Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RNU6-1178P-201ENST00000516674 107 ntBASIC-1.2□□□□□ -2.6
CHD7Q9P2D1 MIR4423-201ENST00000580922 80 ntBASIC-1.2□□□□□ -2.6
CHD7Q9P2D1 AC110760.3-201ENST00000598794 467 ntBASIC-1.2□□□□□ -2.6
CHD7Q9P2D1 AL161798.1-201ENST00000604630 131 ntBASIC-1.2□□□□□ -2.6
CHD7Q9P2D1 AL139418.1-201ENST00000613613 177 ntBASIC-1.2□□□□□ -2.6
CHD7Q9P2D1 SNORD115-25-201ENST00000362619 82 ntBASIC-1.2□□□□□ -2.6
CHD7Q9P2D1 Y_RNA.287-201ENST00000364853 94 ntBASIC-1.2□□□□□ -2.6
CHD7Q9P2D1 Y_RNA.302-201ENST00000364997 102 ntBASIC-1.2□□□□□ -2.6
CHD7Q9P2D1 SNORD115-35-201ENST00000365122 82 ntBASIC-1.2□□□□□ -2.6
CHD7Q9P2D1 RNU6-658P-201ENST00000384606 106 ntBASIC-1.2□□□□□ -2.6
CHD7Q9P2D1 RNU6-932P-201ENST00000391108 106 ntBASIC-1.2□□□□□ -2.6
CHD7Q9P2D1 RPL7P42-201ENST00000481005 679 ntBASIC-1.2□□□□□ -2.6
CHD7Q9P2D1 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-1.2□□□□□ -2.6
CHD7Q9P2D1 SNORA28-201ENST00000606769 126 ntBASIC-1.2□□□□□ -2.6
CHD7Q9P2D1 AL590396.2-201ENST00000636511 1041 ntBASIC-1.2□□□□□ -2.6
CHD7Q9P2D1 RNU6-230P-201ENST00000362457 104 ntBASIC-1.21□□□□□ -2.6
CHD7Q9P2D1 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.21□□□□□ -2.6
CHD7Q9P2D1 Y_RNA.62-201ENST00000362840 99 ntBASIC-1.21□□□□□ -2.6
CHD7Q9P2D1 RNU6-188P-201ENST00000364207 107 ntBASIC-1.21□□□□□ -2.6
CHD7Q9P2D1 RNU6-424P-201ENST00000384367 105 ntBASIC-1.21□□□□□ -2.6
CHD7Q9P2D1 MIR10A-201ENST00000385043 110 ntBASIC-1.21□□□□□ -2.6
CHD7Q9P2D1 MTND3P17-201ENST00000416968 344 ntBASIC-1.21□□□□□ -2.6
CHD7Q9P2D1 BTF3P15-201ENST00000455606 336 ntBASIC-1.21□□□□□ -2.6
CHD7Q9P2D1 RNU6-1146P-201ENST00000516282 102 ntBASIC-1.21□□□□□ -2.6
CHD7Q9P2D1 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-1.21□□□□□ -2.6
CHD7Q9P2D1 AL512347.1-201ENST00000566420 503 ntBASIC-1.21□□□□□ -2.6
CHD7Q9P2D1 AP001033.2-201ENST00000609701 1003 ntBASIC-1.21□□□□□ -2.6
CHD7Q9P2D1 AL159153.1-201ENST00000619688 317 ntBASIC-1.21□□□□□ -2.6
CHD7Q9P2D1 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.21□□□□□ -2.6
CHD7Q9P2D1 SNORD14.1-201ENST00000365609 90 ntBASIC-1.21□□□□□ -2.6
CHD7Q9P2D1 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.21□□□□□ -2.6
CHD7Q9P2D1 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.21□□□□□ -2.6
CHD7Q9P2D1 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.21□□□□□ -2.6
CHD7Q9P2D1 AC010153.1-201ENST00000432862 727 ntBASIC-1.21□□□□□ -2.6
CHD7Q9P2D1 RNU2-11P-201ENST00000459191 187 ntBASIC-1.21□□□□□ -2.6
CHD7Q9P2D1 AC025459.1-201ENST00000504072 156 ntBASIC-1.21□□□□□ -2.6
CHD7Q9P2D1 RNU6-948P-201ENST00000516374 107 ntBASIC-1.21□□□□□ -2.6
CHD7Q9P2D1 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-1.21□□□□□ -2.6
CHD7Q9P2D1 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-1.21□□□□□ -2.6
CHD7Q9P2D1 MIR8066-201ENST00000617280 78 ntBASIC-1.21□□□□□ -2.6
CHD7Q9P2D1 SNORD116-20-201ENST00000384529 92 ntBASIC-1.22□□□□□ -2.6
CHD7Q9P2D1 MIR19A-201ENST00000384878 82 ntBASIC-1.22□□□□□ -2.6
CHD7Q9P2D1 MIR516B2-201ENST00000385190 85 ntBASIC-1.22□□□□□ -2.6
CHD7Q9P2D1 SNORD41.1-201ENST00000391000 69 ntBASIC-1.22□□□□□ -2.6
CHD7Q9P2D1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.22□□□□□ -2.6
CHD7Q9P2D1 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC-1.22□□□□□ -2.6
CHD7Q9P2D1 RPL17P51-201ENST00000605218 238 ntBASIC-1.22□□□□□ -2.6
CHD7Q9P2D1 AC027279.3-201ENST00000625055 122 ntBASIC-1.22□□□□□ -2.6
CHD7Q9P2D1 RNU6-164P-201ENST00000364604 103 ntBASIC-1.22□□□□□ -2.6
CHD7Q9P2D1 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC-1.22□□□□□ -2.6
CHD7Q9P2D1 AL353813.1-201ENST00000440700 253 ntBASIC-1.22□□□□□ -2.6
CHD7Q9P2D1 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.22□□□□□ -2.6
CHD7Q9P2D1 RNU6-856P-201ENST00000516959 98 ntBASIC-1.22□□□□□ -2.6
CHD7Q9P2D1 AC022306.2-201ENST00000617563 647 ntBASIC-1.22□□□□□ -2.6
CHD7Q9P2D1 RNU6-179P-201ENST00000363350 107 ntBASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 RNU6-487P-201ENST00000365430 104 ntBASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 MIR487B-201ENST00000385021 84 ntBASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 RPS3AP3-201ENST00000411933 242 ntBASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 RNU6-1069P-201ENST00000516612 133 ntBASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 MIR8068-201ENST00000618032 68 ntBASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 AC126544.2-201ENST00000625174 749 ntBASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 RNU6-484P-201ENST00000384016 107 ntBASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 MIR181B2-201ENST00000385004 89 ntBASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 MIR549A-201ENST00000385268 96 ntBASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 SNORD93-201ENST00000408813 74 ntBASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 AC018714.1-201ENST00000605028 208 ntBASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 AC079781.2-201ENST00000446424 169 ntBASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 MTATP6P14-201ENST00000455189 673 ntBASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 RNU6-175P-201ENST00000516896 107 ntBASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 POLR3GP1-201ENST00000594073 261 ntBASIC-1.23□□□□□ -2.61
CHD7Q9P2D1 AC114491.1-201ENST00000416095 246 ntBASIC-1.24□□□□□ -2.61
CHD7Q9P2D1 AC112206.4-201ENST00000515142 405 ntBASIC-1.24□□□□□ -2.61
CHD7Q9P2D1 RNU6-703P-201ENST00000516946 107 ntBASIC-1.24□□□□□ -2.61
CHD7Q9P2D1 AL158042.1-201ENST00000605338 460 ntBASIC-1.24□□□□□ -2.61
CHD7Q9P2D1 SNORD115-40-201ENST00000606510 82 ntBASIC-1.24□□□□□ -2.61
CHD7Q9P2D1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-1.24□□□□□ -2.61
CHD7Q9P2D1 RNU6-1186P-201ENST00000410429 97 ntBASIC-1.24□□□□□ -2.61
CHD7Q9P2D1 MTCYBP8-201ENST00000422855 651 ntBASIC-1.24□□□□□ -2.61
CHD7Q9P2D1 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.24□□□□□ -2.61
CHD7Q9P2D1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-1.24□□□□□ -2.61
CHD7Q9P2D1 SNORD115-26-201ENST00000365067 82 ntBASIC-1.25□□□□□ -2.61
CHD7Q9P2D1 RNU6-354P-201ENST00000383862 107 ntBASIC-1.25□□□□□ -2.61
CHD7Q9P2D1 RNU6-610P-201ENST00000384264 107 ntBASIC-1.25□□□□□ -2.61
CHD7Q9P2D1 SNORA40C-201ENST00000391285 128 ntBASIC-1.25□□□□□ -2.61
CHD7Q9P2D1 MTATP6P20-201ENST00000414147 562 ntBASIC-1.25□□□□□ -2.61
CHD7Q9P2D1 CCDC58P2-201ENST00000417131 366 ntBASIC-1.25□□□□□ -2.61
CHD7Q9P2D1 AC008134.1-201ENST00000420943 193 ntBASIC-1.25□□□□□ -2.61
CHD7Q9P2D1 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms