Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AC024067.1-201ENST00000426199 223 ntBASIC2.15□□□□□ -2.07
NCKIPSDQ9NZQ3 AL591806.2-201ENST00000433122 173 ntBASIC2.15□□□□□ -2.07
NCKIPSDQ9NZQ3 MTCO1P44-201ENST00000441935 243 ntBASIC2.15□□□□□ -2.07
NCKIPSDQ9NZQ3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.15□□□□□ -2.07
NCKIPSDQ9NZQ3 Y_RNA.641-201ENST00000459414 105 ntBASIC2.15□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU6-221P-201ENST00000459541 99 ntBASIC2.15□□□□□ -2.07
NCKIPSDQ9NZQ3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.15□□□□□ -2.07
NCKIPSDQ9NZQ3 AC107393.1-201ENST00000512403 346 ntBASIC2.15□□□□□ -2.07
NCKIPSDQ9NZQ3 SNORD116-28-201ENST00000516123 91 ntBASIC2.15□□□□□ -2.07
NCKIPSDQ9NZQ3 AC015712.3-201ENST00000559380 164 ntBASIC2.15□□□□□ -2.07
NCKIPSDQ9NZQ3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.15□□□□□ -2.07
NCKIPSDQ9NZQ3 AC012640.5-201ENST00000623897 319 ntBASIC2.15□□□□□ -2.07
NCKIPSDQ9NZQ3 snoZ196.1-201ENST00000625269 89 ntBASIC2.15□□□□□ -2.07
NCKIPSDQ9NZQ3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.15□□□□□ -2.07
NCKIPSDQ9NZQ3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU1-58P-201ENST00000362413 163 ntBASIC2.14□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU6-1164P-201ENST00000364428 107 ntBASIC2.14□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU6-746P-201ENST00000384112 109 ntBASIC2.14□□□□□ -2.07
NCKIPSDQ9NZQ3 MIR1289-2-201ENST00000408360 111 ntBASIC2.14□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU6-57P-201ENST00000411348 103 ntBASIC2.14□□□□□ -2.07
NCKIPSDQ9NZQ3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
NCKIPSDQ9NZQ3 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.14□□□□□ -2.07
NCKIPSDQ9NZQ3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.14□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU6-789P-201ENST00000517105 102 ntBASIC2.14□□□□□ -2.07
NCKIPSDQ9NZQ3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
NCKIPSDQ9NZQ3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
NCKIPSDQ9NZQ3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
NCKIPSDQ9NZQ3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU6-682P-201ENST00000363843 106 ntBASIC2.13□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU6-324P-201ENST00000363957 106 ntBASIC2.13□□□□□ -2.07
NCKIPSDQ9NZQ3 Y_RNA.262-201ENST00000364641 102 ntBASIC2.13□□□□□ -2.07
NCKIPSDQ9NZQ3 Y_RNA.435-201ENST00000384095 112 ntBASIC2.13□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU6-1235P-201ENST00000384559 107 ntBASIC2.13□□□□□ -2.07
NCKIPSDQ9NZQ3 COX6CP10-201ENST00000416832 224 ntBASIC2.13□□□□□ -2.07
NCKIPSDQ9NZQ3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.13□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU6-498P-201ENST00000459468 107 ntBASIC2.13□□□□□ -2.07
NCKIPSDQ9NZQ3 AC025033.1-201ENST00000463883 194 ntBASIC2.13□□□□□ -2.07
NCKIPSDQ9NZQ3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.13□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU6-948P-201ENST00000516374 107 ntBASIC2.13□□□□□ -2.07
NCKIPSDQ9NZQ3 AC007229.1-201ENST00000590455 412 ntBASIC2.13□□□□□ -2.07
NCKIPSDQ9NZQ3 AC078899.2-201ENST00000595282 212 ntBASIC2.13□□□□□ -2.07
NCKIPSDQ9NZQ3 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.13□□□□□ -2.07
NCKIPSDQ9NZQ3 U6.106-201ENST00000636360 105 ntBASIC2.13□□□□□ -2.07
NCKIPSDQ9NZQ3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
NCKIPSDQ9NZQ3 Y_RNA.172-201ENST00000363765 102 ntBASIC2.12□□□□□ -2.07
NCKIPSDQ9NZQ3 SNORD114-6-201ENST00000364393 72 ntBASIC2.12□□□□□ -2.07
NCKIPSDQ9NZQ3 SNORA64-201ENST00000384674 134 ntBASIC2.12□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.12□□□□□ -2.07
