Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
HINT3Q9NQE9 SNORD114-1-201ENST00000362705 72 ntBASIC1.75□□□□□ -2.13
HINT3Q9NQE9 Y_RNA.310-201ENST00000365063 113 ntBASIC1.75□□□□□ -2.13
HINT3Q9NQE9 Y_RNA.341-201ENST00000365341 102 ntBASIC1.75□□□□□ -2.13
HINT3Q9NQE9 RNU6-326P-201ENST00000365480 107 ntBASIC1.75□□□□□ -2.13
HINT3Q9NQE9 Y_RNA.368-201ENST00000365547 113 ntBASIC1.75□□□□□ -2.13
HINT3Q9NQE9 Y_RNA.461-201ENST00000384263 103 ntBASIC1.75□□□□□ -2.13
HINT3Q9NQE9 MIR568-201ENST00000385036 95 ntBASIC1.75□□□□□ -2.13
HINT3Q9NQE9 MT-TW-201ENST00000387382 68 ntBASIC1.75□□□□□ -2.13
HINT3Q9NQE9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
HINT3Q9NQE9 RNU6-1248P-201ENST00000391096 64 ntBASIC1.75□□□□□ -2.13
HINT3Q9NQE9 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.75□□□□□ -2.13
HINT3Q9NQE9 MIR1302-6-201ENST00000408466 90 ntBASIC1.75□□□□□ -2.13
HINT3Q9NQE9 RNA5SP489-201ENST00000410986 109 ntBASIC1.75□□□□□ -2.13
HINT3Q9NQE9 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.75□□□□□ -2.13
HINT3Q9NQE9 AL445646.1-201ENST00000431784 216 ntBASIC1.75□□□□□ -2.13
HINT3Q9NQE9 MTCO1P5-201ENST00000433573 344 ntBASIC1.75□□□□□ -2.13
HINT3Q9NQE9 AL162725.1-201ENST00000435405 301 ntBASIC1.75□□□□□ -2.13
HINT3Q9NQE9 AL135790.2-201ENST00000437701 267 ntBASIC1.75□□□□□ -2.13
HINT3Q9NQE9 HSPE1P9-201ENST00000440046 311 ntBASIC1.75□□□□□ -2.13
HINT3Q9NQE9 RPS20P10-201ENST00000451209 253 ntBASIC1.75□□□□□ -2.13
HINT3Q9NQE9 AC091021.1-201ENST00000468051 388 ntBASIC1.75□□□□□ -2.13
HINT3Q9NQE9 RN7SL274P-201ENST00000492268 272 ntBASIC1.75□□□□□ -2.13
HINT3Q9NQE9 RNU6-191P-201ENST00000516295 94 ntBASIC1.75□□□□□ -2.13
HINT3Q9NQE9 RNU6-1338P-201ENST00000516328 91 ntBASIC1.75□□□□□ -2.13
HINT3Q9NQE9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.75□□□□□ -2.13
HINT3Q9NQE9 AC091178.2-201ENST00000584401 117 ntBASIC1.75□□□□□ -2.13
HINT3Q9NQE9 AC004832.4-201ENST00000608952 331 ntBASIC1.75□□□□□ -2.13
HINT3Q9NQE9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.75□□□□□ -2.13
HINT3Q9NQE9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.75□□□□□ -2.13
HINT3Q9NQE9 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HINT3Q9NQE9 Y_RNA.456-201ENST00000384232 111 ntBASIC1.74□□□□□ -2.13
HINT3Q9NQE9 RNU6-472P-201ENST00000384299 107 ntBASIC1.74□□□□□ -2.13
HINT3Q9NQE9 Y_RNA.483-201ENST00000384380 101 ntBASIC1.74□□□□□ -2.13
HINT3Q9NQE9 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.74□□□□□ -2.13
HINT3Q9NQE9 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.74□□□□□ -2.13
HINT3Q9NQE9 MTND4LP30-201ENST00000454092 297 ntBASIC1.74□□□□□ -2.13
HINT3Q9NQE9 snoU13.26-201ENST00000459452 105 ntBASIC1.74□□□□□ -2.13
HINT3Q9NQE9 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.74□□□□□ -2.13
HINT3Q9NQE9 RPL36AP21-201ENST00000490372 323 ntBASIC1.74□□□□□ -2.13
HINT3Q9NQE9 RNA5SP481-201ENST00000516814 122 ntBASIC1.74□□□□□ -2.13
HINT3Q9NQE9 DEFB108E-201ENST00000524692 240 ntBASIC1.74□□□□□ -2.13
HINT3Q9NQE9 MIR4713-201ENST00000582691 75 ntBASIC1.74□□□□□ -2.13
HINT3Q9NQE9 AL162730.1-201ENST00000605734 292 ntBASIC1.74□□□□□ -2.13
HINT3Q9NQE9 AC037487.3-201ENST00000606668 112 ntBASIC1.74□□□□□ -2.13
HINT3Q9NQE9 AL627230.6-201ENST00000611129 280 ntBASIC1.74□□□□□ -2.13
HINT3Q9NQE9 AP001282.2-201ENST00000616149 309 ntBASIC1.74□□□□□ -2.13
HINT3Q9NQE9 uc_338.20-201ENST00000621563 178 ntBASIC1.74□□□□□ -2.13
HINT3Q9NQE9 U6.104-201ENST00000637979 90 ntBASIC1.74□□□□□ -2.13
HINT3Q9NQE9 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
HINT3Q9NQE9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HINT3Q9NQE9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
HINT3Q9NQE9 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
HINT3Q9NQE9 RNU4-13P-201ENST00000364019 141 ntBASIC1.73□□□□□ -2.13
HINT3Q9NQE9 SNORA4.2-201ENST00000365313 147 ntBASIC1.73□□□□□ -2.13
HINT3Q9NQE9 Y_RNA.396-201ENST00000383949 103 ntBASIC1.73□□□□□ -2.13
HINT3Q9NQE9 MIR520G-201ENST00000385064 90 ntBASIC1.73□□□□□ -2.13
HINT3Q9NQE9 AC245047.3-201ENST00000429428 127 ntBASIC1.73□□□□□ -2.13
HINT3Q9NQE9 snoU13.15-201ENST00000459407 104 ntBASIC1.73□□□□□ -2.13
HINT3Q9NQE9 SERF1AP1-201ENST00000514575 187 ntBASIC1.73□□□□□ -2.13
HINT3Q9NQE9 RNU6-341P-201ENST00000516973 96 ntBASIC1.73□□□□□ -2.13
HINT3Q9NQE9 RNU6-1096P-201ENST00000517089 102 ntBASIC1.73□□□□□ -2.13
HINT3Q9NQE9 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.73□□□□□ -2.13
HINT3Q9NQE9 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HINT3Q9NQE9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.73□□□□□ -2.13
HINT3Q9NQE9 SNORA25.1-201ENST00000362326 128 ntBASIC1.72□□□□□ -2.13
HINT3Q9NQE9 RNU6-514P-201ENST00000384208 107 ntBASIC1.72□□□□□ -2.13
HINT3Q9NQE9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
HINT3Q9NQE9 AC019129.1-201ENST00000403786 261 ntBASIC1.72□□□□□ -2.13
HINT3Q9NQE9 RNU2-2P-201ENST00000410396 191 ntBASIC1.72□□□□□ -2.13
HINT3Q9NQE9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.72□□□□□ -2.13
HINT3Q9NQE9 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.72□□□□□ -2.13
HINT3Q9NQE9 RPS4XP11-201ENST00000446897 772 ntBASIC1.72□□□□□ -2.13
HINT3Q9NQE9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.72□□□□□ -2.13
HINT3Q9NQE9 AC091959.1-201ENST00000495857 238 ntBASIC1.72□□□□□ -2.13
HINT3Q9NQE9 SNORA31.10-201ENST00000516482 106 ntBASIC1.72□□□□□ -2.13
HINT3Q9NQE9 SCARNA24.2-201ENST00000516968 130 ntBASIC1.72□□□□□ -2.13
HINT3Q9NQE9 AC136628.3-201ENST00000521868 290 ntBASIC1.72□□□□□ -2.13
HINT3Q9NQE9 AL096840.1-201ENST00000603287 93 ntBASIC1.72□□□□□ -2.13
HINT3Q9NQE9 AC005972.2-201ENST00000604690 348 ntBASIC1.72□□□□□ -2.13
HINT3Q9NQE9 MIR8054-201ENST00000620877 86 ntBASIC1.72□□□□□ -2.13
HINT3Q9NQE9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.72□□□□□ -2.13
HINT3Q9NQE9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HINT3Q9NQE9 RNU6-801P-201ENST00000364087 105 ntBASIC1.71□□□□□ -2.14
HINT3Q9NQE9 Y_RNA.237-201ENST00000364439 102 ntBASIC1.71□□□□□ -2.14
HINT3Q9NQE9 Y_RNA.267-201ENST00000364679 109 ntBASIC1.71□□□□□ -2.14
HINT3Q9NQE9 MIR562-201ENST00000384894 95 ntBASIC1.71□□□□□ -2.14
HINT3Q9NQE9 RNU6-440P-201ENST00000390882 105 ntBASIC1.71□□□□□ -2.14
HINT3Q9NQE9 RNU6-360P-201ENST00000390944 104 ntBASIC1.71□□□□□ -2.14
HINT3Q9NQE9 MIR1302-3-201ENST00000408128 138 ntBASIC1.71□□□□□ -2.14
HINT3Q9NQE9 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.71□□□□□ -2.14
HINT3Q9NQE9 HMGN2P19-201ENST00000425149 265 ntBASIC1.71□□□□□ -2.14
HINT3Q9NQE9 snoU13.27-201ENST00000459278 104 ntBASIC1.71□□□□□ -2.14
HINT3Q9NQE9 MRPS17P9-201ENST00000511924 393 ntBASIC1.71□□□□□ -2.14
HINT3Q9NQE9 RNU6-1291P-201ENST00000516591 104 ntBASIC1.71□□□□□ -2.14
HINT3Q9NQE9 AL512605.2-201ENST00000592972 256 ntBASIC1.71□□□□□ -2.14
HINT3Q9NQE9 AC068647.2-201ENST00000637380 353 ntBASIC1.71□□□□□ -2.14
HINT3Q9NQE9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
HINT3Q9NQE9 AL391987.6-201ENST00000305671 199 ntBASIC1.7□□□□□ -2.14
HINT3Q9NQE9 Y_RNA.518-201ENST00000384552 113 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms