Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 UBBP3-201ENST00000445497 241 ntBASIC2.69□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.69□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 AC112771.1-201ENST00000463581 102 ntBASIC2.69□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 MIR449C-201ENST00000516047 92 ntBASIC2.69□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 SNORD77.4-201ENST00000516158 81 ntBASIC2.69□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 AC025647.1-201ENST00000517879 253 ntBASIC2.69□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 MIR3129-201ENST00000581095 76 ntBASIC2.69□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 AC015726.2-201ENST00000620112 122 ntBASIC2.69□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 GABRG2-229ENST00000641017 3628 ntBASIC2.69□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 SNORD114-7-201ENST00000362520 77 ntBASIC2.68□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RNU6-1210P-201ENST00000363775 107 ntBASIC2.68□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RNU6-748P-201ENST00000384648 107 ntBASIC2.68□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RPS3AP1-201ENST00000413190 320 ntBASIC2.68□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 AL441985.1-201ENST00000457727 251 ntBASIC2.68□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 snoU13.14-201ENST00000459372 104 ntBASIC2.68□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RPL36AP21-201ENST00000490372 323 ntBASIC2.68□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RN7SKP12-201ENST00000516275 143 ntBASIC2.68□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 AC015720.1-201ENST00000565251 277 ntBASIC2.68□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 AL442128.1-201ENST00000615151 90 ntBASIC2.68□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.68□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.68□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 MIR494-201ENST00000349529 81 ntBASIC2.67□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 MIR449A-201ENST00000362113 91 ntBASIC2.67□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 Y_RNA.203-201ENST00000364106 102 ntBASIC2.67□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 Y_RNA.220-201ENST00000364244 109 ntBASIC2.67□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RNU6-1113P-201ENST00000384348 107 ntBASIC2.67□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 Y_RNA.486-201ENST00000384398 107 ntBASIC2.67□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 MIR590-201ENST00000385008 97 ntBASIC2.67□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 MIR624-201ENST00000385217 97 ntBASIC2.67□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 FO393413.1-201ENST00000402892 195 ntBASIC2.67□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RNU6-57P-201ENST00000411348 103 ntBASIC2.67□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RPS29P6-201ENST00000438196 145 ntBASIC2.67□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 AC016717.1-201ENST00000448918 286 ntBASIC2.67□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 AC010598.1-201ENST00000510378 103 ntBASIC2.67□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RNU7-149P-201ENST00000516739 59 ntBASIC2.67□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RNU6-365P-201ENST00000517113 106 ntBASIC2.67□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 AC007751.1-201ENST00000529260 376 ntBASIC2.67□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 MIR4635-201ENST00000583759 79 ntBASIC2.67□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.67□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 AC097639.2-201ENST00000603159 172 ntBASIC2.67□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 Y_RNA.366-201ENST00000365540 102 ntBASIC2.66□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 SNORD21-201ENST00000383953 95 ntBASIC2.66□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 SNORA1-201ENST00000384107 130 ntBASIC2.66□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 Y_RNA.544-201ENST00000384650 113 ntBASIC2.66□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 SNORA19.1-201ENST00000410656 129 ntBASIC2.66□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 AC007064.1-201ENST00000412238 351 ntBASIC2.66□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RNU6-1146P-201ENST00000516282 102 ntBASIC2.66□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RNA5SP282-201ENST00000516355 108 ntBASIC2.66□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.66□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.66□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.66□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 AL159152.1-201ENST00000635019 2587 ntBASIC2.66□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 AL589743.1-201ENST00000551932 2712 ntBASIC2.65□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 AC026241.1-201ENST00000517873 2142 ntBASIC2.65□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 Y_RNA.49-201ENST00000362714 112 ntBASIC2.65□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6-1209P-201ENST00000363655 107 ntBASIC2.65□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MIR29B2-201ENST00000385055 81 ntBASIC2.65□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 SNORA26-201ENST00000391286 122 ntBASIC2.65□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MIR1283-1-201ENST00000408494 87 ntBASIC2.65□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNA5SP136-201ENST00000410906 107 ntBASIC2.65□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.65□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.65□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AC109327.2-201ENST00000448339 378 ntBASIC2.65□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU7-14P-201ENST00000459331 62 ntBASIC2.65□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MIR4753-201ENST00000585119 83 ntBASIC2.65□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6-91P-201ENST00000607774 107 ntBASIC2.65□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.65□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MIR6817-201ENST00000615588 66 ntBASIC2.65□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AL137067.1-201ENST00000615933 120 ntBASIC2.65□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.65□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.65□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.65□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNA5SP68-201ENST00000363885 119 ntBASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU1-57P-201ENST00000384491 166 ntBASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MIR181B1-201ENST00000385240 110 ntBASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNA5SP354-201ENST00000391247 136 ntBASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AL513477.1-202ENST00000417061 214 ntBASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AC010099.1-201ENST00000455434 375 ntBASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 SNORD11-201ENST00000459124 84 ntBASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RPS27P22-201ENST00000478056 241 ntBASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 OR9P1P-201ENST00000496431 281 ntBASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 ATP5EP1-201ENST00000510257 156 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 225.8 ms