NCKIPSDQ9NZQ3 AL357134.1-201ENST00000445848 426 ntBASIC2.12□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU6-717P-201ENST00000459076 104 ntBASIC2.12□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU6-406P-201ENST00000516470 107 ntBASIC2.12□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU1-40P-201ENST00000516816 164 ntBASIC2.12□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU1-97P-201ENST00000516872 164 ntBASIC2.12□□□□□ -2.07
NCKIPSDQ9NZQ3 AC025647.1-201ENST00000517879 253 ntBASIC2.12□□□□□ -2.07
NCKIPSDQ9NZQ3 AC087441.2-201ENST00000529141 262 ntBASIC2.12□□□□□ -2.07
NCKIPSDQ9NZQ3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NCKIPSDQ9NZQ3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.12□□□□□ -2.07
NCKIPSDQ9NZQ3 MIR5002-201ENST00000584713 97 ntBASIC2.12□□□□□ -2.07
NCKIPSDQ9NZQ3 AC002984.1-201ENST00000591692 448 ntBASIC2.12□□□□□ -2.07
NCKIPSDQ9NZQ3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.12□□□□□ -2.07
NCKIPSDQ9NZQ3 AC068700.1-201ENST00000565862 3754 ntBASIC2.12□□□□□ -2.07
NCKIPSDQ9NZQ3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
NCKIPSDQ9NZQ3 RNA5SP493-201ENST00000364115 91 ntBASIC2.11□□□□□ -2.07
NCKIPSDQ9NZQ3 Y_RNA.304-201ENST00000365011 112 ntBASIC2.11□□□□□ -2.07
NCKIPSDQ9NZQ3 RNA5SP138-201ENST00000365098 114 ntBASIC2.11□□□□□ -2.07
NCKIPSDQ9NZQ3 SNORA20B-201ENST00000384220 132 ntBASIC2.11□□□□□ -2.07
NCKIPSDQ9NZQ3 MIR597-201ENST00000384968 97 ntBASIC2.11□□□□□ -2.07
NCKIPSDQ9NZQ3 RNA5SP465-201ENST00000391195 109 ntBASIC2.11□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU1-131P-201ENST00000458943 161 ntBASIC2.11□□□□□ -2.07
NCKIPSDQ9NZQ3 SNORD65B-201ENST00000459126 73 ntBASIC2.11□□□□□ -2.07
NCKIPSDQ9NZQ3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.11□□□□□ -2.07
NCKIPSDQ9NZQ3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NCKIPSDQ9NZQ3 Y_RNA.662-201ENST00000516028 97 ntBASIC2.11□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU2-34P-201ENST00000516534 121 ntBASIC2.11□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU6-861P-201ENST00000516745 106 ntBASIC2.11□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU2-19P-201ENST00000517288 84 ntBASIC2.11□□□□□ -2.07
NCKIPSDQ9NZQ3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.11□□□□□ -2.07
NCKIPSDQ9NZQ3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.11□□□□□ -2.07
NCKIPSDQ9NZQ3 MIR5692C2-201ENST00000577959 77 ntBASIC2.11□□□□□ -2.07
NCKIPSDQ9NZQ3 AL008718.3-201ENST00000610217 321 ntBASIC2.11□□□□□ -2.07
NCKIPSDQ9NZQ3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NCKIPSDQ9NZQ3 AL159152.1-201ENST00000635019 2587 ntBASIC2.1□□□□□ -2.07
NCKIPSDQ9NZQ3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.1□□□□□ -2.07
NCKIPSDQ9NZQ3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.1□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU6-1272P-201ENST00000362776 107 ntBASIC2.1□□□□□ -2.07
NCKIPSDQ9NZQ3 Y_RNA.233-201ENST00000364407 101 ntBASIC2.1□□□□□ -2.07
NCKIPSDQ9NZQ3 Y_RNA.240-201ENST00000364469 95 ntBASIC2.1□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU6-47P-201ENST00000383866 107 ntBASIC2.1□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU6-918P-201ENST00000391219 106 ntBASIC2.1□□□□□ -2.07
NCKIPSDQ9NZQ3 AC019129.1-201ENST00000403786 261 ntBASIC2.1□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU6-710P-201ENST00000410424 105 ntBASIC2.1□□□□□ -2.07
NCKIPSDQ9NZQ3 RPL23AP7-203ENST00000449021 469 ntBASIC2.1□□□□□ -2.07
NCKIPSDQ9NZQ3 AL021397.1-201ENST00000451806 248 ntBASIC2.1□□□□□ -2.07
NCKIPSDQ9NZQ3 AC055731.1-201ENST00000474387 401 ntBASIC2.1□□□□□ -2.07
NCKIPSDQ9NZQ3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.1□□□□□ -2.07
NCKIPSDQ9NZQ3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.1□□□□□ -2.07
NCKIPSDQ9NZQ3 MIR3684-201ENST00000579779 74 ntBASIC2.1□□□□□ -2.07
NCKIPSDQ9NZQ3 snoU18.1-201ENST00000629629 71 ntBASIC2.1□□□□□ -2.07
NCKIPSDQ9NZQ3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.1□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU6-801P-201ENST00000364087 105 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms