Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
VTI1BQ9UEU0 AC245047.4-201ENST00000433189 144 ntBASIC2.92□□□□□ -1.94
VTI1BQ9UEU0 RPS29P6-201ENST00000438196 145 ntBASIC2.92□□□□□ -1.94
VTI1BQ9UEU0 AC069257.2-201ENST00000441819 155 ntBASIC2.92□□□□□ -1.94
VTI1BQ9UEU0 RNU6-1299P-201ENST00000516316 100 ntBASIC2.92□□□□□ -1.94
VTI1BQ9UEU0 RN7SKP57-201ENST00000517248 293 ntBASIC2.92□□□□□ -1.94
VTI1BQ9UEU0 AC084364.2-201ENST00000546924 395 ntBASIC2.92□□□□□ -1.94
VTI1BQ9UEU0 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.92□□□□□ -1.94
VTI1BQ9UEU0 DNAJC19P2-201ENST00000593340 302 ntBASIC2.92□□□□□ -1.94
VTI1BQ9UEU0 Y_RNA.778-201ENST00000620203 90 ntBASIC2.92□□□□□ -1.94
VTI1BQ9UEU0 AC007318.2-201ENST00000620999 243 ntBASIC2.92□□□□□ -1.94
VTI1BQ9UEU0 CTSLP2-204ENST00000629029 392 ntBASIC2.92□□□□□ -1.94
VTI1BQ9UEU0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
VTI1BQ9UEU0 Z82195.2-201ENST00000612348 18351 ntBASIC2.91□□□□□ -1.94
VTI1BQ9UEU0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
VTI1BQ9UEU0 SNORA3A-201ENST00000364113 130 ntBASIC2.91□□□□□ -1.94
VTI1BQ9UEU0 RNU6-1138P-201ENST00000365359 106 ntBASIC2.91□□□□□ -1.94
VTI1BQ9UEU0 Y_RNA.400-201ENST00000383963 111 ntBASIC2.91□□□□□ -1.94
VTI1BQ9UEU0 MIR181B1-201ENST00000385240 110 ntBASIC2.91□□□□□ -1.94
VTI1BQ9UEU0 SNORD67-201ENST00000390833 111 ntBASIC2.91□□□□□ -1.94
VTI1BQ9UEU0 RNA5SP109-201ENST00000391010 116 ntBASIC2.91□□□□□ -1.94
VTI1BQ9UEU0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.91□□□□□ -1.94
VTI1BQ9UEU0 NDUFA4P2-201ENST00000489989 244 ntBASIC2.91□□□□□ -1.94
VTI1BQ9UEU0 OR9P1P-201ENST00000496431 281 ntBASIC2.91□□□□□ -1.94
VTI1BQ9UEU0 RNU6-197P-201ENST00000516680 100 ntBASIC2.91□□□□□ -1.94
VTI1BQ9UEU0 SNORA70.24-201ENST00000517233 118 ntBASIC2.91□□□□□ -1.94
VTI1BQ9UEU0 AL160236.1-201ENST00000556317 195 ntBASIC2.91□□□□□ -1.94
VTI1BQ9UEU0 AL591926.4-201ENST00000616895 298 ntBASIC2.91□□□□□ -1.94
VTI1BQ9UEU0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
VTI1BQ9UEU0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.91□□□□□ -1.94
VTI1BQ9UEU0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
VTI1BQ9UEU0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.91□□□□□ -1.94
VTI1BQ9UEU0 MIR126-201ENST00000362291 85 ntBASIC2.9□□□□□ -1.95
VTI1BQ9UEU0 RNA5SP374-201ENST00000362939 125 ntBASIC2.9□□□□□ -1.95
VTI1BQ9UEU0 SNORA48.1-201ENST00000390879 135 ntBASIC2.9□□□□□ -1.95
VTI1BQ9UEU0 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.9□□□□□ -1.95
VTI1BQ9UEU0 RNU6-126P-201ENST00000516685 103 ntBASIC2.9□□□□□ -1.95
VTI1BQ9UEU0 RNU7-149P-201ENST00000516739 59 ntBASIC2.9□□□□□ -1.95
VTI1BQ9UEU0 MIR4662B-201ENST00000579498 81 ntBASIC2.9□□□□□ -1.95
VTI1BQ9UEU0 AC006023.1-201ENST00000603944 259 ntBASIC2.9□□□□□ -1.95
VTI1BQ9UEU0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VTI1BQ9UEU0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
VTI1BQ9UEU0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
VTI1BQ9UEU0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
VTI1BQ9UEU0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
VTI1BQ9UEU0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VTI1BQ9UEU0 RNU1-35P-201ENST00000362782 153 ntBASIC2.89□□□□□ -1.95
VTI1BQ9UEU0 RNU6-151P-201ENST00000364158 107 ntBASIC2.89□□□□□ -1.95
VTI1BQ9UEU0 SNORA9-201ENST00000384215 133 ntBASIC2.89□□□□□ -1.95
VTI1BQ9UEU0 AL590004.2-201ENST00000404787 371 ntBASIC2.89□□□□□ -1.95
VTI1BQ9UEU0 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.89□□□□□ -1.95
VTI1BQ9UEU0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.89□□□□□ -1.95
VTI1BQ9UEU0 RNVU1-2-201ENST00000516326 135 ntBASIC2.89□□□□□ -1.95
VTI1BQ9UEU0 RNU6-406P-201ENST00000516470 107 ntBASIC2.89□□□□□ -1.95
VTI1BQ9UEU0 RNA5SP153-201ENST00000516498 76 ntBASIC2.89□□□□□ -1.95
VTI1BQ9UEU0 SNORD116-25-201ENST00000516517 92 ntBASIC2.89□□□□□ -1.95
VTI1BQ9UEU0 AC087685.1-201ENST00000587507 141 ntBASIC2.89□□□□□ -1.95
VTI1BQ9UEU0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.89□□□□□ -1.95
VTI1BQ9UEU0 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.89□□□□□ -1.95
VTI1BQ9UEU0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VTI1BQ9UEU0 MIR22-201ENST00000362190 85 ntBASIC2.88□□□□□ -1.95
VTI1BQ9UEU0 MIR613-201ENST00000385248 95 ntBASIC2.88□□□□□ -1.95
VTI1BQ9UEU0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
VTI1BQ9UEU0 SNORA12.1-201ENST00000390873 148 ntBASIC2.88□□□□□ -1.95
VTI1BQ9UEU0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.88□□□□□ -1.95
VTI1BQ9UEU0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.88□□□□□ -1.95
VTI1BQ9UEU0 Y_RNA.714-201ENST00000517065 90 ntBASIC2.88□□□□□ -1.95
VTI1BQ9UEU0 RNU6-789P-201ENST00000517105 102 ntBASIC2.88□□□□□ -1.95
VTI1BQ9UEU0 SNORA31.25-201ENST00000517242 134 ntBASIC2.88□□□□□ -1.95
VTI1BQ9UEU0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.88□□□□□ -1.95
VTI1BQ9UEU0 AL161756.2-201ENST00000604597 246 ntBASIC2.88□□□□□ -1.95
VTI1BQ9UEU0 MIR3658-201ENST00000636291 56 ntBASIC2.88□□□□□ -1.95
VTI1BQ9UEU0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
VTI1BQ9UEU0 AC007336.1-201ENST00000576365 3828 ntBASIC2.87□□□□□ -1.95
VTI1BQ9UEU0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VTI1BQ9UEU0 SNORA63D-201ENST00000364359 132 ntBASIC2.87□□□□□ -1.95
VTI1BQ9UEU0 SNORD50.2-201ENST00000365465 70 ntBASIC2.87□□□□□ -1.95
VTI1BQ9UEU0 MIR491-201ENST00000384877 84 ntBASIC2.87□□□□□ -1.95
VTI1BQ9UEU0 MIR522-201ENST00000385071 87 ntBASIC2.87□□□□□ -1.95
VTI1BQ9UEU0 SNORA11.1-201ENST00000408133 129 ntBASIC2.87□□□□□ -1.95
VTI1BQ9UEU0 AC007064.1-201ENST00000412238 351 ntBASIC2.87□□□□□ -1.95
VTI1BQ9UEU0 AC008885.1-201ENST00000514930 301 ntBASIC2.87□□□□□ -1.95
VTI1BQ9UEU0 RNA5SP76-201ENST00000516277 87 ntBASIC2.87□□□□□ -1.95
VTI1BQ9UEU0 RNU7-28P-201ENST00000516759 62 ntBASIC2.87□□□□□ -1.95
VTI1BQ9UEU0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.87□□□□□ -1.95
VTI1BQ9UEU0 AC097639.2-201ENST00000603159 172 ntBASIC2.87□□□□□ -1.95
VTI1BQ9UEU0 Pinc.1-201ENST00000616452 154 ntBASIC2.87□□□□□ -1.95
VTI1BQ9UEU0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VTI1BQ9UEU0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
VTI1BQ9UEU0 MIR422A-201ENST00000362286 90 ntBASIC2.86□□□□□ -1.95
VTI1BQ9UEU0 Y_RNA.215-201ENST00000364204 112 ntBASIC2.86□□□□□ -1.95
VTI1BQ9UEU0 Y_RNA.393-201ENST00000383936 102 ntBASIC2.86□□□□□ -1.95
VTI1BQ9UEU0 Y_RNA.521-201ENST00000384560 114 ntBASIC2.86□□□□□ -1.95
VTI1BQ9UEU0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
VTI1BQ9UEU0 RNU6-131P-201ENST00000391144 107 ntBASIC2.86□□□□□ -1.95
VTI1BQ9UEU0 RNA5SP482-201ENST00000391269 118 ntBASIC2.86□□□□□ -1.95
VTI1BQ9UEU0 SNORA26-201ENST00000391286 122 ntBASIC2.86□□□□□ -1.95
VTI1BQ9UEU0 RNU2-70P-201ENST00000410718 179 ntBASIC2.86□□□□□ -1.95
VTI1BQ9UEU0 RNA5SP501-201ENST00000410990 112 ntBASIC2.86□□□□□ -1.95
VTI1BQ9UEU0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms