Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 U8.19-201ENST00000459095 133 ntBASIC1.97□□□□□ -2.09
NKX2-8O15522 RNU7-141P-201ENST00000459304 62 ntBASIC1.97□□□□□ -2.09
NKX2-8O15522 Y_RNA.637-201ENST00000459424 114 ntBASIC1.97□□□□□ -2.09
NKX2-8O15522 AC117454.1-201ENST00000491120 168 ntBASIC1.97□□□□□ -2.09
NKX2-8O15522 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.97□□□□□ -2.09
NKX2-8O15522 RNU6-1023P-201ENST00000516137 106 ntBASIC1.97□□□□□ -2.09
NKX2-8O15522 RNU6-1291P-201ENST00000516591 104 ntBASIC1.97□□□□□ -2.09
NKX2-8O15522 RNU7-116P-201ENST00000516940 62 ntBASIC1.97□□□□□ -2.09
NKX2-8O15522 AC110588.1-201ENST00000559699 137 ntBASIC1.97□□□□□ -2.09
NKX2-8O15522 AC091178.2-201ENST00000584401 117 ntBASIC1.97□□□□□ -2.09
NKX2-8O15522 AC022217.4-201ENST00000604389 163 ntBASIC1.97□□□□□ -2.09
NKX2-8O15522 AC242852.1-201ENST00000612151 96 ntBASIC1.97□□□□□ -2.09
NKX2-8O15522 MIR548AY-201ENST00000617669 107 ntBASIC1.97□□□□□ -2.09
NKX2-8O15522 AC244015.1-201ENST00000622301 99 ntBASIC1.97□□□□□ -2.09
NKX2-8O15522 snoU18.1-201ENST00000629629 71 ntBASIC1.97□□□□□ -2.09
NKX2-8O15522 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
NKX2-8O15522 AC008555.8-201ENST00000623602 2168 ntBASIC1.97□□□□□ -2.09
NKX2-8O15522 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
NKX2-8O15522 Y_RNA.20-201ENST00000362479 113 ntBASIC1.96□□□□□ -2.1
NKX2-8O15522 RNU1-17P-201ENST00000363022 152 ntBASIC1.96□□□□□ -2.1
NKX2-8O15522 RNU6-899P-201ENST00000363947 107 ntBASIC1.96□□□□□ -2.1
NKX2-8O15522 SNORA63D-201ENST00000364359 132 ntBASIC1.96□□□□□ -2.1
NKX2-8O15522 U8.7-201ENST00000364940 136 ntBASIC1.96□□□□□ -2.1
NKX2-8O15522 Y_RNA.338-201ENST00000365320 114 ntBASIC1.96□□□□□ -2.1
NKX2-8O15522 MT-TG-201ENST00000387429 68 ntBASIC1.96□□□□□ -2.1
NKX2-8O15522 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.96□□□□□ -2.1
NKX2-8O15522 AL355497.1-201ENST00000406262 551 ntBASIC1.96□□□□□ -2.1
NKX2-8O15522 RNA5SP100-201ENST00000410903 110 ntBASIC1.96□□□□□ -2.1
NKX2-8O15522 RNA5SP59-201ENST00000410922 110 ntBASIC1.96□□□□□ -2.1
NKX2-8O15522 Y_RNA.621-201ENST00000411065 96 ntBASIC1.96□□□□□ -2.1
NKX2-8O15522 AC245047.3-201ENST00000429428 127 ntBASIC1.96□□□□□ -2.1
NKX2-8O15522 AL606517.2-201ENST00000442855 241 ntBASIC1.96□□□□□ -2.1
NKX2-8O15522 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.96□□□□□ -2.1
NKX2-8O15522 RNU7-115P-201ENST00000516433 55 ntBASIC1.96□□□□□ -2.1
NKX2-8O15522 RNU6-341P-201ENST00000516973 96 ntBASIC1.96□□□□□ -2.1
NKX2-8O15522 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.96□□□□□ -2.1
NKX2-8O15522 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.96□□□□□ -2.1
NKX2-8O15522 AC024405.2-202ENST00000532731 184 ntBASIC1.96□□□□□ -2.1
NKX2-8O15522 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.96□□□□□ -2.1
NKX2-8O15522 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.96□□□□□ -2.1
NKX2-8O15522 MIR6845-201ENST00000613182 61 ntBASIC1.96□□□□□ -2.1
NKX2-8O15522 Y_RNA.783-201ENST00000613546 102 ntBASIC1.96□□□□□ -2.1
NKX2-8O15522 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.96□□□□□ -2.1
NKX2-8O15522 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.96□□□□□ -2.1
NKX2-8O15522 Y_RNA.65-201ENST00000362846 100 ntBASIC1.95□□□□□ -2.1
NKX2-8O15522 SNORA6-201ENST00000384033 151 ntBASIC1.95□□□□□ -2.1
NKX2-8O15522 RNU6-296P-201ENST00000384608 107 ntBASIC1.95□□□□□ -2.1
NKX2-8O15522 RNU6-651P-201ENST00000411040 105 ntBASIC1.95□□□□□ -2.1
NKX2-8O15522 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.95□□□□□ -2.1
NKX2-8O15522 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.95□□□□□ -2.1
NKX2-8O15522 RPS27P1-201ENST00000450552 247 ntBASIC1.95□□□□□ -2.1
NKX2-8O15522 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.95□□□□□ -2.1
NKX2-8O15522 AC011604.1-201ENST00000545978 196 ntBASIC1.95□□□□□ -2.1
NKX2-8O15522 MIR4643-201ENST00000577473 78 ntBASIC1.95□□□□□ -2.1
NKX2-8O15522 AP003357.1-201ENST00000604497 148 ntBASIC1.95□□□□□ -2.1
NKX2-8O15522 AL008718.3-201ENST00000610217 321 ntBASIC1.95□□□□□ -2.1
NKX2-8O15522 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.95□□□□□ -2.1
NKX2-8O15522 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
NKX2-8O15522 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
NKX2-8O15522 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
NKX2-8O15522 Y_RNA.82-201ENST00000363000 102 ntBASIC1.94□□□□□ -2.1
NKX2-8O15522 Y_RNA.92-201ENST00000363043 102 ntBASIC1.94□□□□□ -2.1
NKX2-8O15522 Y_RNA.164-201ENST00000363709 102 ntBASIC1.94□□□□□ -2.1
NKX2-8O15522 Y_RNA.235-201ENST00000364412 102 ntBASIC1.94□□□□□ -2.1
NKX2-8O15522 Y_RNA.306-201ENST00000365015 102 ntBASIC1.94□□□□□ -2.1
NKX2-8O15522 Y_RNA.312-201ENST00000365089 102 ntBASIC1.94□□□□□ -2.1
NKX2-8O15522 Y_RNA.322-201ENST00000365151 102 ntBASIC1.94□□□□□ -2.1
NKX2-8O15522 RNU6-211P-201ENST00000384047 107 ntBASIC1.94□□□□□ -2.1
NKX2-8O15522 SNORA72-201ENST00000384339 132 ntBASIC1.94□□□□□ -2.1
NKX2-8O15522 Y_RNA.476-201ENST00000384347 108 ntBASIC1.94□□□□□ -2.1
NKX2-8O15522 MIR583-201ENST00000384846 75 ntBASIC1.94□□□□□ -2.1
NKX2-8O15522 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
NKX2-8O15522 RNA5SP212-201ENST00000391223 107 ntBASIC1.94□□□□□ -2.1
NKX2-8O15522 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.94□□□□□ -2.1
NKX2-8O15522 Y_RNA.650-201ENST00000459002 102 ntBASIC1.94□□□□□ -2.1
NKX2-8O15522 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.94□□□□□ -2.1
NKX2-8O15522 RPL23AP54-201ENST00000495129 419 ntBASIC1.94□□□□□ -2.1
NKX2-8O15522 RPL23AP63-201ENST00000498752 471 ntBASIC1.94□□□□□ -2.1
NKX2-8O15522 Y_RNA.777-201ENST00000516982 102 ntBASIC1.94□□□□□ -2.1
NKX2-8O15522 Y_RNA.771-201ENST00000598668 102 ntBASIC1.94□□□□□ -2.1
NKX2-8O15522 AP000942.3-201ENST00000603702 160 ntBASIC1.94□□□□□ -2.1
NKX2-8O15522 AL773524.1-201ENST00000614065 229 ntBASIC1.94□□□□□ -2.1
NKX2-8O15522 AC013791.1-201ENST00000616619 62 ntBASIC1.94□□□□□ -2.1
NKX2-8O15522 Y_RNA.789-201ENST00000622480 102 ntBASIC1.94□□□□□ -2.1
NKX2-8O15522 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.93□□□□□ -2.1
NKX2-8O15522 AC100821.1-201ENST00000523153 2479 ntBASIC1.93□□□□□ -2.1
NKX2-8O15522 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.93□□□□□ -2.1
NKX2-8O15522 Y_RNA.122-201ENST00000363331 96 ntBASIC1.93□□□□□ -2.1
NKX2-8O15522 RNU6-1205P-201ENST00000363625 106 ntBASIC1.93□□□□□ -2.1
NKX2-8O15522 Y_RNA.539-201ENST00000384635 107 ntBASIC1.93□□□□□ -2.1
NKX2-8O15522 MIR17-201ENST00000385012 84 ntBASIC1.93□□□□□ -2.1
NKX2-8O15522 SNORA48.3-201ENST00000391081 134 ntBASIC1.93□□□□□ -2.1
NKX2-8O15522 SNORA40.18-201ENST00000391200 128 ntBASIC1.93□□□□□ -2.1
NKX2-8O15522 AC019129.1-201ENST00000403786 261 ntBASIC1.93□□□□□ -2.1
NKX2-8O15522 SNORA36B-201ENST00000410438 131 ntBASIC1.93□□□□□ -2.1
NKX2-8O15522 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.93□□□□□ -2.1
NKX2-8O15522 RNA5SP481-201ENST00000516814 122 ntBASIC1.93□□□□□ -2.1
NKX2-8O15522 RNU2-56P-201ENST00000516826 190 ntBASIC1.93□□□□□ -2.1
NKX2-8O15522 SNORA31.17-201ENST00000516953 127 ntBASIC1.93□□□□□ -2.1
NKX2-8O15522 RNA5SP437-201ENST00000517249 129 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms