Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 RPS26P45-201ENST00000471748 340 ntBASIC1.98□□□□□ -2.09
PKP3Q9Y446 AC136628.3-201ENST00000521868 290 ntBASIC1.98□□□□□ -2.09
PKP3Q9Y446 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
PKP3Q9Y446 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
PKP3Q9Y446 AL359851.1-201ENST00000569460 4997 ntBASIC1.97□□□□□ -2.09
PKP3Q9Y446 Y_RNA.188-201ENST00000363952 111 ntBASIC1.97□□□□□ -2.09
PKP3Q9Y446 Y_RNA.416-201ENST00000384014 113 ntBASIC1.97□□□□□ -2.09
PKP3Q9Y446 Y_RNA.447-201ENST00000384184 113 ntBASIC1.97□□□□□ -2.09
PKP3Q9Y446 Y_RNA.477-201ENST00000384352 108 ntBASIC1.97□□□□□ -2.09
PKP3Q9Y446 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
PKP3Q9Y446 AL603910.2-201ENST00000407268 136 ntBASIC1.97□□□□□ -2.09
PKP3Q9Y446 HSPE1P21-201ENST00000438283 308 ntBASIC1.97□□□□□ -2.09
PKP3Q9Y446 AC069257.2-201ENST00000441819 155 ntBASIC1.97□□□□□ -2.09
PKP3Q9Y446 RPL36AP21-201ENST00000490372 323 ntBASIC1.97□□□□□ -2.09
PKP3Q9Y446 AL163195.1-201ENST00000496941 348 ntBASIC1.97□□□□□ -2.09
PKP3Q9Y446 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.97□□□□□ -2.09
PKP3Q9Y446 AC084364.2-201ENST00000546924 395 ntBASIC1.97□□□□□ -2.09
PKP3Q9Y446 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.97□□□□□ -2.09
PKP3Q9Y446 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.97□□□□□ -2.09
PKP3Q9Y446 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.09
PKP3Q9Y446 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.96□□□□□ -2.1
PKP3Q9Y446 RNU6-1272P-201ENST00000362776 107 ntBASIC1.96□□□□□ -2.1
PKP3Q9Y446 RNU4-52P-201ENST00000384209 138 ntBASIC1.96□□□□□ -2.1
PKP3Q9Y446 Y_RNA.478-201ENST00000384358 107 ntBASIC1.96□□□□□ -2.1
PKP3Q9Y446 RNU6-136P-201ENST00000384663 107 ntBASIC1.96□□□□□ -2.1
PKP3Q9Y446 AC019129.1-201ENST00000403786 261 ntBASIC1.96□□□□□ -2.1
PKP3Q9Y446 RNA5SP511-201ENST00000410487 115 ntBASIC1.96□□□□□ -2.1
PKP3Q9Y446 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.96□□□□□ -2.1
PKP3Q9Y446 AL162725.1-201ENST00000435405 301 ntBASIC1.96□□□□□ -2.1
PKP3Q9Y446 RNU7-94P-201ENST00000459576 63 ntBASIC1.96□□□□□ -2.1
PKP3Q9Y446 AC015720.1-201ENST00000565251 277 ntBASIC1.96□□□□□ -2.1
PKP3Q9Y446 MIR5089-201ENST00000580047 84 ntBASIC1.96□□□□□ -2.1
PKP3Q9Y446 MIR3128-201ENST00000581957 66 ntBASIC1.96□□□□□ -2.1
PKP3Q9Y446 AC005972.2-201ENST00000604690 348 ntBASIC1.96□□□□□ -2.1
PKP3Q9Y446 AC068647.2-201ENST00000637380 353 ntBASIC1.96□□□□□ -2.1
PKP3Q9Y446 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.96□□□□□ -2.1
PKP3Q9Y446 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.96□□□□□ -2.1
PKP3Q9Y446 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
PKP3Q9Y446 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
PKP3Q9Y446 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.95□□□□□ -2.1
PKP3Q9Y446 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
PKP3Q9Y446 AC018630.2-201ENST00000534866 2403 ntBASIC1.95□□□□□ -2.1
PKP3Q9Y446 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
PKP3Q9Y446 SNORD27-201ENST00000363981 72 ntBASIC1.95□□□□□ -2.1
PKP3Q9Y446 RNU6-801P-201ENST00000364087 105 ntBASIC1.95□□□□□ -2.1
PKP3Q9Y446 Y_RNA.217-201ENST00000364214 105 ntBASIC1.95□□□□□ -2.1
PKP3Q9Y446 RNU6-740P-201ENST00000364734 105 ntBASIC1.95□□□□□ -2.1
PKP3Q9Y446 SNORA72.4-201ENST00000384174 132 ntBASIC1.95□□□□□ -2.1
PKP3Q9Y446 RNU6-1289P-201ENST00000384431 106 ntBASIC1.95□□□□□ -2.1
PKP3Q9Y446 MIR520G-201ENST00000385064 90 ntBASIC1.95□□□□□ -2.1
PKP3Q9Y446 RNU2-2P-201ENST00000410396 191 ntBASIC1.95□□□□□ -2.1
PKP3Q9Y446 AC245047.4-201ENST00000433189 144 ntBASIC1.95□□□□□ -2.1
PKP3Q9Y446 RNA5SP233-201ENST00000459153 113 ntBASIC1.95□□□□□ -2.1
PKP3Q9Y446 Y_RNA.641-201ENST00000459414 105 ntBASIC1.95□□□□□ -2.1
PKP3Q9Y446 Y_RNA.673-201ENST00000516306 88 ntBASIC1.95□□□□□ -2.1
PKP3Q9Y446 RNU6-1271P-201ENST00000517049 105 ntBASIC1.95□□□□□ -2.1
PKP3Q9Y446 SUB1P4-201ENST00000566062 339 ntBASIC1.95□□□□□ -2.1
PKP3Q9Y446 AL162424.1-201ENST00000602325 221 ntBASIC1.95□□□□□ -2.1
PKP3Q9Y446 AC006006.1-201ENST00000603082 144 ntBASIC1.95□□□□□ -2.1
PKP3Q9Y446 AC010900.2-201ENST00000604508 210 ntBASIC1.95□□□□□ -2.1
PKP3Q9Y446 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.95□□□□□ -2.1
PKP3Q9Y446 AL078604.3-201ENST00000615580 211 ntBASIC1.95□□□□□ -2.1
PKP3Q9Y446 MIR6079-201ENST00000635807 62 ntBASIC1.95□□□□□ -2.1
PKP3Q9Y446 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
PKP3Q9Y446 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.95□□□□□ -2.1
PKP3Q9Y446 ZNF355P-201ENST00000427301 3216 ntBASIC1.95□□□□□ -2.1
PKP3Q9Y446 ZNF702P-202ENST00000434269 1966 ntBASIC1.94□□□□□ -2.1
PKP3Q9Y446 RNA5SP276-201ENST00000362580 94 ntBASIC1.94□□□□□ -2.1
PKP3Q9Y446 Y_RNA.60-201ENST00000362831 98 ntBASIC1.94□□□□□ -2.1
PKP3Q9Y446 Y_RNA.277-201ENST00000364754 102 ntBASIC1.94□□□□□ -2.1
PKP3Q9Y446 SNORA20.1-201ENST00000364790 130 ntBASIC1.94□□□□□ -2.1
PKP3Q9Y446 Y_RNA.489-201ENST00000384410 101 ntBASIC1.94□□□□□ -2.1
PKP3Q9Y446 MT-TG-201ENST00000387429 68 ntBASIC1.94□□□□□ -2.1
PKP3Q9Y446 RNU6-763P-201ENST00000390865 106 ntBASIC1.94□□□□□ -2.1
PKP3Q9Y446 HMGN2P38-201ENST00000423806 265 ntBASIC1.94□□□□□ -2.1
PKP3Q9Y446 BTF3P11-201ENST00000426582 477 ntBASIC1.94□□□□□ -2.1
PKP3Q9Y446 AC091021.1-201ENST00000468051 388 ntBASIC1.94□□□□□ -2.1
PKP3Q9Y446 MTND1P19-201ENST00000511780 315 ntBASIC1.94□□□□□ -2.1
PKP3Q9Y446 RNU6-1023P-201ENST00000516137 106 ntBASIC1.94□□□□□ -2.1
PKP3Q9Y446 RNU1-41P-201ENST00000516161 162 ntBASIC1.94□□□□□ -2.1
PKP3Q9Y446 RNU1-48P-201ENST00000516400 162 ntBASIC1.94□□□□□ -2.1
PKP3Q9Y446 Y_RNA.680-201ENST00000516441 93 ntBASIC1.94□□□□□ -2.1
PKP3Q9Y446 RNU6-1096P-201ENST00000517089 102 ntBASIC1.94□□□□□ -2.1
PKP3Q9Y446 AC110588.1-201ENST00000559699 137 ntBASIC1.94□□□□□ -2.1
PKP3Q9Y446 MIR4287-201ENST00000579398 78 ntBASIC1.94□□□□□ -2.1
PKP3Q9Y446 MIR4448-201ENST00000584360 86 ntBASIC1.94□□□□□ -2.1
PKP3Q9Y446 BX284668.6-201ENST00000606899 438 ntBASIC1.94□□□□□ -2.1
PKP3Q9Y446 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.94□□□□□ -2.1
PKP3Q9Y446 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
PKP3Q9Y446 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
PKP3Q9Y446 Y_RNA.117-201ENST00000363294 101 ntBASIC1.93□□□□□ -2.1
PKP3Q9Y446 RNU6-1048P-201ENST00000364054 107 ntBASIC1.93□□□□□ -2.1
PKP3Q9Y446 RNU6-1323P-201ENST00000384025 107 ntBASIC1.93□□□□□ -2.1
PKP3Q9Y446 MIR520A-201ENST00000384862 85 ntBASIC1.93□□□□□ -2.1
PKP3Q9Y446 MIR562-201ENST00000384894 95 ntBASIC1.93□□□□□ -2.1
PKP3Q9Y446 SNORA26.5-201ENST00000391215 123 ntBASIC1.93□□□□□ -2.1
PKP3Q9Y446 Y_RNA.590-201ENST00000410140 107 ntBASIC1.93□□□□□ -2.1
PKP3Q9Y446 AC104332.1-201ENST00000440471 797 ntBASIC1.93□□□□□ -2.1
PKP3Q9Y446 Y_RNA.679-201ENST00000516416 91 ntBASIC1.93□□□□□ -2.1
PKP3Q9Y446 MIR514B-201ENST00000516774 80 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms