Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 Y_RNA.576-201ENST00000384781 102 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 MIR873-201ENST00000401120 77 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 RNU6-607P-201ENST00000411283 108 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.34□□□□□ -2.46
CACNA1AO00555 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 AC010424.1-201ENST00000506336 297 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 RNU6-180P-201ENST00000516697 61 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 RNU6-341P-201ENST00000516973 96 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 MIR548AR-201ENST00000582191 57 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 AC087683.1-201ENST00000591187 441 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 AL450270.1-201ENST00000606160 391 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 RNU1-29P-201ENST00000606574 126 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 AC244669.1-204ENST00000621564 178 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 AC019226.2-201ENST00000625973 424 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 SNORA27.1-201ENST00000362604 124 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 SNORA69-201ENST00000383895 132 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 AC092447.3-201ENST00000426027 686 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 MIR18B-201ENST00000454574 71 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 MTATP6P14-201ENST00000455189 673 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.35□□□□□ -2.47
CACNA1AO00555 AC010493.1-201ENST00000513479 292 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 SNORA18.4-201ENST00000516440 124 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 RNU6-685P-201ENST00000517088 95 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 MTND4P33-201ENST00000556706 766 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.35□□□□□ -2.47
CACNA1AO00555 MTND1P8-201ENST00000571424 950 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 AL355375.2-201ENST00000574825 175 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 MIR4639-201ENST00000584938 69 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 AC006380.1-201ENST00000603598 186 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 AC069431.2-201ENST00000604149 1099 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 AC124016.2-201ENST00000610058 665 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 AC016597.2-201ENST00000613256 341 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 MIR6740-201ENST00000618268 113 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 AP002782.1-201ENST00000623107 614 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 RNU5B-4P-201ENST00000363508 111 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 SNORD114-25-201ENST00000363742 72 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 RNU6-312P-201ENST00000364629 107 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 RNU6-723P-201ENST00000383973 107 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 Y_RNA.511-201ENST00000384514 103 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 MIR487A-201ENST00000385009 80 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 RNU6-298P-201ENST00000390888 96 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 MTND1P26-201ENST00000440488 538 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 Z98949.2-201ENST00000440996 144 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 AL158053.1-201ENST00000441503 453 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.35□□□□□ -2.47
CACNA1AO00555 HSPE1P23-201ENST00000509838 286 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 AC097462.1-201ENST00000514125 324 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 RNA5SP470-201ENST00000516463 106 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.35□□□□□ -2.47
CACNA1AO00555 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-0.35□□□□□ -2.47
CACNA1AO00555 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.35□□□□□ -2.47
CACNA1AO00555 MIR4752-201ENST00000579672 72 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-0.35□□□□□ -2.47
CACNA1AO00555 SNORA43.4-201ENST00000629559 138 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 AC091948.2-201ENST00000636510 279 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 AC010332.2-201ENST00000613083 1904 ntBASIC-0.35□□□□□ -2.47
CACNA1AO00555 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-0.36□□□□□ -2.47
CACNA1AO00555 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 U8.6-201ENST00000364939 135 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 RNU6-61P-201ENST00000365528 109 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 MIR522-201ENST00000385071 87 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 MIR563-201ENST00000385080 79 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 MTCO3P19-201ENST00000415864 321 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 AC018865.2-201ENST00000423631 129 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.36□□□□□ -2.47
CACNA1AO00555 AL358934.1-201ENST00000432346 324 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-0.36□□□□□ -2.47
CACNA1AO00555 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.36□□□□□ -2.47
CACNA1AO00555 AC114878.1-201ENST00000441166 358 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.36□□□□□ -2.47
CACNA1AO00555 MTCO2P6-201ENST00000463134 685 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 RNU6-63P-201ENST00000516690 95 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 SNORA18.7-201ENST00000516910 131 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 AC131281.1-201ENST00000522984 164 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 AC068587.5-201ENST00000528506 175 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 AC008608.1-201ENST00000603910 127 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 AL359999.1-201ENST00000604513 294 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 MIR6514-201ENST00000622549 70 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.36□□□□□ -2.47
CACNA1AO00555 SNORD28-201ENST00000384706 75 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 MIR215-201ENST00000384858 110 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 MT-TM-201ENST00000387377 68 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 AL355994.1-201ENST00000424379 260 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.36□□□□□ -2.47
CACNA1AO00555 MTCO2P3-201ENST00000442543 421 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-0.36□□□□□ -2.47
CACNA1AO00555 AC116353.2-201ENST00000505332 712 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 AC018710.1-201ENST00000506509 158 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 RPL39P5-202ENST00000512505 151 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 SNORA25.14-201ENST00000516481 132 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 UBL5P4-201ENST00000562584 236 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 AC131235.4-201ENST00000609288 620 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 AL445584.3-201ENST00000617173 78 ntBASIC-0.36□□□□□ -2.47
CACNA1AO00555 MIR335-201ENST00000362173 94 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.37□□□□□ -2.47
CACNA1AO00555 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms