Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
ZCCHC3Q9NUD5 AC005176.2-201ENST00000596933 147 ntBASIC1.08□□□□□ -2.24
ZCCHC3Q9NUD5 AL357312.1-201ENST00000603879 298 ntBASIC1.08□□□□□ -2.24
ZCCHC3Q9NUD5 AL050343.2-201ENST00000607338 280 ntBASIC1.08□□□□□ -2.24
ZCCHC3Q9NUD5 U2.1-201ENST00000618978 145 ntBASIC1.08□□□□□ -2.24
ZCCHC3Q9NUD5 MTND4LP32-201ENST00000636111 270 ntBASIC1.08□□□□□ -2.24
ZCCHC3Q9NUD5 RNU4-79P-201ENST00000362764 141 ntBASIC1.07□□□□□ -2.24
ZCCHC3Q9NUD5 Y_RNA.314-201ENST00000365114 102 ntBASIC1.07□□□□□ -2.24
ZCCHC3Q9NUD5 RNU6-1283P-201ENST00000365314 105 ntBASIC1.07□□□□□ -2.24
ZCCHC3Q9NUD5 RNU6-20P-201ENST00000384106 107 ntBASIC1.07□□□□□ -2.24
ZCCHC3Q9NUD5 SNORD116-29-201ENST00000384516 83 ntBASIC1.07□□□□□ -2.24
ZCCHC3Q9NUD5 RNU6-482P-201ENST00000391068 107 ntBASIC1.07□□□□□ -2.24
ZCCHC3Q9NUD5 RNY4P36-201ENST00000391116 96 ntBASIC1.07□□□□□ -2.24
ZCCHC3Q9NUD5 MIR1285-1-201ENST00000408593 84 ntBASIC1.07□□□□□ -2.24
ZCCHC3Q9NUD5 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.07□□□□□ -2.24
ZCCHC3Q9NUD5 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.07□□□□□ -2.24
ZCCHC3Q9NUD5 AC245047.7-201ENST00000440265 293 ntBASIC1.07□□□□□ -2.24
ZCCHC3Q9NUD5 AL163540.1-201ENST00000485382 386 ntBASIC1.07□□□□□ -2.24
ZCCHC3Q9NUD5 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.07□□□□□ -2.24
ZCCHC3Q9NUD5 RNU6-1116P-201ENST00000517269 99 ntBASIC1.07□□□□□ -2.24
ZCCHC3Q9NUD5 MIR4298-201ENST00000584380 73 ntBASIC1.07□□□□□ -2.24
ZCCHC3Q9NUD5 AC104984.5-201ENST00000586878 94 ntBASIC1.07□□□□□ -2.24
ZCCHC3Q9NUD5 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
ZCCHC3Q9NUD5 RNU6-626P-201ENST00000363354 107 ntBASIC1.06□□□□□ -2.24
ZCCHC3Q9NUD5 Y_RNA.259-201ENST00000364619 101 ntBASIC1.06□□□□□ -2.24
ZCCHC3Q9NUD5 MIR628-201ENST00000385229 95 ntBASIC1.06□□□□□ -2.24
ZCCHC3Q9NUD5 RNU6-910P-201ENST00000390844 107 ntBASIC1.06□□□□□ -2.24
ZCCHC3Q9NUD5 MIR891A-201ENST00000401237 79 ntBASIC1.06□□□□□ -2.24
ZCCHC3Q9NUD5 RNU2-61P-201ENST00000411069 191 ntBASIC1.06□□□□□ -2.24
ZCCHC3Q9NUD5 AC104332.1-201ENST00000440471 797 ntBASIC1.06□□□□□ -2.24
ZCCHC3Q9NUD5 AC093852.1-201ENST00000503587 266 ntBASIC1.06□□□□□ -2.24
ZCCHC3Q9NUD5 MIR4659A-201ENST00000580269 81 ntBASIC1.06□□□□□ -2.24
ZCCHC3Q9NUD5 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.06□□□□□ -2.24
ZCCHC3Q9NUD5 UBE2V2P2-201ENST00000587677 504 ntBASIC1.06□□□□□ -2.24
ZCCHC3Q9NUD5 AC120024.3-201ENST00000603167 156 ntBASIC1.06□□□□□ -2.24
ZCCHC3Q9NUD5 HSPE1P19-201ENST00000603327 295 ntBASIC1.06□□□□□ -2.24
ZCCHC3Q9NUD5 AP000942.3-201ENST00000603702 160 ntBASIC1.06□□□□□ -2.24
ZCCHC3Q9NUD5 AC011476.5-201ENST00000615594 130 ntBASIC1.06□□□□□ -2.24
ZCCHC3Q9NUD5 AC027279.3-201ENST00000625055 122 ntBASIC1.06□□□□□ -2.24
ZCCHC3Q9NUD5 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.06□□□□□ -2.24
ZCCHC3Q9NUD5 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
ZCCHC3Q9NUD5 Y_RNA.27-201ENST00000362540 103 ntBASIC1.05□□□□□ -2.24
ZCCHC3Q9NUD5 RNU6-1040P-201ENST00000383974 107 ntBASIC1.05□□□□□ -2.24
ZCCHC3Q9NUD5 RNU6-1080P-201ENST00000383982 107 ntBASIC1.05□□□□□ -2.24
ZCCHC3Q9NUD5 Y_RNA.446-201ENST00000384178 104 ntBASIC1.05□□□□□ -2.24
ZCCHC3Q9NUD5 MIR222-201ENST00000384992 110 ntBASIC1.05□□□□□ -2.24
ZCCHC3Q9NUD5 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.05□□□□□ -2.24
ZCCHC3Q9NUD5 RPEP5-201ENST00000441137 268 ntBASIC1.05□□□□□ -2.24
ZCCHC3Q9NUD5 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.05□□□□□ -2.24
ZCCHC3Q9NUD5 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.05□□□□□ -2.24
ZCCHC3Q9NUD5 CYCTP-201ENST00000504253 315 ntBASIC1.05□□□□□ -2.24
ZCCHC3Q9NUD5 RNU6-436P-201ENST00000516171 114 ntBASIC1.05□□□□□ -2.24
ZCCHC3Q9NUD5 RNU6-947P-201ENST00000516264 106 ntBASIC1.05□□□□□ -2.24
ZCCHC3Q9NUD5 RNU6-699P-201ENST00000517081 110 ntBASIC1.05□□□□□ -2.24
ZCCHC3Q9NUD5 Y_RNA.718-201ENST00000517110 102 ntBASIC1.05□□□□□ -2.24
ZCCHC3Q9NUD5 AL132765.2-201ENST00000610812 351 ntBASIC1.05□□□□□ -2.24
ZCCHC3Q9NUD5 MIR6078-201ENST00000611069 100 ntBASIC1.05□□□□□ -2.24
ZCCHC3Q9NUD5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.05□□□□□ -2.24
ZCCHC3Q9NUD5 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.04□□□□□ -2.24
ZCCHC3Q9NUD5 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
ZCCHC3Q9NUD5 U8.5-201ENST00000364528 136 ntBASIC1.04□□□□□ -2.24
ZCCHC3Q9NUD5 Y_RNA.384-201ENST00000383909 102 ntBASIC1.04□□□□□ -2.24
ZCCHC3Q9NUD5 RNU6-708P-201ENST00000384217 107 ntBASIC1.04□□□□□ -2.24
ZCCHC3Q9NUD5 SNORD116-13-201ENST00000384408 92 ntBASIC1.04□□□□□ -2.24
ZCCHC3Q9NUD5 RNU6-1105P-201ENST00000384774 107 ntBASIC1.04□□□□□ -2.24
ZCCHC3Q9NUD5 MIR19B1-201ENST00000384829 87 ntBASIC1.04□□□□□ -2.24
ZCCHC3Q9NUD5 MIR526A1-201ENST00000384897 85 ntBASIC1.04□□□□□ -2.24
ZCCHC3Q9NUD5 SNORD12-201ENST00000391002 90 ntBASIC1.04□□□□□ -2.24
ZCCHC3Q9NUD5 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.04□□□□□ -2.24
ZCCHC3Q9NUD5 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.04□□□□□ -2.24
ZCCHC3Q9NUD5 CHEK2P4-201ENST00000450340 246 ntBASIC1.04□□□□□ -2.24
ZCCHC3Q9NUD5 RPL39P39-201ENST00000455840 151 ntBASIC1.04□□□□□ -2.24
ZCCHC3Q9NUD5 RNU6-155P-201ENST00000516347 100 ntBASIC1.04□□□□□ -2.24
ZCCHC3Q9NUD5 RNU6-966P-201ENST00000516479 104 ntBASIC1.04□□□□□ -2.24
ZCCHC3Q9NUD5 MIR4762-201ENST00000585261 75 ntBASIC1.04□□□□□ -2.24
ZCCHC3Q9NUD5 AL591926.4-201ENST00000616895 298 ntBASIC1.04□□□□□ -2.24
ZCCHC3Q9NUD5 U6.92-201ENST00000636464 89 ntBASIC1.04□□□□□ -2.24
ZCCHC3Q9NUD5 AL391987.6-201ENST00000305671 199 ntBASIC1.03□□□□□ -2.24
ZCCHC3Q9NUD5 SNORD68-201ENST00000363214 84 ntBASIC1.03□□□□□ -2.24
ZCCHC3Q9NUD5 Y_RNA.230-201ENST00000364348 109 ntBASIC1.03□□□□□ -2.24
ZCCHC3Q9NUD5 RNU6-163P-201ENST00000384396 106 ntBASIC1.03□□□□□ -2.24
ZCCHC3Q9NUD5 Y_RNA.621-201ENST00000411065 96 ntBASIC1.03□□□□□ -2.24
ZCCHC3Q9NUD5 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.03□□□□□ -2.24
ZCCHC3Q9NUD5 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.03□□□□□ -2.24
ZCCHC3Q9NUD5 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.03□□□□□ -2.24
ZCCHC3Q9NUD5 AC011604.1-201ENST00000545978 196 ntBASIC1.03□□□□□ -2.24
ZCCHC3Q9NUD5 AC005730.3-201ENST00000583067 366 ntBASIC1.03□□□□□ -2.24
ZCCHC3Q9NUD5 FAM106DP-201ENST00000586416 501 ntBASIC1.03□□□□□ -2.24
ZCCHC3Q9NUD5 AC022441.3-201ENST00000605737 136 ntBASIC1.03□□□□□ -2.24
ZCCHC3Q9NUD5 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.03□□□□□ -2.24
ZCCHC3Q9NUD5 MIR1302-1-201ENST00000637932 143 ntBASIC1.03□□□□□ -2.24
ZCCHC3Q9NUD5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.02□□□□□ -2.25
ZCCHC3Q9NUD5 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.02□□□□□ -2.25
ZCCHC3Q9NUD5 Y_RNA.172-201ENST00000363765 102 ntBASIC1.02□□□□□ -2.25
ZCCHC3Q9NUD5 Y_RNA.363-201ENST00000365529 113 ntBASIC1.02□□□□□ -2.25
ZCCHC3Q9NUD5 PIGPP3-201ENST00000425307 415 ntBASIC1.02□□□□□ -2.25
ZCCHC3Q9NUD5 AC096644.2-201ENST00000429278 159 ntBASIC1.02□□□□□ -2.25
ZCCHC3Q9NUD5 AC093019.1-201ENST00000443135 252 ntBASIC1.02□□□□□ -2.25
ZCCHC3Q9NUD5 LINC01399-202ENST00000458450 244 ntBASIC1.02□□□□□ -2.25
ZCCHC3Q9NUD5 AC114811.1-201ENST00000507207 168 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms