Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 RNU5A-5P-201ENST00000411054 116 ntBASIC-1.32□□□□□ -2.62
CHD1O14646 MTND4P3-201ENST00000417829 541 ntBASIC-1.32□□□□□ -2.62
CHD1O14646 MTND4P18-201ENST00000447010 465 ntBASIC-1.32□□□□□ -2.62
CHD1O14646 RNU7-62P-201ENST00000458856 62 ntBASIC-1.32□□□□□ -2.62
CHD1O14646 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-1.32□□□□□ -2.62
CHD1O14646 SNORA25.14-201ENST00000516481 132 ntBASIC-1.32□□□□□ -2.62
CHD1O14646 MIR4639-201ENST00000584938 69 ntBASIC-1.32□□□□□ -2.62
CHD1O14646 AC016597.2-201ENST00000613256 341 ntBASIC-1.32□□□□□ -2.62
CHD1O14646 AC084368.1-201ENST00000620935 65 ntBASIC-1.32□□□□□ -2.62
CHD1O14646 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.33□□□□□ -2.62
CHD1O14646 MIR558-201ENST00000384920 94 ntBASIC-1.33□□□□□ -2.62
CHD1O14646 MTCYBP4-201ENST00000401524 249 ntBASIC-1.33□□□□□ -2.62
CHD1O14646 SNORA31.14-201ENST00000516728 116 ntBASIC-1.33□□□□□ -2.62
CHD1O14646 RNU6-881P-201ENST00000516813 102 ntBASIC-1.33□□□□□ -2.62
CHD1O14646 AP003168.1-201ENST00000530091 307 ntBASIC-1.33□□□□□ -2.62
CHD1O14646 AL359999.1-201ENST00000604513 294 ntBASIC-1.33□□□□□ -2.62
CHD1O14646 AC091965.4-201ENST00000607691 587 ntBASIC-1.33□□□□□ -2.62
CHD1O14646 MTND1P7-201ENST00000632801 297 ntBASIC-1.33□□□□□ -2.62
CHD1O14646 AC013437.2-201ENST00000639587 677 ntBASIC-1.33□□□□□ -2.62
CHD1O14646 ZNF299P-201ENST00000406845 1804 ntBASIC-1.34□□□□□ -2.62
CHD1O14646 SNORD38C-201ENST00000384381 69 ntBASIC-1.34□□□□□ -2.62
CHD1O14646 RNU6-274P-201ENST00000459566 107 ntBASIC-1.34□□□□□ -2.62
CHD1O14646 AC005178.1-201ENST00000508392 440 ntBASIC-1.34□□□□□ -2.62
CHD1O14646 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.34□□□□□ -2.62
CHD1O14646 RNA5SP66-201ENST00000517178 101 ntBASIC-1.34□□□□□ -2.62
CHD1O14646 AP001330.5-201ENST00000607176 411 ntBASIC-1.34□□□□□ -2.62
CHD1O14646 AC008873.1-201ENST00000625051 138 ntBASIC-1.34□□□□□ -2.62
CHD1O14646 Y_RNA.576-201ENST00000384781 102 ntBASIC-1.35□□□□□ -2.62
CHD1O14646 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.35□□□□□ -2.62
CHD1O14646 AC107027.2-201ENST00000512197 115 ntBASIC-1.35□□□□□ -2.62
CHD1O14646 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.35□□□□□ -2.62
CHD1O14646 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.35□□□□□ -2.63
CHD1O14646 MIR204-201ENST00000385200 110 ntBASIC-1.35□□□□□ -2.63
CHD1O14646 MTND1P12-201ENST00000455231 147 ntBASIC-1.35□□□□□ -2.63
CHD1O14646 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.35□□□□□ -2.63
CHD1O14646 RNU7-73P-201ENST00000458743 63 ntBASIC-1.35□□□□□ -2.63
CHD1O14646 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-1.35□□□□□ -2.63
CHD1O14646 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-1.35□□□□□ -2.63
CHD1O14646 MIR378D2-201ENST00000580636 98 ntBASIC-1.35□□□□□ -2.63
CHD1O14646 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.35□□□□□ -2.63
CHD1O14646 RNU6-740P-201ENST00000364734 105 ntBASIC-1.36□□□□□ -2.63
CHD1O14646 RNU6-641P-201ENST00000384006 107 ntBASIC-1.36□□□□□ -2.63
CHD1O14646 MIR518F-201ENST00000384973 87 ntBASIC-1.36□□□□□ -2.63
CHD1O14646 MIR1257-201ENST00000408490 117 ntBASIC-1.36□□□□□ -2.63
CHD1O14646 RPL23AP75-201ENST00000491601 451 ntBASIC-1.36□□□□□ -2.63
CHD1O14646 AC091959.1-201ENST00000495857 238 ntBASIC-1.36□□□□□ -2.63
CHD1O14646 RNU6-1178P-201ENST00000516674 107 ntBASIC-1.36□□□□□ -2.63
CHD1O14646 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.36□□□□□ -2.63
CHD1O14646 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.36□□□□□ -2.63
CHD1O14646 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.36□□□□□ -2.63
CHD1O14646 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.37□□□□□ -2.63
CHD1O14646 SNORD114-25-201ENST00000363742 72 ntBASIC-1.37□□□□□ -2.63
CHD1O14646 SNORD87-201ENST00000364849 89 ntBASIC-1.37□□□□□ -2.63
CHD1O14646 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.37□□□□□ -2.63
CHD1O14646 RNU6-468P-201ENST00000384003 109 ntBASIC-1.37□□□□□ -2.63
CHD1O14646 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.37□□□□□ -2.63
CHD1O14646 SNORD28B-201ENST00000390993 75 ntBASIC-1.37□□□□□ -2.63
CHD1O14646 AC006210.1-201ENST00000424882 111 ntBASIC-1.37□□□□□ -2.63
CHD1O14646 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.37□□□□□ -2.63
CHD1O14646 SNORD45.4-201ENST00000516629 73 ntBASIC-1.37□□□□□ -2.63
CHD1O14646 MTND1P35-201ENST00000526739 508 ntBASIC-1.37□□□□□ -2.63
CHD1O14646 MIR4499-201ENST00000584834 69 ntBASIC-1.37□□□□□ -2.63
CHD1O14646 AL139418.1-201ENST00000613613 177 ntBASIC-1.37□□□□□ -2.63
CHD1O14646 AL162376.1-201ENST00000624117 175 ntBASIC-1.37□□□□□ -2.63
CHD1O14646 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.37□□□□□ -2.63
CHD1O14646 RNU6-407P-201ENST00000365280 104 ntBASIC-1.37□□□□□ -2.63
CHD1O14646 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-1.37□□□□□ -2.63
CHD1O14646 RNU6-541P-201ENST00000384709 110 ntBASIC-1.37□□□□□ -2.63
CHD1O14646 MT-TY-201ENST00000387409 66 ntBASIC-1.37□□□□□ -2.63
CHD1O14646 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-1.37□□□□□ -2.63
CHD1O14646 RNU6-685P-201ENST00000517088 95 ntBASIC-1.37□□□□□ -2.63
CHD1O14646 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-1.37□□□□□ -2.63
CHD1O14646 MIR3941-201ENST00000582572 103 ntBASIC-1.37□□□□□ -2.63
CHD1O14646 AC093726.3-201ENST00000637588 150 ntBASIC-1.37□□□□□ -2.63
CHD1O14646 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.38□□□□□ -2.63
CHD1O14646 RNU6-1286P-201ENST00000383871 107 ntBASIC-1.38□□□□□ -2.63
CHD1O14646 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.38□□□□□ -2.63
CHD1O14646 U8.17-201ENST00000391292 132 ntBASIC-1.38□□□□□ -2.63
CHD1O14646 AL117351.1-201ENST00000438864 766 ntBASIC-1.38□□□□□ -2.63
CHD1O14646 MTCO2P3-201ENST00000442543 421 ntBASIC-1.38□□□□□ -2.63
CHD1O14646 RNU6-732P-201ENST00000516033 103 ntBASIC-1.38□□□□□ -2.63
CHD1O14646 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.38□□□□□ -2.63
CHD1O14646 AC009159.2-201ENST00000617603 606 ntBASIC-1.38□□□□□ -2.63
CHD1O14646 AC006927.2-201ENST00000639256 389 ntBASIC-1.38□□□□□ -2.63
CHD1O14646 RNU5B-4P-201ENST00000363508 111 ntBASIC-1.39□□□□□ -2.63
CHD1O14646 RNU4-36P-201ENST00000364294 144 ntBASIC-1.39□□□□□ -2.63
CHD1O14646 RNU6-298P-201ENST00000390888 96 ntBASIC-1.39□□□□□ -2.63
CHD1O14646 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.39□□□□□ -2.63
CHD1O14646 MTND2P30-201ENST00000456663 382 ntBASIC-1.39□□□□□ -2.63
CHD1O14646 AC010587.1-201ENST00000505809 469 ntBASIC-1.39□□□□□ -2.63
CHD1O14646 AC021146.6-201ENST00000514659 117 ntBASIC-1.39□□□□□ -2.63
CHD1O14646 RNU6-1028P-201ENST00000517164 93 ntBASIC-1.39□□□□□ -2.63
CHD1O14646 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.39□□□□□ -2.63
CHD1O14646 RNU6-227P-201ENST00000362865 103 ntBASIC-1.4□□□□□ -2.63
CHD1O14646 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.4□□□□□ -2.63
CHD1O14646 RNU6-609P-201ENST00000365459 107 ntBASIC-1.4□□□□□ -2.63
CHD1O14646 RNU6-434P-201ENST00000384376 107 ntBASIC-1.4□□□□□ -2.63
CHD1O14646 RNY4P36-201ENST00000391116 96 ntBASIC-1.4□□□□□ -2.63
CHD1O14646 HIF1AP1-201ENST00000553642 175 ntBASIC-1.4□□□□□ -2.63
CHD1O14646 MIR4791-201ENST00000607666 84 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms