Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.93□□□□□ -2.1
SNX9Q9Y5X1 RPL39P38-201ENST00000467018 153 ntBASIC1.93□□□□□ -2.1
SNX9Q9Y5X1 RNU6-1041P-201ENST00000516254 102 ntBASIC1.93□□□□□ -2.1
SNX9Q9Y5X1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.93□□□□□ -2.1
SNX9Q9Y5X1 MIR3128-201ENST00000581957 66 ntBASIC1.93□□□□□ -2.1
SNX9Q9Y5X1 AC084768.2-201ENST00000622736 221 ntBASIC1.93□□□□□ -2.1
SNX9Q9Y5X1 AC006435.5-201ENST00000624486 112 ntBASIC1.93□□□□□ -2.1
SNX9Q9Y5X1 U6.108-201ENST00000637764 58 ntBASIC1.93□□□□□ -2.1
SNX9Q9Y5X1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SNX9Q9Y5X1 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
SNX9Q9Y5X1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SNX9Q9Y5X1 UBE2WP1-201ENST00000362030 340 ntBASIC1.92□□□□□ -2.1
SNX9Q9Y5X1 SNORD115-3-201ENST00000363100 82 ntBASIC1.92□□□□□ -2.1
SNX9Q9Y5X1 RNU6-324P-201ENST00000363957 106 ntBASIC1.92□□□□□ -2.1
SNX9Q9Y5X1 RNU1-96P-201ENST00000364163 162 ntBASIC1.92□□□□□ -2.1
SNX9Q9Y5X1 Y_RNA.539-201ENST00000384635 107 ntBASIC1.92□□□□□ -2.1
SNX9Q9Y5X1 RNA5SP212-201ENST00000391223 107 ntBASIC1.92□□□□□ -2.1
SNX9Q9Y5X1 AL603910.2-201ENST00000407268 136 ntBASIC1.92□□□□□ -2.1
SNX9Q9Y5X1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.92□□□□□ -2.1
SNX9Q9Y5X1 AC099677.2-201ENST00000436385 175 ntBASIC1.92□□□□□ -2.1
SNX9Q9Y5X1 MTND4LP30-201ENST00000454092 297 ntBASIC1.92□□□□□ -2.1
SNX9Q9Y5X1 snoU13.23-201ENST00000458863 104 ntBASIC1.92□□□□□ -2.1
SNX9Q9Y5X1 AC091959.1-201ENST00000495857 238 ntBASIC1.92□□□□□ -2.1
SNX9Q9Y5X1 SNORA27.4-201ENST00000516650 95 ntBASIC1.92□□□□□ -2.1
SNX9Q9Y5X1 RNU7-128P-201ENST00000517247 62 ntBASIC1.92□□□□□ -2.1
SNX9Q9Y5X1 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.92□□□□□ -2.1
SNX9Q9Y5X1 DEFB122-202ENST00000569013 197 ntBASIC1.92□□□□□ -2.1
SNX9Q9Y5X1 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.92□□□□□ -2.1
SNX9Q9Y5X1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
SNX9Q9Y5X1 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.91□□□□□ -2.1
SNX9Q9Y5X1 snoU2-30.2-201ENST00000362805 70 ntBASIC1.91□□□□□ -2.1
SNX9Q9Y5X1 RNU6-801P-201ENST00000364087 105 ntBASIC1.91□□□□□ -2.1
SNX9Q9Y5X1 Y_RNA.217-201ENST00000364214 105 ntBASIC1.91□□□□□ -2.1
SNX9Q9Y5X1 Y_RNA.310-201ENST00000365063 113 ntBASIC1.91□□□□□ -2.1
SNX9Q9Y5X1 RNU6-117P-201ENST00000365415 107 ntBASIC1.91□□□□□ -2.1
SNX9Q9Y5X1 Y_RNA.416-201ENST00000384014 113 ntBASIC1.91□□□□□ -2.1
SNX9Q9Y5X1 SNORA53-201ENST00000391141 249 ntBASIC1.91□□□□□ -2.1
SNX9Q9Y5X1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SNX9Q9Y5X1 Y_RNA.641-201ENST00000459414 105 ntBASIC1.91□□□□□ -2.1
SNX9Q9Y5X1 RPS26P55-201ENST00000471178 356 ntBASIC1.91□□□□□ -2.1
SNX9Q9Y5X1 RNA5SP20-201ENST00000515976 84 ntBASIC1.91□□□□□ -2.1
SNX9Q9Y5X1 RNU6-237P-201ENST00000515985 71 ntBASIC1.91□□□□□ -2.1
SNX9Q9Y5X1 RNU6-548P-201ENST00000517083 115 ntBASIC1.91□□□□□ -2.1
SNX9Q9Y5X1 AC027419.1-201ENST00000522976 328 ntBASIC1.91□□□□□ -2.1
SNX9Q9Y5X1 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.91□□□□□ -2.1
SNX9Q9Y5X1 MIR3122-201ENST00000577243 73 ntBASIC1.91□□□□□ -2.1
SNX9Q9Y5X1 U2.14-201ENST00000615943 113 ntBASIC1.91□□□□□ -2.1
SNX9Q9Y5X1 U6.73-201ENST00000619194 103 ntBASIC1.91□□□□□ -2.1
SNX9Q9Y5X1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.9□□□□□ -2.1
SNX9Q9Y5X1 Y_RNA.20-201ENST00000362479 113 ntBASIC1.9□□□□□ -2.11
SNX9Q9Y5X1 RNU6-1266P-201ENST00000362794 105 ntBASIC1.9□□□□□ -2.11
SNX9Q9Y5X1 SNORA33-201ENST00000363664 130 ntBASIC1.9□□□□□ -2.11
SNX9Q9Y5X1 RNU6-379P-201ENST00000363813 104 ntBASIC1.9□□□□□ -2.11
SNX9Q9Y5X1 Y_RNA.188-201ENST00000363952 111 ntBASIC1.9□□□□□ -2.11
SNX9Q9Y5X1 RNU6-740P-201ENST00000364734 105 ntBASIC1.9□□□□□ -2.11
SNX9Q9Y5X1 Y_RNA.352-201ENST00000365439 102 ntBASIC1.9□□□□□ -2.11
SNX9Q9Y5X1 Y_RNA.368-201ENST00000365547 113 ntBASIC1.9□□□□□ -2.11
SNX9Q9Y5X1 Y_RNA.477-201ENST00000384352 108 ntBASIC1.9□□□□□ -2.11
SNX9Q9Y5X1 RNU6-417P-201ENST00000384712 107 ntBASIC1.9□□□□□ -2.11
SNX9Q9Y5X1 Y_RNA.618-201ENST00000410949 107 ntBASIC1.9□□□□□ -2.11
SNX9Q9Y5X1 RNA5SP489-201ENST00000410986 109 ntBASIC1.9□□□□□ -2.11
SNX9Q9Y5X1 RNU6-651P-201ENST00000411040 105 ntBASIC1.9□□□□□ -2.11
SNX9Q9Y5X1 RPL31P63-201ENST00000422565 375 ntBASIC1.9□□□□□ -2.11
SNX9Q9Y5X1 HSPE1P13-201ENST00000451143 297 ntBASIC1.9□□□□□ -2.11
SNX9Q9Y5X1 ATP5J2P3-201ENST00000451550 258 ntBASIC1.9□□□□□ -2.11
SNX9Q9Y5X1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SNX9Q9Y5X1 RNU6-1023P-201ENST00000516137 106 ntBASIC1.9□□□□□ -2.11
SNX9Q9Y5X1 Y_RNA.673-201ENST00000516306 88 ntBASIC1.9□□□□□ -2.11
SNX9Q9Y5X1 AC015712.3-201ENST00000559380 164 ntBASIC1.9□□□□□ -2.11
SNX9Q9Y5X1 MIR4419B-201ENST00000577260 68 ntBASIC1.9□□□□□ -2.11
SNX9Q9Y5X1 MIR4769-201ENST00000584126 77 ntBASIC1.9□□□□□ -2.11
SNX9Q9Y5X1 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.9□□□□□ -2.11
SNX9Q9Y5X1 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.9□□□□□ -2.11
SNX9Q9Y5X1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.9□□□□□ -2.11
SNX9Q9Y5X1 MIR8081-201ENST00000611533 95 ntBASIC1.9□□□□□ -2.11
SNX9Q9Y5X1 Y_RNA.60-201ENST00000362831 98 ntBASIC1.89□□□□□ -2.11
SNX9Q9Y5X1 RNU6-23P-201ENST00000363283 107 ntBASIC1.89□□□□□ -2.11
SNX9Q9Y5X1 RNU1-22P-201ENST00000363334 158 ntBASIC1.89□□□□□ -2.11
SNX9Q9Y5X1 Y_RNA.275-201ENST00000364726 110 ntBASIC1.89□□□□□ -2.11
SNX9Q9Y5X1 MIR597-201ENST00000384968 97 ntBASIC1.89□□□□□ -2.11
SNX9Q9Y5X1 RNA5SP467-201ENST00000391274 118 ntBASIC1.89□□□□□ -2.11
SNX9Q9Y5X1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.89□□□□□ -2.11
SNX9Q9Y5X1 HMGN2P23-201ENST00000456759 269 ntBASIC1.89□□□□□ -2.11
SNX9Q9Y5X1 Y_RNA.637-201ENST00000459424 114 ntBASIC1.89□□□□□ -2.11
SNX9Q9Y5X1 AC108210.2-201ENST00000503681 201 ntBASIC1.89□□□□□ -2.11
SNX9Q9Y5X1 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.89□□□□□ -2.11
SNX9Q9Y5X1 RNU6-1337P-201ENST00000516525 95 ntBASIC1.89□□□□□ -2.11
SNX9Q9Y5X1 RNU6-1271P-201ENST00000517049 105 ntBASIC1.89□□□□□ -2.11
SNX9Q9Y5X1 AC136628.3-201ENST00000521868 290 ntBASIC1.89□□□□□ -2.11
SNX9Q9Y5X1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.89□□□□□ -2.11
SNX9Q9Y5X1 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.89□□□□□ -2.11
SNX9Q9Y5X1 U1.36-201ENST00000620684 176 ntBASIC1.89□□□□□ -2.11
SNX9Q9Y5X1 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.89□□□□□ -2.11
SNX9Q9Y5X1 AC068700.1-201ENST00000565862 3754 ntBASIC1.88□□□□□ -2.11
SNX9Q9Y5X1 SNORA25.1-201ENST00000362326 128 ntBASIC1.88□□□□□ -2.11
SNX9Q9Y5X1 Y_RNA.44-201ENST00000362676 108 ntBASIC1.88□□□□□ -2.11
SNX9Q9Y5X1 RNU6-862P-201ENST00000362804 105 ntBASIC1.88□□□□□ -2.11
SNX9Q9Y5X1 RNU6-271P-201ENST00000363858 105 ntBASIC1.88□□□□□ -2.11
SNX9Q9Y5X1 Y_RNA.277-201ENST00000364754 102 ntBASIC1.88□□□□□ -2.11
SNX9Q9Y5X1 RNU6-662P-201ENST00000384253 104 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 282 ms