Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.22□□□□□ -2.37
RBFOX3A6NFN3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.22□□□□□ -2.37
RBFOX3A6NFN3 MIR573-201ENST00000384964 99 ntBASIC0.21□□□□□ -2.38
RBFOX3A6NFN3 MIR522-201ENST00000385071 87 ntBASIC0.21□□□□□ -2.38
RBFOX3A6NFN3 RNU6-780P-201ENST00000391030 104 ntBASIC0.21□□□□□ -2.38
RBFOX3A6NFN3 MIR190B-201ENST00000401119 79 ntBASIC0.21□□□□□ -2.38
RBFOX3A6NFN3 RNA5SP475-201ENST00000410568 110 ntBASIC0.21□□□□□ -2.38
RBFOX3A6NFN3 Y_RNA.621-201ENST00000411065 96 ntBASIC0.21□□□□□ -2.38
RBFOX3A6NFN3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.21□□□□□ -2.38
RBFOX3A6NFN3 HMGN2P32-201ENST00000444648 269 ntBASIC0.21□□□□□ -2.38
RBFOX3A6NFN3 UBE2V1P7-201ENST00000446395 340 ntBASIC0.21□□□□□ -2.38
RBFOX3A6NFN3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.21□□□□□ -2.38
RBFOX3A6NFN3 AC105313.1-201ENST00000509121 353 ntBASIC0.21□□□□□ -2.38
RBFOX3A6NFN3 Y_RNA.670-201ENST00000516255 105 ntBASIC0.21□□□□□ -2.38
RBFOX3A6NFN3 MTND2P38-201ENST00000522536 667 ntBASIC0.21□□□□□ -2.38
RBFOX3A6NFN3 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.21□□□□□ -2.38
RBFOX3A6NFN3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.21□□□□□ -2.38
RBFOX3A6NFN3 MIR4300-201ENST00000581016 96 ntBASIC0.21□□□□□ -2.38
RBFOX3A6NFN3 MIR3611-201ENST00000584484 83 ntBASIC0.21□□□□□ -2.38
RBFOX3A6NFN3 RN7SKP299-201ENST00000606679 301 ntBASIC0.21□□□□□ -2.38
RBFOX3A6NFN3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.21□□□□□ -2.38
RBFOX3A6NFN3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.2□□□□□ -2.38
RBFOX3A6NFN3 Y_RNA.168-201ENST00000363740 102 ntBASIC0.2□□□□□ -2.38
RBFOX3A6NFN3 RNU6-1327P-201ENST00000365302 105 ntBASIC0.2□□□□□ -2.38
RBFOX3A6NFN3 RNU4-45P-201ENST00000365469 141 ntBASIC0.2□□□□□ -2.38
RBFOX3A6NFN3 Y_RNA.370-201ENST00000365589 108 ntBASIC0.2□□□□□ -2.38
RBFOX3A6NFN3 RNU6-842P-201ENST00000384269 107 ntBASIC0.2□□□□□ -2.38
RBFOX3A6NFN3 SNORA2B-201ENST00000384583 137 ntBASIC0.2□□□□□ -2.38
RBFOX3A6NFN3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.2□□□□□ -2.38
RBFOX3A6NFN3 SNORD5.1-201ENST00000458800 75 ntBASIC0.2□□□□□ -2.38
RBFOX3A6NFN3 AC108740.1-201ENST00000498629 225 ntBASIC0.2□□□□□ -2.38
RBFOX3A6NFN3 MIR1273G-201ENST00000577677 100 ntBASIC0.2□□□□□ -2.38
RBFOX3A6NFN3 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
RBFOX3A6NFN3 MIR3942-201ENST00000585264 109 ntBASIC0.2□□□□□ -2.38
RBFOX3A6NFN3 AL355073.2-201ENST00000612106 557 ntBASIC0.2□□□□□ -2.38
RBFOX3A6NFN3 AC008133.2-201ENST00000624540 351 ntBASIC0.2□□□□□ -2.38
RBFOX3A6NFN3 MIR4251-201ENST00000635819 61 ntBASIC0.2□□□□□ -2.38
RBFOX3A6NFN3 SNORD114-26-201ENST00000363543 72 ntBASIC0.19□□□□□ -2.38
RBFOX3A6NFN3 RNU6-1059P-201ENST00000363752 98 ntBASIC0.19□□□□□ -2.38
RBFOX3A6NFN3 Y_RNA.253-201ENST00000364562 112 ntBASIC0.19□□□□□ -2.38
RBFOX3A6NFN3 RNU6-1310P-201ENST00000384153 107 ntBASIC0.19□□□□□ -2.38
RBFOX3A6NFN3 Y_RNA.466-201ENST00000384294 113 ntBASIC0.19□□□□□ -2.38
RBFOX3A6NFN3 RNU6-332P-201ENST00000391193 108 ntBASIC0.19□□□□□ -2.38
RBFOX3A6NFN3 USP9YP30-201ENST00000430729 455 ntBASIC0.19□□□□□ -2.38
RBFOX3A6NFN3 AC005534.2-201ENST00000431047 433 ntBASIC0.19□□□□□ -2.38
RBFOX3A6NFN3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.19□□□□□ -2.38
RBFOX3A6NFN3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.19□□□□□ -2.38
RBFOX3A6NFN3 SNORA40.9-201ENST00000515895 93 ntBASIC0.19□□□□□ -2.38
RBFOX3A6NFN3 RNU6-864P-201ENST00000516256 108 ntBASIC0.19□□□□□ -2.38
RBFOX3A6NFN3 RNU6-1337P-201ENST00000516525 95 ntBASIC0.19□□□□□ -2.38
RBFOX3A6NFN3 SNORD45.4-201ENST00000516629 73 ntBASIC0.19□□□□□ -2.38
RBFOX3A6NFN3 MIR2115-201ENST00000516657 100 ntBASIC0.19□□□□□ -2.38
RBFOX3A6NFN3 Y_RNA.704-201ENST00000516851 102 ntBASIC0.19□□□□□ -2.38
RBFOX3A6NFN3 AC022616.4-201ENST00000522985 181 ntBASIC0.19□□□□□ -2.38
RBFOX3A6NFN3 AC091925.1-201ENST00000623204 462 ntBASIC0.19□□□□□ -2.38
RBFOX3A6NFN3 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.19□□□□□ -2.38
RBFOX3A6NFN3 RNU6-369P-201ENST00000362515 102 ntBASIC0.18□□□□□ -2.38
RBFOX3A6NFN3 SNORD115-30-201ENST00000364117 82 ntBASIC0.18□□□□□ -2.38
RBFOX3A6NFN3 RNU6-879P-201ENST00000364328 108 ntBASIC0.18□□□□□ -2.38
RBFOX3A6NFN3 snoU2-30.1-201ENST00000365012 70 ntBASIC0.18□□□□□ -2.38
RBFOX3A6NFN3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.18□□□□□ -2.38
RBFOX3A6NFN3 AC010486.3-201ENST00000511602 785 ntBASIC0.18□□□□□ -2.38
RBFOX3A6NFN3 SNORA62.5-201ENST00000516634 120 ntBASIC0.18□□□□□ -2.38
RBFOX3A6NFN3 RNU1-54P-201ENST00000517181 120 ntBASIC0.18□□□□□ -2.38
RBFOX3A6NFN3 RNU2-12P-201ENST00000517216 168 ntBASIC0.18□□□□□ -2.38
RBFOX3A6NFN3 AC105029.1-201ENST00000520250 669 ntBASIC0.18□□□□□ -2.38
RBFOX3A6NFN3 AC245008.1-201ENST00000608123 476 ntBASIC0.18□□□□□ -2.38
RBFOX3A6NFN3 Z99129.1-201ENST00000612510 255 ntBASIC0.18□□□□□ -2.38
RBFOX3A6NFN3 MIR1321-201ENST00000637766 79 ntBASIC0.18□□□□□ -2.38
RBFOX3A6NFN3 RNY1P16-201ENST00000363063 111 ntBASIC0.17□□□□□ -2.38
RBFOX3A6NFN3 Y_RNA.205-201ENST00000364128 113 ntBASIC0.17□□□□□ -2.38
RBFOX3A6NFN3 Y_RNA.557-201ENST00000384680 107 ntBASIC0.17□□□□□ -2.38
RBFOX3A6NFN3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.17□□□□□ -2.38
RBFOX3A6NFN3 MTND1P17-201ENST00000448961 204 ntBASIC0.17□□□□□ -2.38
RBFOX3A6NFN3 U8.19-201ENST00000459095 133 ntBASIC0.17□□□□□ -2.38
RBFOX3A6NFN3 U8.22-201ENST00000459141 133 ntBASIC0.17□□□□□ -2.38
RBFOX3A6NFN3 AC116353.2-201ENST00000505332 712 ntBASIC0.17□□□□□ -2.38
RBFOX3A6NFN3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
RBFOX3A6NFN3 AC015726.2-201ENST00000620112 122 ntBASIC0.17□□□□□ -2.38
RBFOX3A6NFN3 RNU6-1084P-201ENST00000362498 107 ntBASIC0.16□□□□□ -2.38
RBFOX3A6NFN3 Y_RNA.38-201ENST00000362617 102 ntBASIC0.16□□□□□ -2.38
RBFOX3A6NFN3 Y_RNA.48-201ENST00000362710 103 ntBASIC0.16□□□□□ -2.38
RBFOX3A6NFN3 RNU6-318P-201ENST00000384283 103 ntBASIC0.16□□□□□ -2.38
RBFOX3A6NFN3 RNU6-700P-201ENST00000391043 107 ntBASIC0.16□□□□□ -2.38
RBFOX3A6NFN3 RNA5SP95-201ENST00000410319 137 ntBASIC0.16□□□□□ -2.38
RBFOX3A6NFN3 AL390729.2-201ENST00000416137 156 ntBASIC0.16□□□□□ -2.38
RBFOX3A6NFN3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.16□□□□□ -2.38
RBFOX3A6NFN3 MTND1P26-201ENST00000440488 538 ntBASIC0.16□□□□□ -2.38
RBFOX3A6NFN3 MTCO3P10-201ENST00000455912 772 ntBASIC0.16□□□□□ -2.38
RBFOX3A6NFN3 SNORA25.10-201ENST00000515926 124 ntBASIC0.16□□□□□ -2.38
RBFOX3A6NFN3 AL355375.2-201ENST00000574825 175 ntBASIC0.16□□□□□ -2.38
RBFOX3A6NFN3 MIR4514-201ENST00000581410 57 ntBASIC0.16□□□□□ -2.38
RBFOX3A6NFN3 AC063944.3-201ENST00000609969 533 ntBASIC0.16□□□□□ -2.38
RBFOX3A6NFN3 MIR924-201ENST00000638017 53 ntBASIC0.16□□□□□ -2.38
RBFOX3A6NFN3 MIR377-201ENST00000362145 69 ntBASIC0.15□□□□□ -2.39
RBFOX3A6NFN3 MIR18A-201ENST00000362310 71 ntBASIC0.15□□□□□ -2.39
RBFOX3A6NFN3 RNU6-874P-201ENST00000362390 105 ntBASIC0.15□□□□□ -2.39
RBFOX3A6NFN3 RNU2-70P-201ENST00000410718 179 ntBASIC0.15□□□□□ -2.39
RBFOX3A6NFN3 RNU6-373P-201ENST00000411247 98 ntBASIC0.15□□□□□ -2.39
RBFOX3A6NFN3 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms