Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 RPS27P1-201ENST00000450552 247 ntBASIC2.34□□□□□ -2.03
MKS1Q9NXB0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
MKS1Q9NXB0 AC127455.1-201ENST00000565496 145 ntBASIC2.34□□□□□ -2.03
MKS1Q9NXB0 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.34□□□□□ -2.03
MKS1Q9NXB0 AC141273.2-201ENST00000618989 130 ntBASIC2.34□□□□□ -2.03
MKS1Q9NXB0 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.34□□□□□ -2.03
MKS1Q9NXB0 ZNF658B-202ENST00000615961 3375 ntBASIC2.33□□□□□ -2.04
MKS1Q9NXB0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
MKS1Q9NXB0 AC100821.1-201ENST00000523153 2479 ntBASIC2.33□□□□□ -2.04
MKS1Q9NXB0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.33□□□□□ -2.04
MKS1Q9NXB0 AC068700.1-201ENST00000565862 3754 ntBASIC2.33□□□□□ -2.04
MKS1Q9NXB0 RNA5SP276-201ENST00000362580 94 ntBASIC2.33□□□□□ -2.04
MKS1Q9NXB0 RNY1-201ENST00000364228 113 ntBASIC2.33□□□□□ -2.04
MKS1Q9NXB0 Y_RNA.292-201ENST00000364904 97 ntBASIC2.33□□□□□ -2.04
MKS1Q9NXB0 RNU6-296P-201ENST00000384608 107 ntBASIC2.33□□□□□ -2.04
MKS1Q9NXB0 Y_RNA.552-201ENST00000384665 112 ntBASIC2.33□□□□□ -2.04
MKS1Q9NXB0 MIR520A-201ENST00000384862 85 ntBASIC2.33□□□□□ -2.04
MKS1Q9NXB0 RNA5SP100-201ENST00000410903 110 ntBASIC2.33□□□□□ -2.04
MKS1Q9NXB0 RNA5SP59-201ENST00000410922 110 ntBASIC2.33□□□□□ -2.04
MKS1Q9NXB0 AL606517.2-201ENST00000442855 241 ntBASIC2.33□□□□□ -2.04
MKS1Q9NXB0 SNORD116-28-201ENST00000516123 91 ntBASIC2.33□□□□□ -2.04
MKS1Q9NXB0 RNU6-1291P-201ENST00000516591 104 ntBASIC2.33□□□□□ -2.04
MKS1Q9NXB0 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.33□□□□□ -2.04
MKS1Q9NXB0 AC011604.1-201ENST00000545978 196 ntBASIC2.33□□□□□ -2.04
MKS1Q9NXB0 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.33□□□□□ -2.04
MKS1Q9NXB0 AC078938.1-201ENST00000620993 318 ntBASIC2.33□□□□□ -2.04
MKS1Q9NXB0 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.33□□□□□ -2.04
MKS1Q9NXB0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
MKS1Q9NXB0 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
MKS1Q9NXB0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
MKS1Q9NXB0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.33□□□□□ -2.04
MKS1Q9NXB0 SNORA80A-201ENST00000363922 136 ntBASIC2.32□□□□□ -2.04
MKS1Q9NXB0 Y_RNA.267-201ENST00000364679 109 ntBASIC2.32□□□□□ -2.04
MKS1Q9NXB0 SNORA36B-201ENST00000410438 131 ntBASIC2.32□□□□□ -2.04
MKS1Q9NXB0 AC245047.3-201ENST00000429428 127 ntBASIC2.32□□□□□ -2.04
MKS1Q9NXB0 AC233266.1-201ENST00000454518 96 ntBASIC2.32□□□□□ -2.04
MKS1Q9NXB0 AC104435.1-201ENST00000483483 166 ntBASIC2.32□□□□□ -2.04
MKS1Q9NXB0 RPL23AP54-201ENST00000495129 419 ntBASIC2.32□□□□□ -2.04
MKS1Q9NXB0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.32□□□□□ -2.04
MKS1Q9NXB0 GTF3AP2-201ENST00000557014 266 ntBASIC2.32□□□□□ -2.04
MKS1Q9NXB0 MIR4448-201ENST00000584360 86 ntBASIC2.32□□□□□ -2.04
MKS1Q9NXB0 AC011921.3-201ENST00000605540 361 ntBASIC2.32□□□□□ -2.04
MKS1Q9NXB0 AC242852.1-201ENST00000612151 96 ntBASIC2.32□□□□□ -2.04
MKS1Q9NXB0 AC244015.1-201ENST00000622301 99 ntBASIC2.32□□□□□ -2.04
MKS1Q9NXB0 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
MKS1Q9NXB0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
MKS1Q9NXB0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
MKS1Q9NXB0 MIRLET7G-201ENST00000362280 84 ntBASIC2.31□□□□□ -2.04
MKS1Q9NXB0 RNU6-1205P-201ENST00000363625 106 ntBASIC2.31□□□□□ -2.04
MKS1Q9NXB0 RNU6-144P-201ENST00000383951 107 ntBASIC2.31□□□□□ -2.04
MKS1Q9NXB0 RNU4-52P-201ENST00000384209 138 ntBASIC2.31□□□□□ -2.04
MKS1Q9NXB0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
MKS1Q9NXB0 AL158823.1-201ENST00000418441 478 ntBASIC2.31□□□□□ -2.04
MKS1Q9NXB0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.31□□□□□ -2.04
MKS1Q9NXB0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.31□□□□□ -2.04
MKS1Q9NXB0 AC026436.1-201ENST00000510537 270 ntBASIC2.31□□□□□ -2.04
MKS1Q9NXB0 AL358944.1-201ENST00000528537 144 ntBASIC2.31□□□□□ -2.04
MKS1Q9NXB0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.31□□□□□ -2.04
MKS1Q9NXB0 MIR5007-201ENST00000583098 95 ntBASIC2.31□□□□□ -2.04
MKS1Q9NXB0 AL096840.1-201ENST00000603287 93 ntBASIC2.31□□□□□ -2.04
MKS1Q9NXB0 MIR6766-201ENST00000622641 72 ntBASIC2.31□□□□□ -2.04
MKS1Q9NXB0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
MKS1Q9NXB0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
MKS1Q9NXB0 AL365361.1-201ENST00000566942 3481 ntBASIC2.3□□□□□ -2.04
MKS1Q9NXB0 Y_RNA.304-201ENST00000365011 112 ntBASIC2.3□□□□□ -2.04
MKS1Q9NXB0 RNY4P28-201ENST00000365281 93 ntBASIC2.3□□□□□ -2.04
MKS1Q9NXB0 Y_RNA.515-201ENST00000384535 112 ntBASIC2.3□□□□□ -2.04
MKS1Q9NXB0 AL512604.1-201ENST00000404812 257 ntBASIC2.3□□□□□ -2.04
MKS1Q9NXB0 RNU6-847P-201ENST00000411115 108 ntBASIC2.3□□□□□ -2.04
MKS1Q9NXB0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.3□□□□□ -2.04
MKS1Q9NXB0 AP002004.2-201ENST00000531656 154 ntBASIC2.3□□□□□ -2.04
MKS1Q9NXB0 AC009779.6-201ENST00000603972 165 ntBASIC2.3□□□□□ -2.04
MKS1Q9NXB0 AL033523.1-201ENST00000605153 153 ntBASIC2.3□□□□□ -2.04
MKS1Q9NXB0 AL627230.6-201ENST00000611129 280 ntBASIC2.3□□□□□ -2.04
MKS1Q9NXB0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
MKS1Q9NXB0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
MKS1Q9NXB0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
MKS1Q9NXB0 Y_RNA.257-201ENST00000364596 102 ntBASIC2.29□□□□□ -2.04
MKS1Q9NXB0 Y_RNA.293-201ENST00000364908 93 ntBASIC2.29□□□□□ -2.04
MKS1Q9NXB0 RNU2-52P-201ENST00000410680 190 ntBASIC2.29□□□□□ -2.04
MKS1Q9NXB0 RNU2-7P-201ENST00000410794 178 ntBASIC2.29□□□□□ -2.04
MKS1Q9NXB0 AC063976.3-201ENST00000426849 329 ntBASIC2.29□□□□□ -2.04
MKS1Q9NXB0 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.29□□□□□ -2.04
MKS1Q9NXB0 RNU6-437P-201ENST00000459408 95 ntBASIC2.29□□□□□ -2.04
MKS1Q9NXB0 COX6CP14-201ENST00000469580 174 ntBASIC2.29□□□□□ -2.04
MKS1Q9NXB0 MRPS17P9-201ENST00000511924 393 ntBASIC2.29□□□□□ -2.04
MKS1Q9NXB0 RNA5SP437-201ENST00000517249 129 ntBASIC2.29□□□□□ -2.04
MKS1Q9NXB0 AL929325.1-201ENST00000603096 117 ntBASIC2.29□□□□□ -2.04
MKS1Q9NXB0 MIR8054-201ENST00000620877 86 ntBASIC2.29□□□□□ -2.04
MKS1Q9NXB0 AL365265.1-201ENST00000621045 234 ntBASIC2.29□□□□□ -2.04
MKS1Q9NXB0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
MKS1Q9NXB0 AL359851.1-201ENST00000569460 4997 ntBASIC2.28□□□□□ -2.04
MKS1Q9NXB0 SNORA1B-201ENST00000362535 133 ntBASIC2.28□□□□□ -2.04
MKS1Q9NXB0 RNA5SP212-201ENST00000391223 107 ntBASIC2.28□□□□□ -2.04
MKS1Q9NXB0 Y_RNA.621-201ENST00000411065 96 ntBASIC2.28□□□□□ -2.04
MKS1Q9NXB0 AL139156.1-201ENST00000412785 841 ntBASIC2.28□□□□□ -2.04
MKS1Q9NXB0 RPL23AP63-201ENST00000498752 471 ntBASIC2.28□□□□□ -2.04
MKS1Q9NXB0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.28□□□□□ -2.04
MKS1Q9NXB0 RNA5SP356-201ENST00000515972 94 ntBASIC2.28□□□□□ -2.04
MKS1Q9NXB0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms