□□□□ -2.07
PHGDHO43175 AC013791.1-201ENST00000616619 62 ntBASIC2.14□□□□□ -2.07
PHGDHO43175 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.14□□□□□ -2.07
PHGDHO43175 AC100821.1-201ENST00000523153 2479 ntBASIC2.13□□□□□ -2.07
PHGDHO43175 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
PHGDHO43175 RNY1-201ENST00000364228 113 ntBASIC2.13□□□□□ -2.07
PHGDHO43175 RNY4P28-201ENST00000365281 93 ntBASIC2.13□□□□□ -2.07
PHGDHO43175 RNU4-52P-201ENST00000384209 138 ntBASIC2.13□□□□□ -2.07
PHGDHO43175 RNU6-907P-201ENST00000390924 102 ntBASIC2.13□□□□□ -2.07
PHGDHO43175 RNA5SP508-201ENST00000411327 119 ntBASIC2.13□□□□□ -2.07
PHGDHO43175 Y_RNA.638-201ENST00000459374 113 ntBASIC2.13□□□□□ -2.07
PHGDHO43175 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.13□□□□□ -2.07
PHGDHO43175 AC079804.2-201ENST00000490376 200 ntBASIC2.13□□□□□ -2.07
PHGDHO43175 RNU4-71P-201ENST00000516258 113 ntBASIC2.13□□□□□ -2.07
PHGDHO43175 RNY3P16-201ENST00000516338 101 ntBASIC2.13□□□□□ -2.07
PHGDHO43175 AC127455.1-201ENST00000565496 145 ntBASIC2.13□□□□□ -2.07
PHGDHO43175 MIR5694-201ENST00000581190 76 ntBASIC2.13□□□□□ -2.07
PHGDHO43175 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.13□□□□□ -2.07
PHGDHO43175 AC009779.6-201ENST00000603972 165 ntBASIC2.13□□□□□ -2.07
PHGDHO43175 AL442067.1-201ENST00000613261 223 ntBASIC2.13□□□□□ -2.07
PHGDHO43175 AL773524.1-201ENST00000614065 229 ntBASIC2.13□□□□□ -2.07
PHGDHO43175 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
PHGDHO43175 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
PHGDHO43175 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.12□□□□□ -2.07
PHGDHO43175 RNU6-1205P-201ENST00000363625 106 ntBASIC2.12□□□□□ -2.07
PHGDHO43175 RNU4-10P-201ENST00000364383 140 ntBASIC2.12□□□□□ -2.07
PHGDHO43175 SNORA4.2-201ENST00000365313 147 ntBASIC2.12□□□□□ -2.07
PHGDHO43175 Y_RNA.626-201ENST00000411288 95 ntBASIC2.12□□□□□ -2.07
PHGDHO43175 AC244636.1-201ENST00000421152 228 ntBASIC2.12□□□□□ -2.07
PHGDHO43175 HSPE1P9-201ENST00000440046 311 ntBASIC2.12□□□□□ -2.07
PHGDHO43175 RPL23AP6-201ENST00000446637 472 ntBASIC2.12□□□□□ -2.07
PHGDHO43175 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.12□□□□□ -2.07
PHGDHO43175 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.12□□□□□ -2.07
PHGDHO43175 RNA5SP200-201ENST00000516360 103 ntBASIC2.12□□□□□ -2.07
PHGDHO43175 RNA5SP481-201ENST00000516814 122 ntBASIC2.12□□□□□ -2.07
PHGDHO43175 AP002004.2-201ENST00000531656 154 ntBASIC2.12□□□□□ -2.07
PHGDHO43175 MIR5692C2-201ENST00000577959 77 ntBASIC2.12□□□□□ -2.07
PHGDHO43175 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.12□□□□□ -2.07
PHGDHO43175 MIR8054-201ENST00000620877 86 ntBASIC2.12□□□□□ -2.07
PHGDHO43175 MIR6132-201ENST00000622083 109 ntBASIC2.12□□□□□ -2.07
PHGDHO43175 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.11□□□□□ -2.07
PHGDHO43175 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
PHGDHO43175 AL596028.1-201ENST00000326971 197 ntBASIC2.11□□□□□ -2.07
PHGDHO43175 SNORA1B-201ENST00000362535 133 ntBASIC2.11□□□□□ -2.07
PHGDHO43175 Y_RNA.274-201ENST00000364714 101 ntBASIC2.11□□□□□ -2.07
PHGDHO43175 RNA5SP160-201ENST00000364866 120 ntBASIC2.11□□□□□ -2.07
PHGDHO43175 Y_RNA.293-201ENST00000364908 93 ntBASIC2.11□□□□□ -2.07
PHGDHO43175 RNU6-1080P-201ENST00000383982 107 ntBASIC2.11□□□□□ -2.07
PHGDHO43175 Y_RNA.515-201ENST00000384535 112 ntBASIC2.11□□□□□ -2.07
PHGDHO43175 RNU6-950P-201ENST00000384651 107 ntBASIC2.11□□□□□ -2.07
PHGDHO43175 RNU6-440P-201ENST00000390882 105 ntBASIC2.11□□□□□ -2.07
PHGDHO43175 SNORA36B-201ENST00000410438 131 ntBASIC2.11□□□□□ -2.07
PHGDHO43175 AC009310.1-201ENST00000414414 451 ntBASIC2.11□□□□□ -2.07
PHGDHO43175 RNU6-717P-201ENST00000459076 104 ntBASIC2.11□□□□□ -2.07
PHGDHO43175 RNU6-138P-201ENST00000515952 107 ntBASIC2.11□□□□□ -2.07
PHGDHO43175 SCARNA16.3-201ENST00000516595 184 ntBASIC2.11□□□□□ -2.07
PHGDHO43175 MIR4299-201ENST00000577899 72 ntBASIC2.11□□□□□ -2.07
PHGDHO43175 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.11□□□□□ -2.07
PHGDHO43175 AC073349.3-201ENST00000617616 186 ntBASIC2.11□□□□□ -2.07
PHGDHO43175 AL365265.1-201ENST00000621045 234 ntBASIC2.11□□□□□ -2.07
PHGDHO43175 SNORA48.3-201ENST00000391081 134 ntBASIC2.1□□□□□ -2.07
PHGDHO43175 MIR1298-201ENST00000408783 112 ntBASIC2.1□□□□□ -2.07
PHGDHO43175 RNA5SP338-201ENST00000410495 85 ntBASIC2.1□□□□□ -2.07
PHGDHO43175 RN7SKP200-201ENST00000410564 320 ntBASIC2.1□□□□□ -2.07
PHGDHO43175 RNU6-847P-201ENST00000411115 108 ntBASIC2.1□□□□□ -2.07
PHGDHO43175 COX6CP10-201ENST00000416832 224 ntBASIC2.1□□□□□ -2.07
PHGDHO43175 AL021397.1-201ENST00000451806 248 ntBASIC2.1□□□□□ -2.07
PHGDHO43175 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.1□□□□□ -2.07
PHGDHO43175 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.1□□□□□ -2.07
PHGDHO43175 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.1□□□□□ -2.07
PHGDHO43175 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.1□□□□□ -2.07
PHGDHO43175 AL358944.1-201ENST00000528537 144 ntBASIC2.1□□□□□ -2.07
PHGDHO43175 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.1□□□□□ -2.07
PHGDHO43175 AL929325.1-201ENST00000603096 117 ntBASIC2.1□□□□□ -2.07
PHGDHO43175 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
PHGDHO43175 Y_RNA.199-201ENST00000364014 102 ntBASIC2.09□□□□□ -2.07
PHGDHO43175 Y_RNA.200-201ENST00000364018 102 ntBASIC2.09□□□□□ -2.07
PHGDHO43175 Y_RNA.572-201ENST00000384757 98 ntBASIC2.09□□□□□ -2.07
PHGDHO43175 snoU13.27-201ENST00000459278 104 ntBASIC2.09□□□□□ -2.07
PHGDHO43175 RNU7-34P-201ENST00000459394 64 ntBASIC2.09□□□□□ -2.07
PHGDHO43175 AL049830.1-201ENST00000468034 425 ntBASIC2.09□□□□□ -2.07
PHGDHO43175 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.09□□□□□ -2.07
PHGDHO43175 SNORA31.10-201ENST00000516482 106 ntBASIC2.09□□□□□ -2.07
PHGDHO43175 RNU1-40P-201ENST00000516816 164 ntBASIC2.09□□□□□ -2.07
PHGDHO43175 RNU1-97P-201ENST00000516872 164 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms