Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 AC100821.1-201ENST00000523153 2479 ntBASIC3.34□□□□□ -1.87
BRPF3Q9ULD4 AC096644.4-201ENST00000563417 2912 ntBASIC3.34□□□□□ -1.87
BRPF3Q9ULD4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
BRPF3Q9ULD4 RNA5SP367-201ENST00000516557 118 ntBASIC3.34□□□□□ -1.87
BRPF3Q9ULD4 RNU6-1096P-201ENST00000517089 102 ntBASIC3.34□□□□□ -1.87
BRPF3Q9ULD4 MIR3646-201ENST00000578301 84 ntBASIC3.34□□□□□ -1.87
BRPF3Q9ULD4 MIR4658-201ENST00000584344 65 ntBASIC3.34□□□□□ -1.87
BRPF3Q9ULD4 AC245884.12-201ENST00000615364 59 ntBASIC3.34□□□□□ -1.87
BRPF3Q9ULD4 MIR6844-201ENST00000637122 62 ntBASIC3.34□□□□□ -1.87
BRPF3Q9ULD4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
BRPF3Q9ULD4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
BRPF3Q9ULD4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
BRPF3Q9ULD4 SNORD114-6-201ENST00000364393 72 ntBASIC3.33□□□□□ -1.88
BRPF3Q9ULD4 Y_RNA.393-201ENST00000383936 102 ntBASIC3.33□□□□□ -1.88
BRPF3Q9ULD4 MIR520G-201ENST00000385064 90 ntBASIC3.33□□□□□ -1.88
BRPF3Q9ULD4 SNORA40-201ENST00000388090 126 ntBASIC3.33□□□□□ -1.88
BRPF3Q9ULD4 SNORA11.1-201ENST00000408133 129 ntBASIC3.33□□□□□ -1.88
BRPF3Q9ULD4 RNU2-55P-201ENST00000411146 174 ntBASIC3.33□□□□□ -1.88
BRPF3Q9ULD4 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.33□□□□□ -1.88
BRPF3Q9ULD4 AC022018.1-201ENST00000430685 241 ntBASIC3.33□□□□□ -1.88
BRPF3Q9ULD4 RPS15AP28-201ENST00000435088 386 ntBASIC3.33□□□□□ -1.88
BRPF3Q9ULD4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.33□□□□□ -1.88
BRPF3Q9ULD4 RNU7-99P-201ENST00000516271 62 ntBASIC3.33□□□□□ -1.88
BRPF3Q9ULD4 MIR338-201ENST00000636369 67 ntBASIC3.33□□□□□ -1.88
BRPF3Q9ULD4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.33□□□□□ -1.88
BRPF3Q9ULD4 RNU6-1209P-201ENST00000363655 107 ntBASIC3.32□□□□□ -1.88
BRPF3Q9ULD4 Y_RNA.432-201ENST00000384087 111 ntBASIC3.32□□□□□ -1.88
BRPF3Q9ULD4 SNORA20-201ENST00000384662 132 ntBASIC3.32□□□□□ -1.88
BRPF3Q9ULD4 MIR512-1-201ENST00000384913 84 ntBASIC3.32□□□□□ -1.88
BRPF3Q9ULD4 RNA5SP467-201ENST00000391274 118 ntBASIC3.32□□□□□ -1.88
BRPF3Q9ULD4 RNA5SP181-201ENST00000410246 98 ntBASIC3.32□□□□□ -1.88
BRPF3Q9ULD4 AC023449.1-201ENST00000454464 154 ntBASIC3.32□□□□□ -1.88
BRPF3Q9ULD4 RNU1-131P-201ENST00000458943 161 ntBASIC3.32□□□□□ -1.88
BRPF3Q9ULD4 RNU7-128P-201ENST00000517247 62 ntBASIC3.32□□□□□ -1.88
BRPF3Q9ULD4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.32□□□□□ -1.88
BRPF3Q9ULD4 MIR378D2-201ENST00000580636 98 ntBASIC3.32□□□□□ -1.88
BRPF3Q9ULD4 AC078899.2-201ENST00000595282 212 ntBASIC3.32□□□□□ -1.88
BRPF3Q9ULD4 AL353149.1-201ENST00000610667 244 ntBASIC3.32□□□□□ -1.88
BRPF3Q9ULD4 AL359075.3-201ENST00000613288 217 ntBASIC3.32□□□□□ -1.88
BRPF3Q9ULD4 uc_338.4-201ENST00000616635 176 ntBASIC3.32□□□□□ -1.88
BRPF3Q9ULD4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
BRPF3Q9ULD4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
BRPF3Q9ULD4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.31□□□□□ -1.88
BRPF3Q9ULD4 Y_RNA.796-201ENST00000364268 102 ntBASIC3.31□□□□□ -1.88
BRPF3Q9ULD4 Y_RNA.799-201ENST00000364992 102 ntBASIC3.31□□□□□ -1.88
BRPF3Q9ULD4 RNU6-1080P-201ENST00000383982 107 ntBASIC3.31□□□□□ -1.88
BRPF3Q9ULD4 RNU6-484P-201ENST00000384016 107 ntBASIC3.31□□□□□ -1.88
BRPF3Q9ULD4 RNU6-22P-201ENST00000384355 107 ntBASIC3.31□□□□□ -1.88
BRPF3Q9ULD4 MIR1262-201ENST00000408276 93 ntBASIC3.31□□□□□ -1.88
BRPF3Q9ULD4 EDDM3CP-201ENST00000415977 425 ntBASIC3.31□□□□□ -1.88
BRPF3Q9ULD4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.31□□□□□ -1.88
BRPF3Q9ULD4 AL135938.1-201ENST00000443141 297 ntBASIC3.31□□□□□ -1.88
BRPF3Q9ULD4 AC003982.1-202ENST00000469928 248 ntBASIC3.31□□□□□ -1.88
BRPF3Q9ULD4 RNU6-1299P-201ENST00000516316 100 ntBASIC3.31□□□□□ -1.88
BRPF3Q9ULD4 RNU6-62P-201ENST00000516526 102 ntBASIC3.31□□□□□ -1.88
BRPF3Q9ULD4 RNU6-197P-201ENST00000516680 100 ntBASIC3.31□□□□□ -1.88
BRPF3Q9ULD4 RNA5SP82-201ENST00000516707 92 ntBASIC3.31□□□□□ -1.88
BRPF3Q9ULD4 AC079600.2-201ENST00000550076 130 ntBASIC3.31□□□□□ -1.88
BRPF3Q9ULD4 AL033523.1-201ENST00000605153 153 ntBASIC3.31□□□□□ -1.88
BRPF3Q9ULD4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.3□□□□□ -1.88
BRPF3Q9ULD4 RNU6-851P-201ENST00000384565 107 ntBASIC3.3□□□□□ -1.88
BRPF3Q9ULD4 RNU6-160P-201ENST00000384591 107 ntBASIC3.3□□□□□ -1.88
BRPF3Q9ULD4 RNU11-5P-201ENST00000391216 129 ntBASIC3.3□□□□□ -1.88
BRPF3Q9ULD4 Y_RNA.621-201ENST00000411065 96 ntBASIC3.3□□□□□ -1.88
BRPF3Q9ULD4 MTND4LP9-201ENST00000427694 174 ntBASIC3.3□□□□□ -1.88
BRPF3Q9ULD4 RNU7-197P-201ENST00000458836 62 ntBASIC3.3□□□□□ -1.88
BRPF3Q9ULD4 SNORD11-201ENST00000459124 84 ntBASIC3.3□□□□□ -1.88
BRPF3Q9ULD4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.3□□□□□ -1.88
BRPF3Q9ULD4 SNORA74D-201ENST00000516404 141 ntBASIC3.3□□□□□ -1.88
BRPF3Q9ULD4 AC005000.2-201ENST00000605468 310 ntBASIC3.3□□□□□ -1.88
BRPF3Q9ULD4 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.3□□□□□ -1.88
BRPF3Q9ULD4 AP006437.1-201ENST00000641440 3685 ntBASIC3.3□□□□□ -1.88
BRPF3Q9ULD4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.29□□□□□ -1.88
BRPF3Q9ULD4 Y_RNA.111-201ENST00000363248 100 ntBASIC3.29□□□□□ -1.88
BRPF3Q9ULD4 Y_RNA.420-201ENST00000384043 110 ntBASIC3.29□□□□□ -1.88
BRPF3Q9ULD4 RNU6-588P-201ENST00000410281 105 ntBASIC3.29□□□□□ -1.88
BRPF3Q9ULD4 RNU2-51P-201ENST00000410708 197 ntBASIC3.29□□□□□ -1.88
BRPF3Q9ULD4 ATP5J2P3-201ENST00000451550 258 ntBASIC3.29□□□□□ -1.88
BRPF3Q9ULD4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.29□□□□□ -1.88
BRPF3Q9ULD4 SNORD77.4-201ENST00000516158 81 ntBASIC3.29□□□□□ -1.88
BRPF3Q9ULD4 AC091178.2-201ENST00000584401 117 ntBASIC3.29□□□□□ -1.88
BRPF3Q9ULD4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.28□□□□□ -1.88
BRPF3Q9ULD4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
BRPF3Q9ULD4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.28□□□□□ -1.88
BRPF3Q9ULD4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
BRPF3Q9ULD4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
BRPF3Q9ULD4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
BRPF3Q9ULD4 SNORA75.5-201ENST00000391291 81 ntBASIC3.28□□□□□ -1.88
BRPF3Q9ULD4 AC233266.1-201ENST00000454518 96 ntBASIC3.28□□□□□ -1.88
BRPF3Q9ULD4 AC092991.1-201ENST00000477176 376 ntBASIC3.28□□□□□ -1.88
BRPF3Q9ULD4 RN7SL636P-201ENST00000497504 294 ntBASIC3.28□□□□□ -1.88
BRPF3Q9ULD4 YWHAEP4-201ENST00000505390 198 ntBASIC3.28□□□□□ -1.88
BRPF3Q9ULD4 RNU6-479P-201ENST00000516348 105 ntBASIC3.28□□□□□ -1.88
BRPF3Q9ULD4 RNA5SP402-201ENST00000517148 110 ntBASIC3.28□□□□□ -1.88
BRPF3Q9ULD4 AL160236.1-201ENST00000556317 195 ntBASIC3.28□□□□□ -1.88
BRPF3Q9ULD4 AC026271.5-201ENST00000577873 130 ntBASIC3.28□□□□□ -1.88
BRPF3Q9ULD4 AC120024.3-201ENST00000603167 156 ntBASIC3.28□□□□□ -1.88
BRPF3Q9ULD4 AC242852.1-201ENST00000612151 96 ntBASIC3.28□□□□□ -1.88
BRPF3Q9ULD4 JPX_2.1-201ENST00000614161 69 ntBASIC3.28□□□□□ -1.88
BRPF3Q9ULD4 AC244015.1-201ENST00000622301 99 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms