Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RNU6-763P-201ENST00000390865 106 ntBASIC2.35□□□□□ -2.03
SSX2IPQ9Y2D8 MIR1289-2-201ENST00000408360 111 ntBASIC2.35□□□□□ -2.03
SSX2IPQ9Y2D8 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SSX2IPQ9Y2D8 AL135790.2-201ENST00000437701 267 ntBASIC2.35□□□□□ -2.03
SSX2IPQ9Y2D8 AL603825.1-201ENST00000438481 80 ntBASIC2.35□□□□□ -2.03
SSX2IPQ9Y2D8 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.35□□□□□ -2.03
SSX2IPQ9Y2D8 RNU1-131P-201ENST00000458943 161 ntBASIC2.35□□□□□ -2.03
SSX2IPQ9Y2D8 Y_RNA.637-201ENST00000459424 114 ntBASIC2.35□□□□□ -2.03
SSX2IPQ9Y2D8 AC027419.1-201ENST00000522976 328 ntBASIC2.35□□□□□ -2.03
SSX2IPQ9Y2D8 Z83818.1-201ENST00000603584 150 ntBASIC2.35□□□□□ -2.03
SSX2IPQ9Y2D8 SNORD14A-201ENST00000606526 91 ntBASIC2.35□□□□□ -2.03
SSX2IPQ9Y2D8 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.35□□□□□ -2.03
SSX2IPQ9Y2D8 AC009831.4-201ENST00000620744 325 ntBASIC2.35□□□□□ -2.03
SSX2IPQ9Y2D8 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SSX2IPQ9Y2D8 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SSX2IPQ9Y2D8 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 SNORA3A-201ENST00000364113 130 ntBASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 Y_RNA.304-201ENST00000365011 112 ntBASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 SNORA72.4-201ENST00000384174 132 ntBASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 RNU6-160P-201ENST00000384591 107 ntBASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 SNORD23.1-201ENST00000408212 104 ntBASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 Y_RNA.644-201ENST00000459006 113 ntBASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 RPS27P22-201ENST00000478056 241 ntBASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 Y_RNA.674-201ENST00000516362 113 ntBASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 SCARNA16.3-201ENST00000516595 184 ntBASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 RNU6-548P-201ENST00000517083 115 ntBASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 SUMO2P18-201ENST00000518873 252 ntBASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 AL137100.2-201ENST00000555786 315 ntBASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 AL008718.3-201ENST00000610217 321 ntBASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 U2.15-201ENST00000611544 191 ntBASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 U2.16-201ENST00000613119 191 ntBASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 U2.12-201ENST00000613778 191 ntBASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 U2.20-201ENST00000613956 192 ntBASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 U2.9-201ENST00000615427 191 ntBASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 U2.11-201ENST00000616345 191 ntBASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 U2.2-201ENST00000616535 191 ntBASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 U2.3-201ENST00000617785 191 ntBASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 U2.19-201ENST00000618602 191 ntBASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 RNU2-1-201ENST00000618664 191 ntBASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 U2.6-201ENST00000619225 191 ntBASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 U2.5-201ENST00000619465 191 ntBASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 U2.10-201ENST00000620268 191 ntBASIC2.34□□□□□ -2.03
SSX2IPQ9Y2D8 ZNF355P-201ENST00000427301 3216 ntBASIC2.34□□□□□ -2.04
SSX2IPQ9Y2D8 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
SSX2IPQ9Y2D8 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SSX2IPQ9Y2D8 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
SSX2IPQ9Y2D8 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SSX2IPQ9Y2D8 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SSX2IPQ9Y2D8 RNU6-899P-201ENST00000363947 107 ntBASIC2.33□□□□□ -2.04
SSX2IPQ9Y2D8 Y_RNA.262-201ENST00000364641 102 ntBASIC2.33□□□□□ -2.04
SSX2IPQ9Y2D8 RNU4-52P-201ENST00000384209 138 ntBASIC2.33□□□□□ -2.04
SSX2IPQ9Y2D8 SNORA64-201ENST00000384674 134 ntBASIC2.33□□□□□ -2.04
SSX2IPQ9Y2D8 MT-TR-201ENST00000387439 65 ntBASIC2.33□□□□□ -2.04
SSX2IPQ9Y2D8 MIR1262-201ENST00000408276 93 ntBASIC2.33□□□□□ -2.04
SSX2IPQ9Y2D8 RNU2-40P-201ENST00000410833 196 ntBASIC2.33□□□□□ -2.04
SSX2IPQ9Y2D8 Y_RNA.793-201ENST00000411222 111 ntBASIC2.33□□□□□ -2.04
SSX2IPQ9Y2D8 AC009310.1-201ENST00000414414 451 ntBASIC2.33□□□□□ -2.04
SSX2IPQ9Y2D8 AC060773.1-201ENST00000421698 310 ntBASIC2.33□□□□□ -2.04
SSX2IPQ9Y2D8 AL353689.1-201ENST00000438895 199 ntBASIC2.33□□□□□ -2.04
SSX2IPQ9Y2D8 RPL36AP21-201ENST00000490372 323 ntBASIC2.33□□□□□ -2.04
SSX2IPQ9Y2D8 RNU6-1337P-201ENST00000516525 95 ntBASIC2.33□□□□□ -2.04
SSX2IPQ9Y2D8 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.33□□□□□ -2.04
SSX2IPQ9Y2D8 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SSX2IPQ9Y2D8 RNU1-148P-201ENST00000384472 162 ntBASIC2.32□□□□□ -2.04
SSX2IPQ9Y2D8 SNORA26.5-201ENST00000391215 123 ntBASIC2.32□□□□□ -2.04
SSX2IPQ9Y2D8 RPS20P10-201ENST00000451209 253 ntBASIC2.32□□□□□ -2.04
SSX2IPQ9Y2D8 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.32□□□□□ -2.04
SSX2IPQ9Y2D8 U8.19-201ENST00000459095 133 ntBASIC2.32□□□□□ -2.04
SSX2IPQ9Y2D8 AC104435.1-201ENST00000483483 166 ntBASIC2.32□□□□□ -2.04
SSX2IPQ9Y2D8 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.32□□□□□ -2.04
SSX2IPQ9Y2D8 AC011406.1-201ENST00000512440 370 ntBASIC2.32□□□□□ -2.04
SSX2IPQ9Y2D8 AC098479.1-201ENST00000609225 154 ntBASIC2.32□□□□□ -2.04
SSX2IPQ9Y2D8 AC013791.1-201ENST00000616619 62 ntBASIC2.32□□□□□ -2.04
SSX2IPQ9Y2D8 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.32□□□□□ -2.04
SSX2IPQ9Y2D8 RNA5SP99-201ENST00000364020 114 ntBASIC2.31□□□□□ -2.04
SSX2IPQ9Y2D8 Y_RNA.238-201ENST00000364441 102 ntBASIC2.31□□□□□ -2.04
SSX2IPQ9Y2D8 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.31□□□□□ -2.04
SSX2IPQ9Y2D8 AL356379.1-201ENST00000414105 126 ntBASIC2.31□□□□□ -2.04
SSX2IPQ9Y2D8 HMGN2P34-201ENST00000437647 269 ntBASIC2.31□□□□□ -2.04
SSX2IPQ9Y2D8 HSPE1P21-201ENST00000438283 308 ntBASIC2.31□□□□□ -2.04
SSX2IPQ9Y2D8 AC010409.1-201ENST00000487382 476 ntBASIC2.31□□□□□ -2.04
SSX2IPQ9Y2D8 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.31□□□□□ -2.04
SSX2IPQ9Y2D8 RNU6-1278P-201ENST00000516130 107 ntBASIC2.31□□□□□ -2.04
SSX2IPQ9Y2D8 AC024405.2-202ENST00000532731 184 ntBASIC2.31□□□□□ -2.04
SSX2IPQ9Y2D8 CBX3P4-201ENST00000538909 354 ntBASIC2.31□□□□□ -2.04
SSX2IPQ9Y2D8 MIR3126-201ENST00000577443 74 ntBASIC2.31□□□□□ -2.04
SSX2IPQ9Y2D8 MIR5692C2-201ENST00000577959 77 ntBASIC2.31□□□□□ -2.04
SSX2IPQ9Y2D8 AC002984.1-201ENST00000591692 448 ntBASIC2.31□□□□□ -2.04
SSX2IPQ9Y2D8 AC004792.1-201ENST00000614523 137 ntBASIC2.31□□□□□ -2.04
SSX2IPQ9Y2D8 AL365265.1-201ENST00000621045 234 ntBASIC2.31□□□□□ -2.04
SSX2IPQ9Y2D8 AL356292.1-201ENST00000283110 373 ntBASIC2.3□□□□□ -2.04
SSX2IPQ9Y2D8 snoU2-30.2-201ENST00000362805 70 ntBASIC2.3□□□□□ -2.04
SSX2IPQ9Y2D8 RNU6-1020P-201ENST00000363684 107 ntBASIC2.3□□□□□ -2.04
SSX2IPQ9Y2D8 SNORD114-6-201ENST00000364393 72 ntBASIC2.3□□□□□ -2.04
SSX2IPQ9Y2D8 MIR29C-201ENST00000385231 88 ntBASIC2.3□□□□□ -2.04
SSX2IPQ9Y2D8 MTCO2P33-201ENST00000402100 465 ntBASIC2.3□□□□□ -2.04
SSX2IPQ9Y2D8 PIGPP3-201ENST00000425307 415 ntBASIC2.3□□□□□ -2.04
SSX2IPQ9Y2D8 MIR4438-201ENST00000585271 93 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 219.6 ms