Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 CYCSP49-201ENST00000420810 319 ntBASIC2.69□□□□□ -1.98
SHOXO15266 MTATP6P21-201ENST00000440681 189 ntBASIC2.69□□□□□ -1.98
SHOXO15266 RN7SL297P-201ENST00000483161 293 ntBASIC2.69□□□□□ -1.98
SHOXO15266 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.69□□□□□ -1.98
SHOXO15266 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.69□□□□□ -1.98
SHOXO15266 AC022217.4-201ENST00000604389 163 ntBASIC2.69□□□□□ -1.98
SHOXO15266 uc_338.1-201ENST00000612113 180 ntBASIC2.69□□□□□ -1.98
SHOXO15266 AL162274.2-201ENST00000614406 332 ntBASIC2.69□□□□□ -1.98
SHOXO15266 AC039056.2-201ENST00000622261 511 ntBASIC2.69□□□□□ -1.98
SHOXO15266 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.69□□□□□ -1.98
SHOXO15266 CTSLP2-204ENST00000629029 392 ntBASIC2.69□□□□□ -1.98
SHOXO15266 FO624990.1-201ENST00000636373 85 ntBASIC2.69□□□□□ -1.98
SHOXO15266 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.69□□□□□ -1.98
SHOXO15266 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
SHOXO15266 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.69□□□□□ -1.98
SHOXO15266 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SHOXO15266 RNU6-1336P-201ENST00000383886 109 ntBASIC2.68□□□□□ -1.98
SHOXO15266 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.68□□□□□ -1.98
SHOXO15266 FTH1P12-201ENST00000432137 551 ntBASIC2.68□□□□□ -1.98
SHOXO15266 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.68□□□□□ -1.98
SHOXO15266 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.68□□□□□ -1.98
SHOXO15266 RNU7-28P-201ENST00000516759 62 ntBASIC2.68□□□□□ -1.98
SHOXO15266 IGKV2-26-201ENST00000518305 343 ntBASIC2.68□□□□□ -1.98
SHOXO15266 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.68□□□□□ -1.98
SHOXO15266 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.68□□□□□ -1.98
SHOXO15266 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.68□□□□□ -1.98
SHOXO15266 AC069114.2-201ENST00000604699 304 ntBASIC2.68□□□□□ -1.98
SHOXO15266 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.68□□□□□ -1.98
SHOXO15266 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SHOXO15266 AC080100.1-201ENST00000624239 5356 ntBASIC2.68□□□□□ -1.98
SHOXO15266 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SHOXO15266 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
SHOXO15266 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
SHOXO15266 U8.1-201ENST00000362843 134 ntBASIC2.67□□□□□ -1.98
SHOXO15266 RNA5SP50-201ENST00000363731 107 ntBASIC2.67□□□□□ -1.98
SHOXO15266 RNY1P11-201ENST00000363759 113 ntBASIC2.67□□□□□ -1.98
SHOXO15266 RNA5SP482-201ENST00000391269 118 ntBASIC2.67□□□□□ -1.98
SHOXO15266 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.67□□□□□ -1.98
SHOXO15266 AC245047.3-201ENST00000429428 127 ntBASIC2.67□□□□□ -1.98
SHOXO15266 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.67□□□□□ -1.98
SHOXO15266 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.67□□□□□ -1.98
SHOXO15266 AC069257.2-201ENST00000441819 155 ntBASIC2.67□□□□□ -1.98
SHOXO15266 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.67□□□□□ -1.98
SHOXO15266 RN7SL807P-201ENST00000470923 297 ntBASIC2.67□□□□□ -1.98
SHOXO15266 TRBV12-1-201ENST00000479785 344 ntBASIC2.67□□□□□ -1.98
SHOXO15266 SCGB1D5P-201ENST00000515134 247 ntBASIC2.67□□□□□ -1.98
SHOXO15266 Y_RNA.686-201ENST00000516548 134 ntBASIC2.67□□□□□ -1.98
SHOXO15266 RNA5SP137-201ENST00000516833 135 ntBASIC2.67□□□□□ -1.98
SHOXO15266 RNU1-104P-201ENST00000517280 175 ntBASIC2.67□□□□□ -1.98
SHOXO15266 AC026403.1-201ENST00000518938 295 ntBASIC2.67□□□□□ -1.98
SHOXO15266 AC091544.4-201ENST00000555268 342 ntBASIC2.67□□□□□ -1.98
SHOXO15266 MIR4276-201ENST00000584832 70 ntBASIC2.67□□□□□ -1.98
SHOXO15266 AC012442.3-202ENST00000636742 206 ntBASIC2.67□□□□□ -1.98
SHOXO15266 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
SHOXO15266 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.66□□□□□ -1.98
SHOXO15266 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SHOXO15266 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SHOXO15266 RNU6-888P-201ENST00000363010 101 ntBASIC2.66□□□□□ -1.98
SHOXO15266 SNORD68-201ENST00000363214 84 ntBASIC2.66□□□□□ -1.98
SHOXO15266 MIR522-201ENST00000385071 87 ntBASIC2.66□□□□□ -1.98
SHOXO15266 AL603914.1-201ENST00000401964 204 ntBASIC2.66□□□□□ -1.98
SHOXO15266 RPS29P6-201ENST00000438196 145 ntBASIC2.66□□□□□ -1.98
SHOXO15266 SNRPGP13-201ENST00000442212 177 ntBASIC2.66□□□□□ -1.98
SHOXO15266 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.66□□□□□ -1.98
SHOXO15266 RNU6-659P-201ENST00000516454 104 ntBASIC2.66□□□□□ -1.98
SHOXO15266 RPPH1-2P-201ENST00000516688 293 ntBASIC2.66□□□□□ -1.98
SHOXO15266 SNORA31.15-201ENST00000516771 132 ntBASIC2.66□□□□□ -1.98
SHOXO15266 AC007751.1-201ENST00000529260 376 ntBASIC2.66□□□□□ -1.98
SHOXO15266 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.66□□□□□ -1.98
SHOXO15266 AC010297.1-201ENST00000623948 149 ntBASIC2.66□□□□□ -1.98
SHOXO15266 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
SHOXO15266 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.99
SHOXO15266 SNORD14E-201ENST00000364009 85 ntBASIC2.65□□□□□ -1.99
SHOXO15266 U8.5-201ENST00000364528 136 ntBASIC2.65□□□□□ -1.99
SHOXO15266 Y_RNA.265-201ENST00000364677 108 ntBASIC2.65□□□□□ -1.99
SHOXO15266 snoU2-30.1-201ENST00000365012 70 ntBASIC2.65□□□□□ -1.99
SHOXO15266 Y_RNA.353-201ENST00000365440 108 ntBASIC2.65□□□□□ -1.99
SHOXO15266 RNU6-1292P-201ENST00000383856 107 ntBASIC2.65□□□□□ -1.99
SHOXO15266 RNU6-442P-201ENST00000383968 104 ntBASIC2.65□□□□□ -1.99
SHOXO15266 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SHOXO15266 SNORD72-201ENST00000390994 80 ntBASIC2.65□□□□□ -1.99
SHOXO15266 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.65□□□□□ -1.99
SHOXO15266 AC099677.2-201ENST00000436385 175 ntBASIC2.65□□□□□ -1.99
SHOXO15266 AC107083.1-201ENST00000439643 279 ntBASIC2.65□□□□□ -1.99
SHOXO15266 MIR4762-201ENST00000585261 75 ntBASIC2.65□□□□□ -1.99
SHOXO15266 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.65□□□□□ -1.99
SHOXO15266 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.65□□□□□ -1.99
SHOXO15266 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
SHOXO15266 RNU6-1084P-201ENST00000362498 107 ntBASIC2.64□□□□□ -1.99
SHOXO15266 RNU6-1019P-201ENST00000364424 107 ntBASIC2.64□□□□□ -1.99
SHOXO15266 RNU1-148P-201ENST00000384472 162 ntBASIC2.64□□□□□ -1.99
SHOXO15266 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.64□□□□□ -1.99
SHOXO15266 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.64□□□□□ -1.99
SHOXO15266 Y_RNA.690-201ENST00000516603 95 ntBASIC2.64□□□□□ -1.99
SHOXO15266 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.64□□□□□ -1.99
SHOXO15266 MIR4446-201ENST00000578505 67 ntBASIC2.64□□□□□ -1.99
SHOXO15266 MIR3129-201ENST00000581095 76 ntBASIC2.64□□□□□ -1.99
SHOXO15266 AL049779.4-201ENST00000604500 156 ntBASIC2.64□□□□□ -1.99
SHOXO15266 SNORA28-201ENST00000606769 126 ntBASIC2.64□□□□□ -1.99
SHOXO15266 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 182 ms