Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 AC068647.2-201ENST00000637380 353 ntBASIC2.43□□□□□ -2.02
CALCOCO1Q9P1Z2 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CALCOCO1Q9P1Z2 Y_RNA.199-201ENST00000364014 102 ntBASIC2.42□□□□□ -2.02
CALCOCO1Q9P1Z2 Y_RNA.200-201ENST00000364018 102 ntBASIC2.42□□□□□ -2.02
CALCOCO1Q9P1Z2 SNORA72.4-201ENST00000384174 132 ntBASIC2.42□□□□□ -2.02
CALCOCO1Q9P1Z2 RNU11-3P-201ENST00000391111 133 ntBASIC2.42□□□□□ -2.02
CALCOCO1Q9P1Z2 AL353689.1-201ENST00000438895 199 ntBASIC2.42□□□□□ -2.02
CALCOCO1Q9P1Z2 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.42□□□□□ -2.02
CALCOCO1Q9P1Z2 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.42□□□□□ -2.02
CALCOCO1Q9P1Z2 RNU6-237P-201ENST00000515985 71 ntBASIC2.42□□□□□ -2.02
CALCOCO1Q9P1Z2 RNA5SP137-201ENST00000516833 135 ntBASIC2.42□□□□□ -2.02
CALCOCO1Q9P1Z2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CALCOCO1Q9P1Z2 AC130289.1-201ENST00000577321 73 ntBASIC2.42□□□□□ -2.02
CALCOCO1Q9P1Z2 MIR3169-201ENST00000578032 83 ntBASIC2.42□□□□□ -2.02
CALCOCO1Q9P1Z2 MIR4524B-201ENST00000581569 115 ntBASIC2.42□□□□□ -2.02
CALCOCO1Q9P1Z2 MIR4282-201ENST00000583613 67 ntBASIC2.42□□□□□ -2.02
CALCOCO1Q9P1Z2 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.42□□□□□ -2.02
CALCOCO1Q9P1Z2 AL008718.3-201ENST00000610217 321 ntBASIC2.42□□□□□ -2.02
CALCOCO1Q9P1Z2 U6.73-201ENST00000619194 103 ntBASIC2.42□□□□□ -2.02
CALCOCO1Q9P1Z2 MIR338-201ENST00000636369 67 ntBASIC2.42□□□□□ -2.02
CALCOCO1Q9P1Z2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CALCOCO1Q9P1Z2 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CALCOCO1Q9P1Z2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CALCOCO1Q9P1Z2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CALCOCO1Q9P1Z2 RNU1-58P-201ENST00000362413 163 ntBASIC2.41□□□□□ -2.02
CALCOCO1Q9P1Z2 RNU6-862P-201ENST00000362804 105 ntBASIC2.41□□□□□ -2.02
CALCOCO1Q9P1Z2 RNU1-22P-201ENST00000363334 158 ntBASIC2.41□□□□□ -2.02
CALCOCO1Q9P1Z2 RNU4-13P-201ENST00000364019 141 ntBASIC2.41□□□□□ -2.02
CALCOCO1Q9P1Z2 RNY1-201ENST00000364228 113 ntBASIC2.41□□□□□ -2.02
CALCOCO1Q9P1Z2 RNU6-376P-201ENST00000384731 106 ntBASIC2.41□□□□□ -2.02
CALCOCO1Q9P1Z2 RNA5SP323-201ENST00000391094 133 ntBASIC2.41□□□□□ -2.02
CALCOCO1Q9P1Z2 RNA5SP467-201ENST00000391274 118 ntBASIC2.41□□□□□ -2.02
CALCOCO1Q9P1Z2 RNA5SP270-201ENST00000411361 118 ntBASIC2.41□□□□□ -2.02
CALCOCO1Q9P1Z2 MTND5P15-201ENST00000434246 349 ntBASIC2.41□□□□□ -2.02
CALCOCO1Q9P1Z2 AC097462.1-201ENST00000514125 324 ntBASIC2.41□□□□□ -2.02
CALCOCO1Q9P1Z2 RNU6-1278P-201ENST00000516130 107 ntBASIC2.41□□□□□ -2.02
CALCOCO1Q9P1Z2 RNU1-40P-201ENST00000516816 164 ntBASIC2.41□□□□□ -2.02
CALCOCO1Q9P1Z2 RNU1-97P-201ENST00000516872 164 ntBASIC2.41□□□□□ -2.02
CALCOCO1Q9P1Z2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.41□□□□□ -2.02
CALCOCO1Q9P1Z2 MIR1273D-201ENST00000577266 86 ntBASIC2.41□□□□□ -2.02
CALCOCO1Q9P1Z2 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.41□□□□□ -2.02
CALCOCO1Q9P1Z2 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.41□□□□□ -2.02
CALCOCO1Q9P1Z2 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.41□□□□□ -2.02
CALCOCO1Q9P1Z2 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CALCOCO1Q9P1Z2 Y_RNA.83-201ENST00000363005 113 ntBASIC2.4□□□□□ -2.03
CALCOCO1Q9P1Z2 RNU6-200P-201ENST00000364743 107 ntBASIC2.4□□□□□ -2.03
CALCOCO1Q9P1Z2 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.4□□□□□ -2.03
CALCOCO1Q9P1Z2 RNU6-907P-201ENST00000390924 102 ntBASIC2.4□□□□□ -2.03
CALCOCO1Q9P1Z2 RNA5SP511-201ENST00000410487 115 ntBASIC2.4□□□□□ -2.03
CALCOCO1Q9P1Z2 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CALCOCO1Q9P1Z2 SNORD2.1-201ENST00000458762 69 ntBASIC2.4□□□□□ -2.03
CALCOCO1Q9P1Z2 AC117454.1-201ENST00000491120 168 ntBASIC2.4□□□□□ -2.03
CALCOCO1Q9P1Z2 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.4□□□□□ -2.03
CALCOCO1Q9P1Z2 RNU6-138P-201ENST00000515952 107 ntBASIC2.4□□□□□ -2.03
CALCOCO1Q9P1Z2 RNU7-193P-201ENST00000516723 65 ntBASIC2.4□□□□□ -2.03
CALCOCO1Q9P1Z2 MIR5007-201ENST00000583098 95 ntBASIC2.4□□□□□ -2.03
CALCOCO1Q9P1Z2 MIR4769-201ENST00000584126 77 ntBASIC2.4□□□□□ -2.03
CALCOCO1Q9P1Z2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.39□□□□□ -2.03
CALCOCO1Q9P1Z2 SNORA16B-201ENST00000364674 135 ntBASIC2.39□□□□□ -2.03
CALCOCO1Q9P1Z2 Y_RNA.293-201ENST00000364908 93 ntBASIC2.39□□□□□ -2.03
CALCOCO1Q9P1Z2 Y_RNA.297-201ENST00000364950 91 ntBASIC2.39□□□□□ -2.03
CALCOCO1Q9P1Z2 RNY4P28-201ENST00000365281 93 ntBASIC2.39□□□□□ -2.03
CALCOCO1Q9P1Z2 Y_RNA.626-201ENST00000411288 95 ntBASIC2.39□□□□□ -2.03
CALCOCO1Q9P1Z2 AL139156.1-201ENST00000412785 841 ntBASIC2.39□□□□□ -2.03
CALCOCO1Q9P1Z2 EBAG9P1-201ENST00000418955 543 ntBASIC2.39□□□□□ -2.03
CALCOCO1Q9P1Z2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.39□□□□□ -2.03
CALCOCO1Q9P1Z2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.39□□□□□ -2.03
CALCOCO1Q9P1Z2 RNU7-141P-201ENST00000459304 62 ntBASIC2.39□□□□□ -2.03
CALCOCO1Q9P1Z2 MIR5692C2-201ENST00000577959 77 ntBASIC2.39□□□□□ -2.03
CALCOCO1Q9P1Z2 MIR3935-201ENST00000583472 104 ntBASIC2.39□□□□□ -2.03
CALCOCO1Q9P1Z2 AC007229.1-201ENST00000590455 412 ntBASIC2.39□□□□□ -2.03
CALCOCO1Q9P1Z2 AC005972.2-201ENST00000604690 348 ntBASIC2.39□□□□□ -2.03
CALCOCO1Q9P1Z2 AC004832.4-201ENST00000608952 331 ntBASIC2.39□□□□□ -2.03
CALCOCO1Q9P1Z2 AL359075.3-201ENST00000613288 217 ntBASIC2.39□□□□□ -2.03
CALCOCO1Q9P1Z2 AL078604.3-201ENST00000615580 211 ntBASIC2.39□□□□□ -2.03
CALCOCO1Q9P1Z2 RNU6-899P-201ENST00000363947 107 ntBASIC2.38□□□□□ -2.03
CALCOCO1Q9P1Z2 RNU1-96P-201ENST00000364163 162 ntBASIC2.38□□□□□ -2.03
CALCOCO1Q9P1Z2 Y_RNA.274-201ENST00000364714 101 ntBASIC2.38□□□□□ -2.03
CALCOCO1Q9P1Z2 U8.7-201ENST00000364940 136 ntBASIC2.38□□□□□ -2.03
CALCOCO1Q9P1Z2 MIR597-201ENST00000384968 97 ntBASIC2.38□□□□□ -2.03
CALCOCO1Q9P1Z2 SNORA40.19-201ENST00000390846 128 ntBASIC2.38□□□□□ -2.03
CALCOCO1Q9P1Z2 AC104332.1-201ENST00000440471 797 ntBASIC2.38□□□□□ -2.03
CALCOCO1Q9P1Z2 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.38□□□□□ -2.03
CALCOCO1Q9P1Z2 RNU1-142P-201ENST00000516682 145 ntBASIC2.38□□□□□ -2.03
CALCOCO1Q9P1Z2 AC073413.2-201ENST00000604332 360 ntBASIC2.38□□□□□ -2.03
CALCOCO1Q9P1Z2 AL353149.1-201ENST00000610667 244 ntBASIC2.38□□□□□ -2.03
CALCOCO1Q9P1Z2 AC013791.1-201ENST00000616619 62 ntBASIC2.38□□□□□ -2.03
CALCOCO1Q9P1Z2 MIR6766-201ENST00000622641 72 ntBASIC2.38□□□□□ -2.03
CALCOCO1Q9P1Z2 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.38□□□□□ -2.03
CALCOCO1Q9P1Z2 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CALCOCO1Q9P1Z2 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.37□□□□□ -2.03
CALCOCO1Q9P1Z2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CALCOCO1Q9P1Z2 SNORA33-201ENST00000363664 130 ntBASIC2.37□□□□□ -2.03
CALCOCO1Q9P1Z2 RNU6-117P-201ENST00000365415 107 ntBASIC2.37□□□□□ -2.03
CALCOCO1Q9P1Z2 MIR518A2-201ENST00000384966 87 ntBASIC2.37□□□□□ -2.03
CALCOCO1Q9P1Z2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CALCOCO1Q9P1Z2 AC025033.1-201ENST00000463883 194 ntBASIC2.37□□□□□ -2.03
CALCOCO1Q9P1Z2 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.37□□□□□ -2.03
CALCOCO1Q9P1Z2 RNY3P16-201ENST00000516338 101 ntBASIC2.37□□□□□ -2.03
CALCOCO1Q9P1Z2 AC024405.2-202ENST00000532731 184 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms