Protein–RNA interactions for Protein: A6NFE2

SMCO2, Single-pass membrane and coiled-coil domain-containing protein 2, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2A6NFE2 RNU6-1310P-201ENST00000384153 107 ntBASIC0.5□□□□□ -2.33
SMCO2A6NFE2 RNU6-700P-201ENST00000391043 107 ntBASIC0.5□□□□□ -2.33
SMCO2A6NFE2 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.5□□□□□ -2.33
SMCO2A6NFE2 RPS20P10-201ENST00000451209 253 ntBASIC0.5□□□□□ -2.33
SMCO2A6NFE2 RNA5SP121-201ENST00000516537 101 ntBASIC0.5□□□□□ -2.33
SMCO2A6NFE2 RNU6-273P-201ENST00000516937 96 ntBASIC0.5□□□□□ -2.33
SMCO2A6NFE2 AC036111.3-201ENST00000526389 112 ntBASIC0.5□□□□□ -2.33
SMCO2A6NFE2 MIR4711-201ENST00000578274 70 ntBASIC0.5□□□□□ -2.33
SMCO2A6NFE2 AC009229.3-201ENST00000608056 282 ntBASIC0.5□□□□□ -2.33
SMCO2A6NFE2 AC103591.3-201ENST00000608684 209 ntBASIC0.5□□□□□ -2.33
SMCO2A6NFE2 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.5□□□□□ -2.33
SMCO2A6NFE2 7SK.10-201ENST00000621414 298 ntBASIC0.5□□□□□ -2.33
SMCO2A6NFE2 AC243829.3-201ENST00000622177 108 ntBASIC0.5□□□□□ -2.33
SMCO2A6NFE2 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.5□□□□□ -2.33
SMCO2A6NFE2 SNORD68-201ENST00000363214 84 ntBASIC0.49□□□□□ -2.33
SMCO2A6NFE2 RNU6-879P-201ENST00000364328 108 ntBASIC0.49□□□□□ -2.33
SMCO2A6NFE2 RNU4-24P-201ENST00000364565 139 ntBASIC0.49□□□□□ -2.33
SMCO2A6NFE2 Y_RNA.450-201ENST00000384198 113 ntBASIC0.49□□□□□ -2.33
SMCO2A6NFE2 RNU6-1297P-201ENST00000384415 104 ntBASIC0.49□□□□□ -2.33
SMCO2A6NFE2 Y_RNA.517-201ENST00000384551 106 ntBASIC0.49□□□□□ -2.33
SMCO2A6NFE2 MIR520C-201ENST00000385005 87 ntBASIC0.49□□□□□ -2.33
SMCO2A6NFE2 MIR522-201ENST00000385071 87 ntBASIC0.49□□□□□ -2.33
SMCO2A6NFE2 MIR136-201ENST00000385207 82 ntBASIC0.49□□□□□ -2.33
SMCO2A6NFE2 MIR1302-7-201ENST00000408841 72 ntBASIC0.49□□□□□ -2.33
SMCO2A6NFE2 AC074085.1-201ENST00000413598 418 ntBASIC0.49□□□□□ -2.33
SMCO2A6NFE2 AL139396.1-201ENST00000421137 167 ntBASIC0.49□□□□□ -2.33
SMCO2A6NFE2 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.49□□□□□ -2.33
SMCO2A6NFE2 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.49□□□□□ -2.33
SMCO2A6NFE2 SNORA25.10-201ENST00000515926 124 ntBASIC0.49□□□□□ -2.33
SMCO2A6NFE2 RNU6-496P-201ENST00000516145 99 ntBASIC0.49□□□□□ -2.33
SMCO2A6NFE2 RNU6-1337P-201ENST00000516525 95 ntBASIC0.49□□□□□ -2.33
SMCO2A6NFE2 RNU7-43P-201ENST00000516554 64 ntBASIC0.49□□□□□ -2.33
SMCO2A6NFE2 RNU6-1016P-201ENST00000516689 94 ntBASIC0.49□□□□□ -2.33
SMCO2A6NFE2 AC018659.1-201ENST00000551083 169 ntBASIC0.49□□□□□ -2.33
SMCO2A6NFE2 AC245505.1-201ENST00000556398 224 ntBASIC0.49□□□□□ -2.33
SMCO2A6NFE2 MIR4764-201ENST00000580680 88 ntBASIC0.49□□□□□ -2.33
SMCO2A6NFE2 RNU6-1301P-201ENST00000362724 104 ntBASIC0.48□□□□□ -2.33
SMCO2A6NFE2 RNA5SP48-201ENST00000363969 126 ntBASIC0.48□□□□□ -2.33
SMCO2A6NFE2 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
SMCO2A6NFE2 SNORD116-2-201ENST00000384274 95 ntBASIC0.48□□□□□ -2.33
SMCO2A6NFE2 Y_RNA.554-201ENST00000384672 102 ntBASIC0.48□□□□□ -2.33
SMCO2A6NFE2 SNORD116-6-201ENST00000384711 96 ntBASIC0.48□□□□□ -2.33
SMCO2A6NFE2 MIR15B-201ENST00000385045 98 ntBASIC0.48□□□□□ -2.33
SMCO2A6NFE2 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
SMCO2A6NFE2 MTND2P22-201ENST00000444325 1033 ntBASIC0.48□□□□□ -2.33
SMCO2A6NFE2 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.48□□□□□ -2.33
SMCO2A6NFE2 MIR4790-201ENST00000577799 79 ntBASIC0.48□□□□□ -2.33
SMCO2A6NFE2 AC048344.4-201ENST00000619744 527 ntBASIC0.48□□□□□ -2.33
SMCO2A6NFE2 AC100810.6-201ENST00000638068 285 ntBASIC0.48□□□□□ -2.33
SMCO2A6NFE2 RNU6-945P-201ENST00000383947 107 ntBASIC0.47□□□□□ -2.33
SMCO2A6NFE2 MIR489-201ENST00000384923 84 ntBASIC0.47□□□□□ -2.33
SMCO2A6NFE2 SNORD111-201ENST00000408139 94 ntBASIC0.47□□□□□ -2.33
SMCO2A6NFE2 MIR548K-201ENST00000408406 116 ntBASIC0.47□□□□□ -2.33
SMCO2A6NFE2 Y_RNA.594-201ENST00000410373 140 ntBASIC0.47□□□□□ -2.33
SMCO2A6NFE2 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.47□□□□□ -2.33
SMCO2A6NFE2 AC244098.3-201ENST00000424803 96 ntBASIC0.47□□□□□ -2.33
SMCO2A6NFE2 RNU6-329P-201ENST00000459618 107 ntBASIC0.47□□□□□ -2.33
SMCO2A6NFE2 Y_RNA.670-201ENST00000516255 105 ntBASIC0.47□□□□□ -2.33
SMCO2A6NFE2 RNU6-94P-201ENST00000607728 107 ntBASIC0.47□□□□□ -2.33
SMCO2A6NFE2 Y_RNA.118-201ENST00000363300 101 ntBASIC0.46□□□□□ -2.34
SMCO2A6NFE2 RNU4-75P-201ENST00000364621 146 ntBASIC0.46□□□□□ -2.34
SMCO2A6NFE2 SNORD14.1-201ENST00000365609 90 ntBASIC0.46□□□□□ -2.34
SMCO2A6NFE2 RNU6-1067P-201ENST00000384752 107 ntBASIC0.46□□□□□ -2.34
SMCO2A6NFE2 MIR598-201ENST00000384868 97 ntBASIC0.46□□□□□ -2.34
SMCO2A6NFE2 MIR516B2-201ENST00000385190 85 ntBASIC0.46□□□□□ -2.34
SMCO2A6NFE2 RNU6-1050P-201ENST00000410388 107 ntBASIC0.46□□□□□ -2.34
SMCO2A6NFE2 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.46□□□□□ -2.34
SMCO2A6NFE2 Z83846.1-201ENST00000446798 265 ntBASIC0.46□□□□□ -2.34
SMCO2A6NFE2 RNU7-87P-201ENST00000459343 62 ntBASIC0.46□□□□□ -2.34
SMCO2A6NFE2 RNU4-57P-201ENST00000515980 135 ntBASIC0.46□□□□□ -2.34
SMCO2A6NFE2 RNU4-49P-201ENST00000516080 140 ntBASIC0.46□□□□□ -2.34
SMCO2A6NFE2 MIR2355-201ENST00000517199 87 ntBASIC0.46□□□□□ -2.34
SMCO2A6NFE2 AC022616.4-201ENST00000522985 181 ntBASIC0.46□□□□□ -2.34
SMCO2A6NFE2 EIF1P4-201ENST00000572664 335 ntBASIC0.46□□□□□ -2.34
SMCO2A6NFE2 AC015540.1-201ENST00000615828 501 ntBASIC0.46□□□□□ -2.34
SMCO2A6NFE2 MIR5087-201ENST00000635826 76 ntBASIC0.46□□□□□ -2.34
SMCO2A6NFE2 Y_RNA.253-201ENST00000364562 112 ntBASIC0.45□□□□□ -2.34
SMCO2A6NFE2 SNORD12B-201ENST00000410433 91 ntBASIC0.45□□□□□ -2.34
SMCO2A6NFE2 MRPS18CP6-201ENST00000423587 223 ntBASIC0.45□□□□□ -2.34
SMCO2A6NFE2 AC011352.1-201ENST00000512300 793 ntBASIC0.45□□□□□ -2.34
SMCO2A6NFE2 AF235103.2-201ENST00000525753 346 ntBASIC0.45□□□□□ -2.34
SMCO2A6NFE2 AC055872.1-201ENST00000570978 278 ntBASIC0.45□□□□□ -2.34
SMCO2A6NFE2 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.45□□□□□ -2.34
SMCO2A6NFE2 AC018638.8-201ENST00000588755 281 ntBASIC0.45□□□□□ -2.34
SMCO2A6NFE2 Y_RNA.339-201ENST00000365325 102 ntBASIC0.44□□□□□ -2.34
SMCO2A6NFE2 Y_RNA.473-201ENST00000384333 102 ntBASIC0.44□□□□□ -2.34
SMCO2A6NFE2 RNU1-119P-201ENST00000391122 165 ntBASIC0.44□□□□□ -2.34
SMCO2A6NFE2 MIR1827-201ENST00000408549 66 ntBASIC0.44□□□□□ -2.34
SMCO2A6NFE2 Y_RNA.621-201ENST00000411065 96 ntBASIC0.44□□□□□ -2.34
SMCO2A6NFE2 RNU2-61P-201ENST00000411069 191 ntBASIC0.44□□□□□ -2.34
SMCO2A6NFE2 AC092423.1-201ENST00000430165 186 ntBASIC0.44□□□□□ -2.34
SMCO2A6NFE2 SNORD123-201ENST00000459473 70 ntBASIC0.44□□□□□ -2.34
SMCO2A6NFE2 Y_RNA.682-201ENST00000516457 100 ntBASIC0.44□□□□□ -2.34
SMCO2A6NFE2 SNORD45.4-201ENST00000516629 73 ntBASIC0.44□□□□□ -2.34
SMCO2A6NFE2 AC060780.3-201ENST00000589464 80 ntBASIC0.44□□□□□ -2.34
SMCO2A6NFE2 AL136317.1-201ENST00000612653 226 ntBASIC0.44□□□□□ -2.34
SMCO2A6NFE2 AC004467.1-201ENST00000615678 330 ntBASIC0.44□□□□□ -2.34
SMCO2A6NFE2 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.44□□□□□ -2.34
SMCO2A6NFE2 PVT1_3.1-201ENST00000620853 95 ntBASIC0.44□□□□□ -2.34
SMCO2A6NFE2 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms