Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.38□□□□□ -2.35
LSM1O15116 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
LSM1O15116 RNU6-369P-201ENST00000362515 102 ntBASIC0.37□□□□□ -2.35
LSM1O15116 Y_RNA.41-201ENST00000362646 102 ntBASIC0.37□□□□□ -2.35
LSM1O15116 RNU6-879P-201ENST00000364328 108 ntBASIC0.37□□□□□ -2.35
LSM1O15116 RNU6-613P-201ENST00000410412 108 ntBASIC0.37□□□□□ -2.35
LSM1O15116 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.37□□□□□ -2.35
LSM1O15116 MTND1P4-201ENST00000435196 415 ntBASIC0.37□□□□□ -2.35
LSM1O15116 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.37□□□□□ -2.35
LSM1O15116 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.37□□□□□ -2.35
LSM1O15116 AC105313.1-201ENST00000509121 353 ntBASIC0.37□□□□□ -2.35
LSM1O15116 RNU6-273P-201ENST00000516937 96 ntBASIC0.37□□□□□ -2.35
LSM1O15116 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.37□□□□□ -2.35
LSM1O15116 RNY1P8-201ENST00000383970 114 ntBASIC0.36□□□□□ -2.35
LSM1O15116 RNU6-1310P-201ENST00000384153 107 ntBASIC0.36□□□□□ -2.35
LSM1O15116 AC067940.1-201ENST00000458411 300 ntBASIC0.36□□□□□ -2.35
LSM1O15116 MTND5P5-201ENST00000503764 376 ntBASIC0.36□□□□□ -2.35
LSM1O15116 RNU6-506P-201ENST00000516553 94 ntBASIC0.36□□□□□ -2.35
LSM1O15116 SNORD45.4-201ENST00000516629 73 ntBASIC0.36□□□□□ -2.35
LSM1O15116 MTND2P38-201ENST00000522536 667 ntBASIC0.36□□□□□ -2.35
LSM1O15116 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.36□□□□□ -2.35
LSM1O15116 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
LSM1O15116 RNU1-133P-201ENST00000364867 167 ntBASIC0.35□□□□□ -2.35
LSM1O15116 RNU6-1013P-201ENST00000384180 107 ntBASIC0.35□□□□□ -2.35
LSM1O15116 RNU6-700P-201ENST00000391043 107 ntBASIC0.35□□□□□ -2.35
LSM1O15116 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.35□□□□□ -2.35
LSM1O15116 RNA5SP247-201ENST00000411181 105 ntBASIC0.35□□□□□ -2.35
LSM1O15116 MTCO2P12-201ENST00000427426 682 ntBASIC0.35□□□□□ -2.35
LSM1O15116 RPS29P25-201ENST00000481709 171 ntBASIC0.35□□□□□ -2.35
LSM1O15116 SNORA68.3-201ENST00000515906 83 ntBASIC0.35□□□□□ -2.35
LSM1O15116 AC104695.3-201ENST00000604052 296 ntBASIC0.35□□□□□ -2.35
LSM1O15116 RNU6-1301P-201ENST00000362724 104 ntBASIC0.34□□□□□ -2.36
LSM1O15116 RNY4P14-201ENST00000363656 96 ntBASIC0.34□□□□□ -2.36
LSM1O15116 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.34□□□□□ -2.36
LSM1O15116 Y_RNA.402-201ENST00000383972 102 ntBASIC0.34□□□□□ -2.36
LSM1O15116 MIR1287-201ENST00000408492 90 ntBASIC0.34□□□□□ -2.36
LSM1O15116 MTND4LP16-201ENST00000440828 295 ntBASIC0.34□□□□□ -2.36
LSM1O15116 RNU7-87P-201ENST00000459343 62 ntBASIC0.34□□□□□ -2.36
LSM1O15116 AC116353.2-201ENST00000505332 712 ntBASIC0.34□□□□□ -2.36
LSM1O15116 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.34□□□□□ -2.36
LSM1O15116 AC022616.4-201ENST00000522985 181 ntBASIC0.34□□□□□ -2.36
LSM1O15116 AC055872.1-201ENST00000570978 278 ntBASIC0.34□□□□□ -2.36
LSM1O15116 AC018638.8-201ENST00000588755 281 ntBASIC0.34□□□□□ -2.36
LSM1O15116 AC100810.6-201ENST00000638068 285 ntBASIC0.34□□□□□ -2.36
LSM1O15116 Y_RNA.157-201ENST00000363638 102 ntBASIC0.33□□□□□ -2.36
LSM1O15116 Y_RNA.226-201ENST00000364337 114 ntBASIC0.33□□□□□ -2.36
LSM1O15116 SNORD50B-201ENST00000364995 70 ntBASIC0.33□□□□□ -2.36
LSM1O15116 RNU6-42P-201ENST00000384165 107 ntBASIC0.33□□□□□ -2.36
LSM1O15116 MIR140-201ENST00000385282 100 ntBASIC0.33□□□□□ -2.36
LSM1O15116 RNA5SP118-201ENST00000410385 109 ntBASIC0.33□□□□□ -2.36
LSM1O15116 RNU6-994P-201ENST00000410507 111 ntBASIC0.33□□□□□ -2.36
LSM1O15116 RNA5SP222-201ENST00000411039 105 ntBASIC0.33□□□□□ -2.36
LSM1O15116 Y_RNA.621-201ENST00000411065 96 ntBASIC0.33□□□□□ -2.36
LSM1O15116 RNU2-61P-201ENST00000411069 191 ntBASIC0.33□□□□□ -2.36
LSM1O15116 HMGN2P32-201ENST00000444648 269 ntBASIC0.33□□□□□ -2.36
LSM1O15116 RNU6-329P-201ENST00000459618 107 ntBASIC0.33□□□□□ -2.36
LSM1O15116 AC011352.1-201ENST00000512300 793 ntBASIC0.33□□□□□ -2.36
LSM1O15116 AC243829.6-201ENST00000612652 106 ntBASIC0.33□□□□□ -2.36
LSM1O15116 AC008133.2-201ENST00000624540 351 ntBASIC0.33□□□□□ -2.36
LSM1O15116 MIR4251-201ENST00000635819 61 ntBASIC0.33□□□□□ -2.36
LSM1O15116 MIRLET7D-201ENST00000362263 87 ntBASIC0.32□□□□□ -2.36
LSM1O15116 Y_RNA.168-201ENST00000363740 102 ntBASIC0.32□□□□□ -2.36
LSM1O15116 Y_RNA.172-201ENST00000363765 102 ntBASIC0.32□□□□□ -2.36
LSM1O15116 SNORA36.2-201ENST00000384004 127 ntBASIC0.32□□□□□ -2.36
LSM1O15116 Y_RNA.473-201ENST00000384333 102 ntBASIC0.32□□□□□ -2.36
LSM1O15116 MIR181A1-201ENST00000385026 110 ntBASIC0.32□□□□□ -2.36
LSM1O15116 SNORD12B-201ENST00000410433 91 ntBASIC0.32□□□□□ -2.36
LSM1O15116 AC074085.1-201ENST00000413598 418 ntBASIC0.32□□□□□ -2.36
LSM1O15116 AL390729.2-201ENST00000416137 156 ntBASIC0.32□□□□□ -2.36
LSM1O15116 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.32□□□□□ -2.36
LSM1O15116 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.32□□□□□ -2.36
LSM1O15116 MTATP6P17-201ENST00000431030 672 ntBASIC0.32□□□□□ -2.36
LSM1O15116 AC098826.2-201ENST00000452011 651 ntBASIC0.32□□□□□ -2.36
LSM1O15116 RNU6-496P-201ENST00000516145 99 ntBASIC0.32□□□□□ -2.36
LSM1O15116 AC243829.3-201ENST00000622177 108 ntBASIC0.32□□□□□ -2.36
LSM1O15116 Y_RNA.238-201ENST00000364441 102 ntBASIC0.31□□□□□ -2.36
LSM1O15116 snoU2-30.1-201ENST00000365012 70 ntBASIC0.31□□□□□ -2.36
LSM1O15116 RNU6-342P-201ENST00000384521 104 ntBASIC0.31□□□□□ -2.36
LSM1O15116 SNORD28B-201ENST00000390993 75 ntBASIC0.31□□□□□ -2.36
LSM1O15116 AL031003.1-201ENST00000404229 172 ntBASIC0.31□□□□□ -2.36
LSM1O15116 Y_RNA.594-201ENST00000410373 140 ntBASIC0.31□□□□□ -2.36
LSM1O15116 AC009161.1-201ENST00000417306 376 ntBASIC0.31□□□□□ -2.36
LSM1O15116 AL139396.1-201ENST00000421137 167 ntBASIC0.31□□□□□ -2.36
LSM1O15116 MTND2P22-201ENST00000444325 1033 ntBASIC0.31□□□□□ -2.36
LSM1O15116 Y_RNA.670-201ENST00000516255 105 ntBASIC0.31□□□□□ -2.36
LSM1O15116 RNU6-1016P-201ENST00000516689 94 ntBASIC0.31□□□□□ -2.36
LSM1O15116 AC026407.1-201ENST00000518369 204 ntBASIC0.31□□□□□ -2.36
LSM1O15116 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.31□□□□□ -2.36
LSM1O15116 AL355375.2-201ENST00000574825 175 ntBASIC0.31□□□□□ -2.36
LSM1O15116 MIR4790-201ENST00000577799 79 ntBASIC0.31□□□□□ -2.36
LSM1O15116 AC060780.3-201ENST00000589464 80 ntBASIC0.31□□□□□ -2.36
LSM1O15116 AC004467.1-201ENST00000615678 330 ntBASIC0.31□□□□□ -2.36
LSM1O15116 MIR1-1-201ENST00000362147 71 ntBASIC0.3□□□□□ -2.36
LSM1O15116 Y_RNA.89-201ENST00000363031 102 ntBASIC0.3□□□□□ -2.36
LSM1O15116 Y_RNA.116-201ENST00000363292 103 ntBASIC0.3□□□□□ -2.36
LSM1O15116 RNU6-961P-201ENST00000363893 105 ntBASIC0.3□□□□□ -2.36
LSM1O15116 RNU6-593P-201ENST00000364716 112 ntBASIC0.3□□□□□ -2.36
LSM1O15116 MIR573-201ENST00000384964 99 ntBASIC0.3□□□□□ -2.36
LSM1O15116 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
LSM1O15116 RNA5SP95-201ENST00000410319 137 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms