Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 SNORD116-8-201ENST00000384365 95 ntBASIC0.26□□□□□ -2.37
USH1CQ9Y6N9 Y_RNA.490-201ENST00000384413 102 ntBASIC0.26□□□□□ -2.37
USH1CQ9Y6N9 Y_RNA.524-201ENST00000384564 100 ntBASIC0.26□□□□□ -2.37
USH1CQ9Y6N9 Y_RNA.530-201ENST00000384587 101 ntBASIC0.26□□□□□ -2.37
USH1CQ9Y6N9 Y_RNA.561-201ENST00000384694 100 ntBASIC0.26□□□□□ -2.37
USH1CQ9Y6N9 MTCO3P40-201ENST00000392516 676 ntBASIC0.26□□□□□ -2.37
USH1CQ9Y6N9 MIR873-201ENST00000401120 77 ntBASIC0.26□□□□□ -2.37
USH1CQ9Y6N9 SNORD111-201ENST00000408139 94 ntBASIC0.26□□□□□ -2.37
USH1CQ9Y6N9 MIR1298-201ENST00000408783 112 ntBASIC0.26□□□□□ -2.37
USH1CQ9Y6N9 RNU6-1001P-201ENST00000411265 100 ntBASIC0.26□□□□□ -2.37
USH1CQ9Y6N9 AL358176.2-201ENST00000425769 204 ntBASIC0.26□□□□□ -2.37
USH1CQ9Y6N9 EIF1P2-201ENST00000428233 350 ntBASIC0.26□□□□□ -2.37
USH1CQ9Y6N9 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.26□□□□□ -2.37
USH1CQ9Y6N9 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.26□□□□□ -2.37
USH1CQ9Y6N9 AC019235.1-201ENST00000503847 207 ntBASIC0.26□□□□□ -2.37
USH1CQ9Y6N9 AC010424.1-201ENST00000506336 297 ntBASIC0.26□□□□□ -2.37
USH1CQ9Y6N9 AC114811.1-201ENST00000507207 168 ntBASIC0.26□□□□□ -2.37
USH1CQ9Y6N9 RNU6-1096P-201ENST00000517089 102 ntBASIC0.26□□□□□ -2.37
USH1CQ9Y6N9 AF235103.2-201ENST00000525753 346 ntBASIC0.26□□□□□ -2.37
USH1CQ9Y6N9 AC006362.1-201ENST00000567392 174 ntBASIC0.26□□□□□ -2.37
USH1CQ9Y6N9 AC019193.3-201ENST00000609144 554 ntBASIC0.26□□□□□ -2.37
USH1CQ9Y6N9 AC127459.3-201ENST00000624328 466 ntBASIC0.26□□□□□ -2.37
USH1CQ9Y6N9 AC124864.2-201ENST00000624736 186 ntBASIC0.26□□□□□ -2.37
USH1CQ9Y6N9 AC073544.1-201ENST00000600110 1595 ntBASIC0.26□□□□□ -2.37
USH1CQ9Y6N9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.26□□□□□ -2.37
USH1CQ9Y6N9 ZNF299P-201ENST00000406845 1804 ntBASIC0.25□□□□□ -2.37
USH1CQ9Y6N9 SNORD68-201ENST00000363214 84 ntBASIC0.25□□□□□ -2.37
USH1CQ9Y6N9 RNU6-136P-201ENST00000384663 107 ntBASIC0.25□□□□□ -2.37
USH1CQ9Y6N9 MIR625-201ENST00000385047 85 ntBASIC0.25□□□□□ -2.37
USH1CQ9Y6N9 SNORD105-201ENST00000386910 85 ntBASIC0.25□□□□□ -2.37
USH1CQ9Y6N9 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.25□□□□□ -2.37
USH1CQ9Y6N9 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.25□□□□□ -2.37
USH1CQ9Y6N9 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.25□□□□□ -2.37
USH1CQ9Y6N9 SEPT14P3-201ENST00000439401 183 ntBASIC0.25□□□□□ -2.37
USH1CQ9Y6N9 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.25□□□□□ -2.37
USH1CQ9Y6N9 AL732372.2-207ENST00000445840 183 ntBASIC0.25□□□□□ -2.37
USH1CQ9Y6N9 PCNPP5-201ENST00000452246 481 ntBASIC0.25□□□□□ -2.37
USH1CQ9Y6N9 SEPT14P2-201ENST00000453405 183 ntBASIC0.25□□□□□ -2.37
USH1CQ9Y6N9 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.25□□□□□ -2.37
USH1CQ9Y6N9 SEPT14P4-201ENST00000513445 186 ntBASIC0.25□□□□□ -2.37
USH1CQ9Y6N9 SNORA62.5-201ENST00000516634 120 ntBASIC0.25□□□□□ -2.37
USH1CQ9Y6N9 RNA5SP330-201ENST00000517096 96 ntBASIC0.25□□□□□ -2.37
USH1CQ9Y6N9 FO082796.1-201ENST00000523795 183 ntBASIC0.25□□□□□ -2.37
USH1CQ9Y6N9 AC093023.1-201ENST00000547375 507 ntBASIC0.25□□□□□ -2.37
USH1CQ9Y6N9 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.25□□□□□ -2.37
USH1CQ9Y6N9 MIR4300-201ENST00000581016 96 ntBASIC0.25□□□□□ -2.37
USH1CQ9Y6N9 AC090582.1-201ENST00000636321 199 ntBASIC0.25□□□□□ -2.37
USH1CQ9Y6N9 RNU6-451P-201ENST00000362921 107 ntBASIC0.24□□□□□ -2.37
USH1CQ9Y6N9 Y_RNA.115-201ENST00000363272 98 ntBASIC0.24□□□□□ -2.37
USH1CQ9Y6N9 Y_RNA.373-201ENST00000365600 103 ntBASIC0.24□□□□□ -2.37
USH1CQ9Y6N9 SNORD116-11-201ENST00000383882 92 ntBASIC0.24□□□□□ -2.37
USH1CQ9Y6N9 MIR516B2-201ENST00000385190 85 ntBASIC0.24□□□□□ -2.37
USH1CQ9Y6N9 RNU6-780P-201ENST00000391030 104 ntBASIC0.24□□□□□ -2.37
USH1CQ9Y6N9 MIR1827-201ENST00000408549 66 ntBASIC0.24□□□□□ -2.37
USH1CQ9Y6N9 RNU6-177P-201ENST00000411257 104 ntBASIC0.24□□□□□ -2.37
USH1CQ9Y6N9 RNU11-2P-201ENST00000516898 142 ntBASIC0.24□□□□□ -2.37
USH1CQ9Y6N9 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.24□□□□□ -2.37
USH1CQ9Y6N9 MIR5701-3-201ENST00000578890 82 ntBASIC0.24□□□□□ -2.37
USH1CQ9Y6N9 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
USH1CQ9Y6N9 MIR5701-1-201ENST00000585138 82 ntBASIC0.24□□□□□ -2.37
USH1CQ9Y6N9 DISC2.1-201ENST00000612827 205 ntBASIC0.24□□□□□ -2.37
USH1CQ9Y6N9 MIR5701-2-201ENST00000615634 82 ntBASIC0.24□□□□□ -2.37
USH1CQ9Y6N9 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
USH1CQ9Y6N9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
USH1CQ9Y6N9 Y_RNA.243-201ENST00000364481 109 ntBASIC0.23□□□□□ -2.37
USH1CQ9Y6N9 Y_RNA.258-201ENST00000364613 105 ntBASIC0.23□□□□□ -2.37
USH1CQ9Y6N9 SNORD14.1-201ENST00000365609 90 ntBASIC0.23□□□□□ -2.37
USH1CQ9Y6N9 RNU6-716P-201ENST00000365621 103 ntBASIC0.23□□□□□ -2.37
USH1CQ9Y6N9 MIR140-201ENST00000385282 100 ntBASIC0.23□□□□□ -2.37
USH1CQ9Y6N9 RNU2-66P-201ENST00000410650 161 ntBASIC0.23□□□□□ -2.37
USH1CQ9Y6N9 RNU2-70P-201ENST00000410718 179 ntBASIC0.23□□□□□ -2.37
USH1CQ9Y6N9 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.23□□□□□ -2.37
USH1CQ9Y6N9 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.23□□□□□ -2.37
USH1CQ9Y6N9 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.23□□□□□ -2.37
USH1CQ9Y6N9 USMG5P1-201ENST00000425964 177 ntBASIC0.23□□□□□ -2.37
USH1CQ9Y6N9 USP9YP16-201ENST00000430287 407 ntBASIC0.23□□□□□ -2.37
USH1CQ9Y6N9 USP9YP23-201ENST00000455085 407 ntBASIC0.23□□□□□ -2.37
USH1CQ9Y6N9 AC074133.1-201ENST00000515696 183 ntBASIC0.23□□□□□ -2.37
USH1CQ9Y6N9 AL512360.1-201ENST00000555346 234 ntBASIC0.23□□□□□ -2.37
USH1CQ9Y6N9 AC090617.3-201ENST00000573670 475 ntBASIC0.23□□□□□ -2.37
USH1CQ9Y6N9 MIR4764-201ENST00000580680 88 ntBASIC0.23□□□□□ -2.37
USH1CQ9Y6N9 MIRLET7D-201ENST00000362263 87 ntBASIC0.22□□□□□ -2.37
USH1CQ9Y6N9 RNU6-369P-201ENST00000362515 102 ntBASIC0.22□□□□□ -2.37
USH1CQ9Y6N9 Y_RNA.106-201ENST00000363189 100 ntBASIC0.22□□□□□ -2.37
USH1CQ9Y6N9 RNA5SP48-201ENST00000363969 126 ntBASIC0.22□□□□□ -2.37
USH1CQ9Y6N9 RNU6-259P-201ENST00000383999 107 ntBASIC0.22□□□□□ -2.37
USH1CQ9Y6N9 Y_RNA.414-201ENST00000384011 101 ntBASIC0.22□□□□□ -2.37
USH1CQ9Y6N9 RNU6-842P-201ENST00000384269 107 ntBASIC0.22□□□□□ -2.37
USH1CQ9Y6N9 RNU6-306P-201ENST00000384617 107 ntBASIC0.22□□□□□ -2.37
USH1CQ9Y6N9 AL354751.2-201ENST00000415471 210 ntBASIC0.22□□□□□ -2.37
USH1CQ9Y6N9 UQCRBP2-201ENST00000447827 297 ntBASIC0.22□□□□□ -2.37
USH1CQ9Y6N9 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.22□□□□□ -2.37
USH1CQ9Y6N9 RNU6-63P-201ENST00000516690 95 ntBASIC0.22□□□□□ -2.37
USH1CQ9Y6N9 AC018448.1-201ENST00000552843 316 ntBASIC0.22□□□□□ -2.37
USH1CQ9Y6N9 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.22□□□□□ -2.37
USH1CQ9Y6N9 MIR4514-201ENST00000581410 57 ntBASIC0.22□□□□□ -2.37
USH1CQ9Y6N9 AL162413.1-201ENST00000603198 110 ntBASIC0.22□□□□□ -2.37
USH1CQ9Y6N9 AC100812.1-201ENST00000607622 580 ntBASIC0.22□□□□□ -2.37
USH1CQ9Y6N9 AL591926.4-201ENST00000616895 298 ntBASIC0.22□□□□□ -2.37
USH1CQ9Y6N9 Y_RNA.85-201ENST00000363014 111 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms