Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PCDHA13Q9Y5I0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PCDHA13Q9Y5I0 RNU4-82P-201ENST00000362443 140 ntBASIC2.36□□□□□ -2.03
PCDHA13Q9Y5I0 Y_RNA.29-201ENST00000362570 113 ntBASIC2.36□□□□□ -2.03
PCDHA13Q9Y5I0 RNA5SP393-201ENST00000363423 117 ntBASIC2.36□□□□□ -2.03
PCDHA13Q9Y5I0 RNU4-13P-201ENST00000364019 141 ntBASIC2.36□□□□□ -2.03
PCDHA13Q9Y5I0 SNORA3A-201ENST00000364113 130 ntBASIC2.36□□□□□ -2.03
PCDHA13Q9Y5I0 SNORA72-201ENST00000384339 132 ntBASIC2.36□□□□□ -2.03
PCDHA13Q9Y5I0 MIR520G-201ENST00000385064 90 ntBASIC2.36□□□□□ -2.03
PCDHA13Q9Y5I0 AC117454.1-201ENST00000491120 168 ntBASIC2.36□□□□□ -2.03
PCDHA13Q9Y5I0 SNORA31.25-201ENST00000517242 134 ntBASIC2.36□□□□□ -2.03
PCDHA13Q9Y5I0 AC024405.2-202ENST00000532731 184 ntBASIC2.36□□□□□ -2.03
PCDHA13Q9Y5I0 CBX3P4-201ENST00000538909 354 ntBASIC2.36□□□□□ -2.03
PCDHA13Q9Y5I0 MIR5194-201ENST00000582634 120 ntBASIC2.36□□□□□ -2.03
PCDHA13Q9Y5I0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDHA13Q9Y5I0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDHA13Q9Y5I0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDHA13Q9Y5I0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
PCDHA13Q9Y5I0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PCDHA13Q9Y5I0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
PCDHA13Q9Y5I0 RNU6-1205P-201ENST00000363625 106 ntBASIC2.35□□□□□ -2.03
PCDHA13Q9Y5I0 SNORA67.4-201ENST00000384688 142 ntBASIC2.35□□□□□ -2.03
PCDHA13Q9Y5I0 MIR562-201ENST00000384894 95 ntBASIC2.35□□□□□ -2.03
PCDHA13Q9Y5I0 MIR526A2-201ENST00000390198 65 ntBASIC2.35□□□□□ -2.03
PCDHA13Q9Y5I0 SNORA36B-201ENST00000410438 131 ntBASIC2.35□□□□□ -2.03
PCDHA13Q9Y5I0 RNA5SP508-201ENST00000411327 119 ntBASIC2.35□□□□□ -2.03
PCDHA13Q9Y5I0 SUMO1P4-201ENST00000429430 302 ntBASIC2.35□□□□□ -2.03
PCDHA13Q9Y5I0 HMGN2P3-201ENST00000433603 273 ntBASIC2.35□□□□□ -2.03
PCDHA13Q9Y5I0 HMGN2P5-201ENST00000436882 273 ntBASIC2.35□□□□□ -2.03
PCDHA13Q9Y5I0 Z98949.2-201ENST00000440996 144 ntBASIC2.35□□□□□ -2.03
PCDHA13Q9Y5I0 Y_RNA.644-201ENST00000459006 113 ntBASIC2.35□□□□□ -2.03
PCDHA13Q9Y5I0 RNU7-94P-201ENST00000459576 63 ntBASIC2.35□□□□□ -2.03
PCDHA13Q9Y5I0 Y_RNA.674-201ENST00000516362 113 ntBASIC2.35□□□□□ -2.03
PCDHA13Q9Y5I0 RNU1-104P-201ENST00000517280 175 ntBASIC2.35□□□□□ -2.03
PCDHA13Q9Y5I0 SNORA81.3-201ENST00000517283 198 ntBASIC2.35□□□□□ -2.03
PCDHA13Q9Y5I0 AC091178.2-201ENST00000584401 117 ntBASIC2.35□□□□□ -2.03
PCDHA13Q9Y5I0 AC073413.2-201ENST00000604332 360 ntBASIC2.35□□□□□ -2.03
PCDHA13Q9Y5I0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.35□□□□□ -2.03
PCDHA13Q9Y5I0 AC245884.12-201ENST00000615364 59 ntBASIC2.35□□□□□ -2.03
PCDHA13Q9Y5I0 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.35□□□□□ -2.03
PCDHA13Q9Y5I0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.35□□□□□ -2.03
PCDHA13Q9Y5I0 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.35□□□□□ -2.03
PCDHA13Q9Y5I0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PCDHA13Q9Y5I0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.35□□□□□ -2.03
PCDHA13Q9Y5I0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.35□□□□□ -2.03
PCDHA13Q9Y5I0 AC018630.2-201ENST00000534866 2403 ntBASIC2.34□□□□□ -2.03
PCDHA13Q9Y5I0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.03
PCDHA13Q9Y5I0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
PCDHA13Q9Y5I0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
PCDHA13Q9Y5I0 AC068700.1-201ENST00000565862 3754 ntBASIC2.34□□□□□ -2.03
PCDHA13Q9Y5I0 RNU6-674P-201ENST00000363831 107 ntBASIC2.34□□□□□ -2.03
PCDHA13Q9Y5I0 RNA5SP126-201ENST00000365092 109 ntBASIC2.34□□□□□ -2.03
PCDHA13Q9Y5I0 SNORA8-201ENST00000384574 139 ntBASIC2.34□□□□□ -2.03
PCDHA13Q9Y5I0 RNU6-136P-201ENST00000384663 107 ntBASIC2.34□□□□□ -2.03
PCDHA13Q9Y5I0 MIR221-201ENST00000385135 110 ntBASIC2.34□□□□□ -2.03
PCDHA13Q9Y5I0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
PCDHA13Q9Y5I0 RNA5SP323-201ENST00000391094 133 ntBASIC2.34□□□□□ -2.03
PCDHA13Q9Y5I0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.34□□□□□ -2.03
PCDHA13Q9Y5I0 RN7SL429P-201ENST00000479090 223 ntBASIC2.34□□□□□ -2.03
PCDHA13Q9Y5I0 RN7SL489P-201ENST00000486185 223 ntBASIC2.34□□□□□ -2.03
PCDHA13Q9Y5I0 RN7SL327P-201ENST00000488659 223 ntBASIC2.34□□□□□ -2.03
PCDHA13Q9Y5I0 AC090255.1-201ENST00000495779 349 ntBASIC2.34□□□□□ -2.03
PCDHA13Q9Y5I0 AL163195.1-201ENST00000496941 348 ntBASIC2.34□□□□□ -2.03
PCDHA13Q9Y5I0 RNU6-182P-201ENST00000516970 105 ntBASIC2.34□□□□□ -2.03
PCDHA13Q9Y5I0 AC100767.1-201ENST00000528178 123 ntBASIC2.34□□□□□ -2.03
PCDHA13Q9Y5I0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
PCDHA13Q9Y5I0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.34□□□□□ -2.03
PCDHA13Q9Y5I0 RN7SL853P-201ENST00000617250 223 ntBASIC2.34□□□□□ -2.03
PCDHA13Q9Y5I0 AP000553.5-201ENST00000641933 54 ntBASIC2.34□□□□□ -2.03
PCDHA13Q9Y5I0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
PCDHA13Q9Y5I0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.34□□□□□ -2.04
PCDHA13Q9Y5I0 SNORA33-201ENST00000363664 130 ntBASIC2.33□□□□□ -2.04
PCDHA13Q9Y5I0 RNU6-1019P-201ENST00000364424 107 ntBASIC2.33□□□□□ -2.04
PCDHA13Q9Y5I0 SNORA8.3-201ENST00000384679 139 ntBASIC2.33□□□□□ -2.04
PCDHA13Q9Y5I0 MIR597-201ENST00000384968 97 ntBASIC2.33□□□□□ -2.04
PCDHA13Q9Y5I0 MIR626-201ENST00000385032 94 ntBASIC2.33□□□□□ -2.04
PCDHA13Q9Y5I0 MTND2P29-201ENST00000438595 412 ntBASIC2.33□□□□□ -2.04
PCDHA13Q9Y5I0 RPS4XP11-201ENST00000446897 772 ntBASIC2.33□□□□□ -2.04
PCDHA13Q9Y5I0 RNU6-341P-201ENST00000516973 96 ntBASIC2.33□□□□□ -2.04
PCDHA13Q9Y5I0 AL358944.1-201ENST00000528537 144 ntBASIC2.33□□□□□ -2.04
PCDHA13Q9Y5I0 MIR4529-201ENST00000578110 78 ntBASIC2.33□□□□□ -2.04
PCDHA13Q9Y5I0 Y_RNA.802-201ENST00000614892 130 ntBASIC2.33□□□□□ -2.04
PCDHA13Q9Y5I0 CTSLP2-204ENST00000629029 392 ntBASIC2.33□□□□□ -2.04
PCDHA13Q9Y5I0 MIR6079-201ENST00000635807 62 ntBASIC2.33□□□□□ -2.04
PCDHA13Q9Y5I0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PCDHA13Q9Y5I0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PCDHA13Q9Y5I0 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PCDHA13Q9Y5I0 Y_RNA.293-201ENST00000364908 93 ntBASIC2.32□□□□□ -2.04
PCDHA13Q9Y5I0 RNA5SP37-201ENST00000365420 130 ntBASIC2.32□□□□□ -2.04
PCDHA13Q9Y5I0 Y_RNA.435-201ENST00000384095 112 ntBASIC2.32□□□□□ -2.04
PCDHA13Q9Y5I0 SNORA48.1-201ENST00000390879 135 ntBASIC2.32□□□□□ -2.04
PCDHA13Q9Y5I0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.32□□□□□ -2.04
PCDHA13Q9Y5I0 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.32□□□□□ -2.04
PCDHA13Q9Y5I0 RNU7-193P-201ENST00000516723 65 ntBASIC2.32□□□□□ -2.04
PCDHA13Q9Y5I0 AC004792.1-201ENST00000614523 137 ntBASIC2.32□□□□□ -2.04
PCDHA13Q9Y5I0 AC100821.1-201ENST00000523153 2479 ntBASIC2.32□□□□□ -2.04
PCDHA13Q9Y5I0 SNORA48.3-201ENST00000391081 134 ntBASIC2.31□□□□□ -2.04
PCDHA13Q9Y5I0 RNU6-918P-201ENST00000391219 106 ntBASIC2.31□□□□□ -2.04
PCDHA13Q9Y5I0 Y_RNA.793-201ENST00000411222 111 ntBASIC2.31□□□□□ -2.04
PCDHA13Q9Y5I0 MTND5P15-201ENST00000434246 349 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms