Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.43□□□□□ -2.18
CDX4O14627 AC069257.2-201ENST00000441819 155 ntBASIC1.43□□□□□ -2.18
CDX4O14627 RPS4XP11-201ENST00000446897 772 ntBASIC1.43□□□□□ -2.18
CDX4O14627 HSPE1P25-201ENST00000455484 251 ntBASIC1.43□□□□□ -2.18
CDX4O14627 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.43□□□□□ -2.18
CDX4O14627 TRBVB-201ENST00000477100 408 ntBASIC1.43□□□□□ -2.18
CDX4O14627 MIR3122-201ENST00000577243 73 ntBASIC1.43□□□□□ -2.18
CDX4O14627 AC024614.2-201ENST00000577584 372 ntBASIC1.43□□□□□ -2.18
CDX4O14627 AC022441.3-201ENST00000605737 136 ntBASIC1.43□□□□□ -2.18
CDX4O14627 AL353149.1-201ENST00000610667 244 ntBASIC1.43□□□□□ -2.18
CDX4O14627 AC006001.4-201ENST00000622243 395 ntBASIC1.43□□□□□ -2.18
CDX4O14627 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.43□□□□□ -2.18
CDX4O14627 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.42□□□□□ -2.18
CDX4O14627 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CDX4O14627 MIR410-201ENST00000362222 80 ntBASIC1.42□□□□□ -2.18
CDX4O14627 RNU6-1266P-201ENST00000362794 105 ntBASIC1.42□□□□□ -2.18
CDX4O14627 SNORD81.1-201ENST00000363064 77 ntBASIC1.42□□□□□ -2.18
CDX4O14627 RNU6-702P-201ENST00000364982 107 ntBASIC1.42□□□□□ -2.18
CDX4O14627 RNU6-21P-201ENST00000384710 107 ntBASIC1.42□□□□□ -2.18
CDX4O14627 MIR1253-201ENST00000408273 105 ntBASIC1.42□□□□□ -2.18
CDX4O14627 MIR1185-2-201ENST00000408687 86 ntBASIC1.42□□□□□ -2.18
CDX4O14627 RPL31P63-201ENST00000422565 375 ntBASIC1.42□□□□□ -2.18
CDX4O14627 SEPT14P8-201ENST00000508026 178 ntBASIC1.42□□□□□ -2.18
CDX4O14627 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.42□□□□□ -2.18
CDX4O14627 AC011406.1-201ENST00000512440 370 ntBASIC1.42□□□□□ -2.18
CDX4O14627 RNVU1-2-201ENST00000516326 135 ntBASIC1.42□□□□□ -2.18
CDX4O14627 RNU6-155P-201ENST00000516347 100 ntBASIC1.42□□□□□ -2.18
CDX4O14627 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.42□□□□□ -2.18
CDX4O14627 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.42□□□□□ -2.18
CDX4O14627 AC022254.1-201ENST00000567857 235 ntBASIC1.42□□□□□ -2.18
CDX4O14627 AP000942.4-201ENST00000604811 241 ntBASIC1.42□□□□□ -2.18
CDX4O14627 SNORD113-5-201ENST00000607261 78 ntBASIC1.42□□□□□ -2.18
CDX4O14627 MIR6078-201ENST00000611069 100 ntBASIC1.42□□□□□ -2.18
CDX4O14627 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
CDX4O14627 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.41□□□□□ -2.18
CDX4O14627 RNU1-96P-201ENST00000364163 162 ntBASIC1.41□□□□□ -2.18
CDX4O14627 RNU1-93P-201ENST00000364704 169 ntBASIC1.41□□□□□ -2.18
CDX4O14627 Y_RNA.354-201ENST00000365448 111 ntBASIC1.41□□□□□ -2.18
CDX4O14627 RNU2-54P-201ENST00000410299 190 ntBASIC1.41□□□□□ -2.18
CDX4O14627 CST2P1-201ENST00000425770 87 ntBASIC1.41□□□□□ -2.18
CDX4O14627 TOMM22P2-201ENST00000430735 237 ntBASIC1.41□□□□□ -2.18
CDX4O14627 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.41□□□□□ -2.18
CDX4O14627 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.41□□□□□ -2.18
CDX4O14627 AC005042.3-201ENST00000453230 174 ntBASIC1.41□□□□□ -2.18
CDX4O14627 Y_RNA.668-201ENST00000516233 93 ntBASIC1.41□□□□□ -2.18
CDX4O14627 RNU6-1041P-201ENST00000516254 102 ntBASIC1.41□□□□□ -2.18
CDX4O14627 SCARNA24.2-201ENST00000516968 130 ntBASIC1.41□□□□□ -2.18
CDX4O14627 SNORA44.1-201ENST00000517031 108 ntBASIC1.41□□□□□ -2.18
CDX4O14627 RNU2-12P-201ENST00000517216 168 ntBASIC1.41□□□□□ -2.18
CDX4O14627 DEFB108E-201ENST00000524692 240 ntBASIC1.41□□□□□ -2.18
CDX4O14627 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.41□□□□□ -2.18
CDX4O14627 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.41□□□□□ -2.18
CDX4O14627 MIR5094-201ENST00000578766 85 ntBASIC1.41□□□□□ -2.18
CDX4O14627 AP001282.2-201ENST00000616149 309 ntBASIC1.41□□□□□ -2.18
CDX4O14627 AC010615.1-201ENST00000594254 1764 ntBASIC1.41□□□□□ -2.18
CDX4O14627 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.4□□□□□ -2.18
CDX4O14627 RNU4-90P-201ENST00000362773 141 ntBASIC1.4□□□□□ -2.19
CDX4O14627 RNU6-1019P-201ENST00000364424 107 ntBASIC1.4□□□□□ -2.19
CDX4O14627 Y_RNA.237-201ENST00000364439 102 ntBASIC1.4□□□□□ -2.19
CDX4O14627 Y_RNA.288-201ENST00000364854 92 ntBASIC1.4□□□□□ -2.19
CDX4O14627 Y_RNA.556-201ENST00000384677 113 ntBASIC1.4□□□□□ -2.19
CDX4O14627 MIR1304-201ENST00000408243 91 ntBASIC1.4□□□□□ -2.19
CDX4O14627 RNU2-38P-201ENST00000410856 79 ntBASIC1.4□□□□□ -2.19
CDX4O14627 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.4□□□□□ -2.19
CDX4O14627 MRPS10P1-201ENST00000448483 130 ntBASIC1.4□□□□□ -2.19
CDX4O14627 SNORD127-201ENST00000458892 86 ntBASIC1.4□□□□□ -2.19
CDX4O14627 RNU6-221P-201ENST00000459541 99 ntBASIC1.4□□□□□ -2.19
CDX4O14627 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.4□□□□□ -2.19
CDX4O14627 RNU6-1338P-201ENST00000516328 91 ntBASIC1.4□□□□□ -2.19
CDX4O14627 AC027419.1-201ENST00000522976 328 ntBASIC1.4□□□□□ -2.19
CDX4O14627 AC004817.2-201ENST00000561794 651 ntBASIC1.4□□□□□ -2.19
CDX4O14627 SUB1P4-201ENST00000566062 339 ntBASIC1.4□□□□□ -2.19
CDX4O14627 MIR3145-201ENST00000580727 82 ntBASIC1.4□□□□□ -2.19
CDX4O14627 AC103810.8-201ENST00000607347 118 ntBASIC1.4□□□□□ -2.19
CDX4O14627 MIR6515-201ENST00000619843 57 ntBASIC1.4□□□□□ -2.19
CDX4O14627 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.4□□□□□ -2.19
CDX4O14627 U6.115-201ENST00000636045 103 ntBASIC1.4□□□□□ -2.19
CDX4O14627 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CDX4O14627 RNU6-862P-201ENST00000362804 105 ntBASIC1.39□□□□□ -2.19
CDX4O14627 snoU2-30.2-201ENST00000362805 70 ntBASIC1.39□□□□□ -2.19
CDX4O14627 RNU6-324P-201ENST00000363957 106 ntBASIC1.39□□□□□ -2.19
CDX4O14627 SNORD115-30-201ENST00000364117 82 ntBASIC1.39□□□□□ -2.19
CDX4O14627 RNU6-1240P-201ENST00000365155 104 ntBASIC1.39□□□□□ -2.19
CDX4O14627 Y_RNA.329-201ENST00000365209 107 ntBASIC1.39□□□□□ -2.19
CDX4O14627 RNU6-290P-201ENST00000365212 101 ntBASIC1.39□□□□□ -2.19
CDX4O14627 Y_RNA.383-201ENST00000383855 97 ntBASIC1.39□□□□□ -2.19
CDX4O14627 Y_RNA.569-201ENST00000384749 103 ntBASIC1.39□□□□□ -2.19
CDX4O14627 MIR520A-201ENST00000384862 85 ntBASIC1.39□□□□□ -2.19
CDX4O14627 AL390729.2-201ENST00000416137 156 ntBASIC1.39□□□□□ -2.19
CDX4O14627 AC060773.1-201ENST00000421698 310 ntBASIC1.39□□□□□ -2.19
CDX4O14627 RNU6-1132P-201ENST00000459214 107 ntBASIC1.39□□□□□ -2.19
CDX4O14627 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.39□□□□□ -2.19
CDX4O14627 RNU6-436P-201ENST00000516171 114 ntBASIC1.39□□□□□ -2.19
CDX4O14627 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.39□□□□□ -2.19
CDX4O14627 AC025647.1-201ENST00000517879 253 ntBASIC1.39□□□□□ -2.19
CDX4O14627 AC023157.2-201ENST00000540596 141 ntBASIC1.39□□□□□ -2.19
CDX4O14627 AC084364.2-201ENST00000546924 395 ntBASIC1.39□□□□□ -2.19
CDX4O14627 AL137100.2-201ENST00000555786 315 ntBASIC1.39□□□□□ -2.19
CDX4O14627 AC006380.1-201ENST00000603598 186 ntBASIC1.39□□□□□ -2.19
CDX4O14627 AC010900.2-201ENST00000604508 210 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 192.2 ms